RNA–Protein interactions for RNA: ENST00000636238.1

CIITA-214, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-214ENST00000636238 BAALC-AS2P0C853 105 aa4.46□□□□□ -1.7
CIITA-214ENST00000636238 FAM19A1Q7Z5A9 133 aa4.46□□□□□ -1.7
CIITA-214ENST00000636238 ANKRD29Q8N6D5 301 aa4.45□□□□□ -1.7
CIITA-214ENST00000636238 Q9BRP9 147 aa4.45□□□□□ -1.7
CIITA-214ENST00000636238 A0A1B0GX51 115 aa4.44□□□□□ -1.7
CIITA-214ENST00000636238 H0Y9J4 135 aa4.44□□□□□ -1.7
CIITA-214ENST00000636238 ERC2-IT1O76042 136 aa4.44□□□□□ -1.7
CIITA-214ENST00000636238 SNCGO76070 127 aa4.44□□□□□ -1.7
CIITA-214ENST00000636238 PRLHP81277 87 aa4.44□□□□□ -1.7
CIITA-214ENST00000636238 ETDBQ3ZM63 59 aa4.44□□□□□ -1.7
CIITA-214ENST00000636238 Q6ZRX8 168 aa4.44□□□□□ -1.7
CIITA-214ENST00000636238 H3BT86 120 aa4.43□□□□□ -1.7
CIITA-214ENST00000636238 IGLV7-43P04211 117 aa4.43□□□□□ -1.7
CIITA-214ENST00000636238 PRR4Q16378 134 aa4.43□□□□□ -1.7
CIITA-214ENST00000636238 Q6ZQY7 126 aa4.43□□□□□ -1.7
CIITA-214ENST00000636238 PRR26Q8N8Z3 221 aa4.43□□□□□ -1.7
CIITA-214ENST00000636238 DEFB105AQ8NG35 78 aa4.43□□□□□ -1.7
CIITA-214ENST00000636238 ORMDL1Q9P0S3 153 aa4.43□□□□□ -1.7
CIITA-214ENST00000636238 A0A1B0GV72 72 aa4.42□□□□□ -1.7
CIITA-214ENST00000636238 BCE1O60756 84 aa4.42□□□□□ -1.7
CIITA-214ENST00000636238 UBE2AP49459 152 aa4.42□□□□□ -1.7
CIITA-214ENST00000636238 C1orf137Q5JT78 98 aa4.42□□□□□ -1.7
CIITA-214ENST00000636238 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.42□□□□□ -1.7
CIITA-214ENST00000636238 ST20-AS1Q8NBB2 130 aa4.42□□□□□ -1.7
CIITA-214ENST00000636238 SMCR5Q8TEV8 140 aa4.42□□□□□ -1.7
CIITA-214ENST00000636238 HIGD2AQ9BW72 106 aa4.42□□□□□ -1.7
CIITA-214ENST00000636238 DHRS4-AS1Q9P1J3 65 aa4.42□□□□□ -1.7
CIITA-214ENST00000636238 MUC17Q685J3 4493 aa4.41□□□□□ -1.7
CIITA-214ENST00000636238 TEN1Q86WV5 123 aa4.41□□□□□ -1.7
CIITA-214ENST00000636238 TEX49A0A1B0GTD5 131 aa4.4□□□□□ -1.71
CIITA-214ENST00000636238 KRTAP1-4P0C5Y4 121 aa4.4□□□□□ -1.71
CIITA-214ENST00000636238 TMEM256-PLSCR3K7ERE1 68 aa4.39□□□□□ -1.71
CIITA-214ENST00000636238 LINC01547P58512 204 aaPredicted RBP4.39□□□□□ -1.71
CIITA-214ENST00000636238 KRTAP13-1Q8IUC0 172 aa4.39□□□□□ -1.71
CIITA-214ENST00000636238 Q8N377 158 aa4.39□□□□□ -1.71
CIITA-214ENST00000636238 OCIAD2Q56VL3 154 aa4.38□□□□□ -1.71
CIITA-214ENST00000636238 PPDPFLQ8WWR9 84 aa4.38□□□□□ -1.71
CIITA-214ENST00000636238 LAMTOR3Q9UHA4 124 aa4.38□□□□□ -1.71
CIITA-214ENST00000636238 C3orf22Q8N5N4 141 aa4.37□□□□□ -1.71
CIITA-214ENST00000636238 IGLV5-48A0A075B6I7 105 aa4.36□□□□□ -1.71
CIITA-214ENST00000636238 H3BQ85 93 aa4.36□□□□□ -1.71
CIITA-214ENST00000636238 ZNF861PO60384 105 aa4.36□□□□□ -1.71
CIITA-214ENST00000636238 NDUFV3P56181 108 aaKnown RBP4.36□□□□□ -1.71
CIITA-214ENST00000636238 GAGE2AQ6NT46 116 aa4.36□□□□□ -1.71
CIITA-214ENST00000636238 C14orf132Q9NPU4 83 aa4.36□□□□□ -1.71
CIITA-214ENST00000636238 TPRXLQ17RH7 258 aa4.35□□□□□ -1.71
CIITA-214ENST00000636238 OBSCN-AS1Q96MR7 158 aa4.35□□□□□ -1.71
CIITA-214ENST00000636238 CDIP1Q9H305 208 aa4.35□□□□□ -1.71
CIITA-214ENST00000636238 RBM3P98179 157 aaKnown RBP4.34□□□□□ -1.71
CIITA-214ENST00000636238 SMIM29Q86T20 159 aa4.34□□□□□ -1.71
CIITA-214ENST00000636238 SPRR4Q96PI1 79 aa4.34□□□□□ -1.71
CIITA-214ENST00000636238 JMJD7-PLA2G4BH0Y9G9 81 aa4.33□□□□□ -1.72
CIITA-214ENST00000636238 K7ERU9 68 aa4.33□□□□□ -1.72
CIITA-214ENST00000636238 ANAPC11Q9NYG5 84 aa4.33□□□□□ -1.72
CIITA-214ENST00000636238 CRCT1Q9UGL9 99 aa4.33□□□□□ -1.72
CIITA-214ENST00000636238 A0A0G2JQZ4 141 aa4.32□□□□□ -1.72
CIITA-214ENST00000636238 SPRR1BP22528 89 aa4.32□□□□□ -1.72
CIITA-214ENST00000636238 J3QR89 54 aa4.31□□□□□ -1.72
CIITA-214ENST00000636238 CRYGAP11844 174 aa4.31□□□□□ -1.72
CIITA-214ENST00000636238 Q6ZQT0 140 aa4.31□□□□□ -1.72
CIITA-214ENST00000636238 DSCR8Q96T75 97 aa4.31□□□□□ -1.72
CIITA-214ENST00000636238 LOC110117498A0A087WWA1 95 aa4.3□□□□□ -1.72
CIITA-214ENST00000636238 IGLV9-49A0A0B4J1Y8 123 aa4.3□□□□□ -1.72
CIITA-214ENST00000636238 F8WEM9 126 aa4.3□□□□□ -1.72
CIITA-214ENST00000636238 CCKP06307 115 aa4.3□□□□□ -1.72
CIITA-214ENST00000636238 VPS25Q9BRG1 176 aa4.3□□□□□ -1.72
CIITA-214ENST00000636238 ZNF706Q9Y5V0 76 aaPredicted RBP4.3□□□□□ -1.72
CIITA-214ENST00000636238 TRBV7-4A0A0J9YYF1 115 aa4.29□□□□□ -1.72
CIITA-214ENST00000636238 LINC00483Q53H64 154 aa4.29□□□□□ -1.72
CIITA-214ENST00000636238 TYMSOSQ8TAI1 123 aa4.29□□□□□ -1.72
CIITA-214ENST00000636238 FSIP2Q5CZC0 6907 aa4.29□□□□□ -1.72
CIITA-214ENST00000636238 FAM229BQ4G0N7 80 aa4.28□□□□□ -1.72
CIITA-214ENST00000636238 C9orf153Q5TBE3 101 aa4.28□□□□□ -1.72
CIITA-214ENST00000636238 IGFL1Q6UW32 110 aa4.28□□□□□ -1.72
CIITA-214ENST00000636238 IGLV8-61A0A075B6I0 122 aa4.27□□□□□ -1.73
CIITA-214ENST00000636238 IGLV7-46A0A075B6I9 117 aa4.27□□□□□ -1.73
CIITA-214ENST00000636238 A0A1W2PNM2 257 aa4.27□□□□□ -1.73
CIITA-214ENST00000636238 MOBPQ13875 183 aa4.27□□□□□ -1.73
CIITA-214ENST00000636238 PDE6GP18545 87 aa4.26□□□□□ -1.73
CIITA-214ENST00000636238 FP248Q71RG6 208 aaPredicted RBP4.26□□□□□ -1.73
CIITA-214ENST00000636238 LINC00846Q9NV44 126 aa4.26□□□□□ -1.73
CIITA-214ENST00000636238 A0A087X002 238 aa4.25□□□□□ -1.73
CIITA-214ENST00000636238 FAM240AA0A1B0GVK7 77 aa4.25□□□□□ -1.73
CIITA-214ENST00000636238 ACYP1P07311 99 aa4.25□□□□□ -1.73
CIITA-214ENST00000636238 HRCT1Q6UXD1 115 aa4.25□□□□□ -1.73
CIITA-214ENST00000636238 LINC00304Q8N9R0 145 aa4.25□□□□□ -1.73
CIITA-214ENST00000636238 ASB16-AS1Q495Z4 193 aa4.24□□□□□ -1.73
CIITA-214ENST00000636238 KRTAP13-2Q52LG2 175 aa4.24□□□□□ -1.73
CIITA-214ENST00000636238 Q6JHZ5 121 aa4.24□□□□□ -1.73
CIITA-214ENST00000636238 Q8NBF4 154 aa4.24□□□□□ -1.73
CIITA-214ENST00000636238 SPAG11AQ6PDA7 123 aa4.23□□□□□ -1.73
CIITA-214ENST00000636238 IGKV3D-7A0A0C4DH55 119 aa4.21□□□□□ -1.74
CIITA-214ENST00000636238 MT-ATP8P03928 68 aa4.21□□□□□ -1.74
CIITA-214ENST00000636238 SEC61BP60468 96 aaKnown RBP4.21□□□□□ -1.74
CIITA-214ENST00000636238 Q6ZVQ6 151 aa4.21□□□□□ -1.74
CIITA-214ENST00000636238 A0A087WSZ3 146 aa4.2□□□□□ -1.74
CIITA-214ENST00000636238 SSBP3-AS1Q7Z2R9 100 aa4.2□□□□□ -1.74
CIITA-214ENST00000636238 RETNLBQ9BQ08 111 aa4.2□□□□□ -1.74
CIITA-214ENST00000636238 UBL5Q9BZL1 73 aa4.2□□□□□ -1.74
CIITA-214ENST00000636238 TRBV7-7A0A0K0K1E9 115 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms