RNA–Protein interactions for RNA: ENST00000637278.1

CLN5-217, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 2

Gene CLN5, Length 2,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-217ENST00000637278 COL7A1Q02388 2944 aa4.86□□□□□ -1.63
CLN5-217ENST00000637278 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.85□□□□□ -1.63
CLN5-217ENST00000637278 C10orf55Q5SWW7 151 aa4.85□□□□□ -1.63
CLN5-217ENST00000637278 TYMSOSQ8TAI1 123 aa4.84□□□□□ -1.63
CLN5-217ENST00000637278 SMIM11BQ8TCY0 68 aa4.84□□□□□ -1.63
CLN5-217ENST00000637278 TENM3Q9P273 2699 aa4.84□□□□□ -1.63
CLN5-217ENST00000637278 APELAP0DMC3 54 aa4.84□□□□□ -1.63
CLN5-217ENST00000637278 NTM-AS1Q6ZSK4 140 aa4.84□□□□□ -1.63
CLN5-217ENST00000637278 COX7B2Q8TF08 81 aa4.83□□□□□ -1.64
CLN5-217ENST00000637278 PLAC8Q9NZF1 115 aa4.83□□□□□ -1.64
CLN5-217ENST00000637278 IGLV7-46A0A075B6I9 117 aa4.83□□□□□ -1.64
CLN5-217ENST00000637278 IGKV4-1P06312 121 aa4.83□□□□□ -1.64
CLN5-217ENST00000637278 PDE6GP18545 87 aa4.83□□□□□ -1.64
CLN5-217ENST00000637278 LINC00467Q9BRT7 94 aa4.82□□□□□ -1.64
CLN5-217ENST00000637278 CNBPP62633 177 aaKnown RBP4.82□□□□□ -1.64
CLN5-217ENST00000637278 LINC00612Q8N6U2 182 aa4.82□□□□□ -1.64
CLN5-217ENST00000637278 DNAH10OSP0CZ25 163 aa4.81□□□□□ -1.64
CLN5-217ENST00000637278 DNAH7Q8WXX0 4024 aa4.81□□□□□ -1.64
CLN5-217ENST00000637278 IGHV3-66A0A0C4DH42 116 aa4.81□□□□□ -1.64
CLN5-217ENST00000637278 ERHP84090 104 aaKnown RBP4.81□□□□□ -1.64
CLN5-217ENST00000637278 KRTAP25-1Q3LHN0 102 aa4.81□□□□□ -1.64
CLN5-217ENST00000637278 COA5Q86WW8 74 aa4.81□□□□□ -1.64
CLN5-217ENST00000637278 C16orf74Q96GX8 76 aa4.81□□□□□ -1.64
CLN5-217ENST00000637278 HUWE1Q7Z6Z7 4374 aaKnown RBP4.81□□□□□ -1.64
CLN5-217ENST00000637278 KMT2CQ8NEZ4 4911 aaKnown RBP4.81□□□□□ -1.64
CLN5-217ENST00000637278 IGKV1D-37A0A075B6S9 117 aa4.8□□□□□ -1.64
CLN5-217ENST00000637278 LINC00959A0A1B0GUT2 108 aa4.8□□□□□ -1.64
CLN5-217ENST00000637278 PRCDQ00LT1 54 aa4.8□□□□□ -1.64
CLN5-217ENST00000637278 LENEPQ9Y5L5 61 aa4.8□□□□□ -1.64
CLN5-217ENST00000637278 H0Y9P7 68 aa4.8□□□□□ -1.64
CLN5-217ENST00000637278 WT1-ASQ06250 92 aa4.8□□□□□ -1.64
CLN5-217ENST00000637278 K7EIM0 57 aa4.79□□□□□ -1.64
CLN5-217ENST00000637278 ST20-AS1Q8NBB2 130 aa4.79□□□□□ -1.64
CLN5-217ENST00000637278 ALMS1Q8TCU4 4167 aa4.79□□□□□ -1.64
CLN5-217ENST00000637278 LOC110117498A0A087WWA1 95 aa4.79□□□□□ -1.64
CLN5-217ENST00000637278 TRBV6-4A0A1B0GX49 114 aa4.79□□□□□ -1.64
CLN5-217ENST00000637278 STAB2Q8WWQ8 2551 aa4.79□□□□□ -1.64
CLN5-217ENST00000637278 TRGV2A0A075B6R0 118 aa4.78□□□□□ -1.64
CLN5-217ENST00000637278 IGKV2-40A0A087WW87 121 aaPredicted RBP4.78□□□□□ -1.64
CLN5-217ENST00000637278 TRGV4A0A0C4DH28 118 aa4.78□□□□□ -1.64
CLN5-217ENST00000637278 I3L2K1 104 aa4.78□□□□□ -1.64
CLN5-217ENST00000637278 IGKV2D-40P01614 121 aaPredicted RBP4.78□□□□□ -1.64
CLN5-217ENST00000637278 RYR3Q15413 4870 aa4.78□□□□□ -1.64
CLN5-217ENST00000637278 A0A0J9YWU9 116 aa4.78□□□□□ -1.64
CLN5-217ENST00000637278 NDUFA1O15239 70 aa4.78□□□□□ -1.64
CLN5-217ENST00000637278 C15orf56Q8N910 161 aa4.78□□□□□ -1.64
CLN5-217ENST00000637278 RHPN1-AS1Q9BWJ2 59 aa4.78□□□□□ -1.64
CLN5-217ENST00000637278 PRR34Q9NV39 138 aa4.78□□□□□ -1.64
CLN5-217ENST00000637278 DNAH1Q9P2D7 4330 aa4.77□□□□□ -1.65
CLN5-217ENST00000637278 SPANXA2-OT1Q8N9U9 137 aa4.77□□□□□ -1.65
CLN5-217ENST00000637278 RYR2Q92736 4967 aa4.77□□□□□ -1.65
CLN5-217ENST00000637278 DEFB135Q30KP9 77 aa4.77□□□□□ -1.65
CLN5-217ENST00000637278 ETDCA0A1B0GVM5 59 aa4.76□□□□□ -1.65
CLN5-217ENST00000637278 LY6G6CO95867 125 aa4.75□□□□□ -1.65
CLN5-217ENST00000637278 PDE6HQ13956 83 aa4.75□□□□□ -1.65
CLN5-217ENST00000637278 IGKV2-28A0A075B6P5 120 aa4.75□□□□□ -1.65
CLN5-217ENST00000637278 IGKV2D-28P01615 120 aa4.75□□□□□ -1.65
CLN5-217ENST00000637278 LYZP61626 148 aa4.75□□□□□ -1.65
CLN5-217ENST00000637278 NBEAL2Q6ZNJ1 2754 aa4.75□□□□□ -1.65
CLN5-217ENST00000637278 IGKV3OR2-268A0A0C4DH90 116 aa4.74□□□□□ -1.65
CLN5-217ENST00000637278 LINC00158P58513 81 aa4.73□□□□□ -1.65
CLN5-217ENST00000637278 POLR2KP53803 58 aaKnown RBP4.73□□□□□ -1.65
CLN5-217ENST00000637278 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.73□□□□□ -1.65
CLN5-217ENST00000637278 CAMK2N1Q7Z7J9 78 aa4.73□□□□□ -1.65
CLN5-217ENST00000637278 C9orf163Q8N9P6 203 aa4.73□□□□□ -1.65
CLN5-217ENST00000637278 DEFB131AP59861 70 aa4.72□□□□□ -1.65
CLN5-217ENST00000637278 ZNF861PO60384 105 aa4.71□□□□□ -1.65
CLN5-217ENST00000637278 KRTAP26-1Q6PEX3 210 aa4.71□□□□□ -1.65
CLN5-217ENST00000637278 LYSTQ99698 3801 aa4.71□□□□□ -1.65
CLN5-217ENST00000637278 BIRC6Q9NR09 4857 aa4.71□□□□□ -1.66
CLN5-217ENST00000637278 SACSQ9NZJ4 4579 aa4.71□□□□□ -1.66
CLN5-217ENST00000637278 CCL18P55774 89 aa4.71□□□□□ -1.66
CLN5-217ENST00000637278 CHCHD7Q9BUK0 85 aa4.71□□□□□ -1.66
CLN5-217ENST00000637278 IGKV3-7A0A075B6H7 116 aa4.71□□□□□ -1.66
CLN5-217ENST00000637278 IGLV10-54A0A075B6I4 117 aa4.71□□□□□ -1.66
CLN5-217ENST00000637278 SPINT4Q6UDR6 99 aa4.7□□□□□ -1.66
CLN5-217ENST00000637278 TENM2Q9NT68 2774 aa4.69□□□□□ -1.66
CLN5-217ENST00000637278 STARD9Q9P2P6 4700 aa4.69□□□□□ -1.66
CLN5-217ENST00000637278 H3BPC8 53 aa4.69□□□□□ -1.66
CLN5-217ENST00000637278 APLNQ9ULZ1 77 aa4.69□□□□□ -1.66
CLN5-217ENST00000637278 SPATA8Q6RVD6 105 aa4.69□□□□□ -1.66
CLN5-217ENST00000637278 SPRR4Q96PI1 79 aa4.69□□□□□ -1.66
CLN5-217ENST00000637278 CDKN2A-AS1Q9UH64 79 aa4.68□□□□□ -1.66
CLN5-217ENST00000637278 SPART-AS1P0CW21 52 aa4.67□□□□□ -1.66
CLN5-217ENST00000637278 KCNQ1DNQ9H478 68 aa4.67□□□□□ -1.66
CLN5-217ENST00000637278 A0A087WSZ3 146 aa4.67□□□□□ -1.66
CLN5-217ENST00000637278 CSMD3Q7Z407 3707 aa4.66□□□□□ -1.66
CLN5-217ENST00000637278 IGLV1-50A0A075B6I6 118 aa4.66□□□□□ -1.66
CLN5-217ENST00000637278 DEFB131BA0A096LNP1 70 aa4.66□□□□□ -1.66
CLN5-217ENST00000637278 A8MTW9 85 aa4.66□□□□□ -1.66
CLN5-217ENST00000637278 PLECQ15149 4684 aaKnown RBP4.65□□□□□ -1.67
CLN5-217ENST00000637278 C1orf137Q5JT78 98 aa4.65□□□□□ -1.67
CLN5-217ENST00000637278 DNAH6Q9C0G6 4158 aa4.64□□□□□ -1.67
CLN5-217ENST00000637278 H3BQ85 93 aa4.64□□□□□ -1.67
CLN5-217ENST00000637278 KLK12Q9UKR0 248 aa4.64□□□□□ -1.67
CLN5-217ENST00000637278 H3BRN7 92 aa4.63□□□□□ -1.67
CLN5-217ENST00000637278 DEFB4AO15263 64 aa4.63□□□□□ -1.67
CLN5-217ENST00000637278 UBE2DNLQ8IWF7 75 aa4.63□□□□□ -1.67
CLN5-217ENST00000637278 DMAC1Q96GE9 116 aa4.63□□□□□ -1.67
CLN5-217ENST00000637278 A0A1B0GUV1 79 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms