RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 LAMTOR3Q9UHA4 124 aa12.78□□□□□ -0.36
CLN8-213ENST00000637156 A0A1B0GV72 72 aa12.78□□□□□ -0.36
CLN8-213ENST00000637156 C3orf22Q8N5N4 141 aa12.78□□□□□ -0.36
CLN8-213ENST00000637156 NDUFV3P56181 108 aaKnown RBP12.77□□□□□ -0.37
CLN8-213ENST00000637156 GAGE2AQ6NT46 116 aa12.76□□□□□ -0.37
CLN8-213ENST00000637156 SMIM29Q86T20 159 aa12.76□□□□□ -0.37
CLN8-213ENST00000637156 JMJD7-PLA2G4BH0Y9G9 81 aa12.74□□□□□ -0.37
CLN8-213ENST00000637156 LINC00643Q86TS7 51 aa12.74□□□□□ -0.37
CLN8-213ENST00000637156 TRBV7-7A0A0K0K1E9 115 aa12.73□□□□□ -0.37
CLN8-213ENST00000637156 SPRR1BP22528 89 aa12.73□□□□□ -0.37
CLN8-213ENST00000637156 IMUPQ9GZP8 106 aa12.73□□□□□ -0.37
CLN8-213ENST00000637156 SPRR4Q96PI1 79 aa12.72□□□□□ -0.37
CLN8-213ENST00000637156 C14orf132Q9NPU4 83 aa12.72□□□□□ -0.37
CLN8-213ENST00000637156 RBM3P98179 157 aaKnown RBP12.72□□□□□ -0.37
CLN8-213ENST00000637156 RPL37AP61513 92 aaKnown RBP12.71□□□□□ -0.37
CLN8-213ENST00000637156 HSPG2P98160 4391 aa12.69□□□□□ -0.38
CLN8-213ENST00000637156 CDK2AP2O75956 126 aa12.68□□□□□ -0.38
CLN8-213ENST00000637156 LINC00483Q53H64 154 aa12.67□□□□□ -0.38
CLN8-213ENST00000637156 RYR1P21817 5038 aa12.67□□□□□ -0.38
CLN8-213ENST00000637156 KRTAP10-4P60372 401 aaPredicted RBP12.66□□□□□ -0.38
CLN8-213ENST00000637156 ANAPC11Q9NYG5 84 aa12.66□□□□□ -0.38
CLN8-213ENST00000637156 ZNF706Q9Y5V0 76 aaPredicted RBP12.66□□□□□ -0.38
CLN8-213ENST00000637156 KIAA1109Q2LD37 5005 aa12.64□□□□□ -0.39
CLN8-213ENST00000637156 TRBV7-4A0A0J9YYF1 115 aa12.63□□□□□ -0.39
CLN8-213ENST00000637156 DSCR8Q96T75 97 aa12.63□□□□□ -0.39
CLN8-213ENST00000637156 CCKP06307 115 aa12.63□□□□□ -0.39
CLN8-213ENST00000637156 ANAPC13Q9BS18 74 aa12.61□□□□□ -0.39
CLN8-213ENST00000637156 LOC110117498A0A087WWA1 95 aa12.61□□□□□ -0.39
CLN8-213ENST00000637156 Q6ZQT0 140 aa12.61□□□□□ -0.39
CLN8-213ENST00000637156 IGLV8-61A0A075B6I0 122 aa12.58□□□□□ -0.4
CLN8-213ENST00000637156 F8WEM9 126 aa12.58□□□□□ -0.4
CLN8-213ENST00000637156 SPINK6Q6UWN8 80 aa12.57□□□□□ -0.4
CLN8-213ENST00000637156 A0A0G2JQZ4 141 aa12.57□□□□□ -0.4
CLN8-213ENST00000637156 PDE6GP18545 87 aa12.55□□□□□ -0.4
CLN8-213ENST00000637156 KRTAP17-1Q9BYP8 105 aa12.55□□□□□ -0.4
CLN8-213ENST00000637156 IGLV9-49A0A0B4J1Y8 123 aa12.55□□□□□ -0.4
CLN8-213ENST00000637156 Q6JHZ5 121 aa12.55□□□□□ -0.4
CLN8-213ENST00000637156 LINC00846Q9NV44 126 aa12.55□□□□□ -0.4
CLN8-213ENST00000637156 FAM229AH3BQW9 127 aa12.54□□□□□ -0.4
CLN8-213ENST00000637156 KRTAP1-4P0C5Y4 121 aa12.54□□□□□ -0.4
CLN8-213ENST00000637156 IGFL1Q6UW32 110 aa12.53□□□□□ -0.4
CLN8-213ENST00000637156 A0A1W2PNM2 257 aa12.51□□□□□ -0.41
CLN8-213ENST00000637156 PLA2G1BP04054 148 aaKnown RBP12.51□□□□□ -0.41
CLN8-213ENST00000637156 A0A087X002 238 aa12.49□□□□□ -0.41
CLN8-213ENST00000637156 Q5VSD8 79 aa12.48□□□□□ -0.41
CLN8-213ENST00000637156 ATP5EP2Q5VTU8 51 aa12.48□□□□□ -0.41
CLN8-213ENST00000637156 C9orf153Q5TBE3 101 aa12.48□□□□□ -0.41
CLN8-213ENST00000637156 MOBPQ13875 183 aa12.46□□□□□ -0.41
CLN8-213ENST00000637156 FAM229BQ4G0N7 80 aa12.46□□□□□ -0.42
CLN8-213ENST00000637156 FAM236AA0A1B0GUQ0 79 aa12.44□□□□□ -0.42
CLN8-213ENST00000637156 FAM236BA0A1B0GV22 79 aa12.44□□□□□ -0.42
CLN8-213ENST00000637156 KRTAP13-2Q52LG2 175 aa12.44□□□□□ -0.42
CLN8-213ENST00000637156 Q8NBF4 154 aa12.44□□□□□ -0.42
CLN8-213ENST00000637156 UBL5Q9BZL1 73 aa12.44□□□□□ -0.42
CLN8-213ENST00000637156 CRYGAP11844 174 aa12.42□□□□□ -0.42
CLN8-213ENST00000637156 Q8N1X5 172 aa12.41□□□□□ -0.42
CLN8-213ENST00000637156 HIST1H4AP62805 103 aaKnown RBP12.4□□□□□ -0.42
CLN8-213ENST00000637156 SSBP3-AS1Q7Z2R9 100 aa12.39□□□□□ -0.43
CLN8-213ENST00000637156 IGKV3D-7A0A0C4DH55 119 aa12.36□□□□□ -0.43
CLN8-213ENST00000637156 PKHD1L1Q86WI1 4243 aa12.36□□□□□ -0.43
CLN8-213ENST00000637156 A0A1B0GW54 56 aa12.36□□□□□ -0.43
CLN8-213ENST00000637156 ATOX1O00244 68 aa12.36□□□□□ -0.43
CLN8-213ENST00000637156 PRR26Q8N8Z3 221 aa12.34□□□□□ -0.43
CLN8-213ENST00000637156 HRCT1Q6UXD1 115 aa12.34□□□□□ -0.43
CLN8-213ENST00000637156 BIRC6Q9NR09 4857 aa12.33□□□□□ -0.44
CLN8-213ENST00000637156 LRP1Q07954 4544 aaKnown RBP12.32□□□□□ -0.44
CLN8-213ENST00000637156 A0A087WSZ3 146 aa12.31□□□□□ -0.44
CLN8-213ENST00000637156 CCDC179H3BU77 68 aa12.31□□□□□ -0.44
CLN8-213ENST00000637156 TYMSOSQ8TAI1 123 aa12.29□□□□□ -0.44
CLN8-213ENST00000637156 Q6ZVQ6 151 aa12.29□□□□□ -0.44
CLN8-213ENST00000637156 UQCRQO14949 82 aa12.27□□□□□ -0.44
CLN8-213ENST00000637156 CXCL6P80162 114 aa12.27□□□□□ -0.45
CLN8-213ENST00000637156 NREPQ16612 68 aa12.26□□□□□ -0.45
CLN8-213ENST00000637156 CD164Q04900 197 aa12.24□□□□□ -0.45
CLN8-213ENST00000637156 COX7CP15954 63 aa12.23□□□□□ -0.45
CLN8-213ENST00000637156 KRTAP4-5Q9BYR2 181 aa12.23□□□□□ -0.45
CLN8-213ENST00000637156 A0A087WVE0 104 aa12.22□□□□□ -0.45
CLN8-213ENST00000637156 MYCBP2O75592 4640 aa12.2□□□□□ -0.46
CLN8-213ENST00000637156 FAT3Q8TDW7 4589 aa12.2□□□□□ -0.46
CLN8-213ENST00000637156 SERP2Q8N6R1 65 aa12.19□□□□□ -0.46
CLN8-213ENST00000637156 FLG2Q5D862 2391 aaPredicted RBP12.18□□□□□ -0.46
CLN8-213ENST00000637156 HERC2O95714 4834 aa12.17□□□□□ -0.46
CLN8-213ENST00000637156 LINC00472Q9H8W2 130 aa12.16□□□□□ -0.46
CLN8-213ENST00000637156 TNXBP22105 4242 aa12.16□□□□□ -0.46
CLN8-213ENST00000637156 KRTAP10-8P60410 259 aa12.15□□□□□ -0.46
CLN8-213ENST00000637156 DEFB116Q30KQ4 102 aa12.15□□□□□ -0.46
CLN8-213ENST00000637156 C4orf48Q5BLP8 95 aa12.14□□□□□ -0.47
CLN8-213ENST00000637156 LINC00304Q8N9R0 145 aa12.14□□□□□ -0.47
CLN8-213ENST00000637156 SS18L2Q9UHA2 77 aa12.12□□□□□ -0.47
CLN8-213ENST00000637156 SPINK1P00995 79 aa12.12□□□□□ -0.47
CLN8-213ENST00000637156 Q96NJ1 140 aa12.12□□□□□ -0.47
CLN8-213ENST00000637156 BPY2O14599 106 aa12.11□□□□□ -0.47
CLN8-213ENST00000637156 Q5XG85 94 aa12.1□□□□□ -0.47
CLN8-213ENST00000637156 SPAG11AQ6PDA7 123 aa12.1□□□□□ -0.47
CLN8-213ENST00000637156 SMIM20Q8N5G0 67 aa12.1□□□□□ -0.47
CLN8-213ENST00000637156 ABCA13Q86UQ4 5058 aa12.07□□□□□ -0.48
CLN8-213ENST00000637156 DSCR10P59022 87 aa12.06□□□□□ -0.48
CLN8-213ENST00000637156 ASB16-AS1Q495Z4 193 aa12.06□□□□□ -0.48
CLN8-213ENST00000637156 Q8N9L7 120 aa12.04□□□□□ -0.48
CLN8-213ENST00000637156 RPS29P62273 56 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms