RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 HIST1H4GQ99525 98 aa9.71□□□□□ -0.86
PNKP-225ENST00000636214 BVES-AS1Q5T3Y7 98 aa9.69□□□□□ -0.86
PNKP-225ENST00000636214 C12orf57Q99622 126 aa9.69□□□□□ -0.86
PNKP-225ENST00000636214 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.67□□□□□ -0.86
PNKP-225ENST00000636214 CLEC2BQ92478 149 aa9.67□□□□□ -0.86
PNKP-225ENST00000636214 SNCGO76070 127 aa9.65□□□□□ -0.86
PNKP-225ENST00000636214 SNHG12Q9BXW3 62 aa9.65□□□□□ -0.86
PNKP-225ENST00000636214 RPL37P61927 97 aaKnown RBP9.64□□□□□ -0.87
PNKP-225ENST00000636214 OCIAD2Q56VL3 154 aa9.64□□□□□ -0.87
PNKP-225ENST00000636214 PPDPFLQ8WWR9 84 aa9.64□□□□□ -0.87
PNKP-225ENST00000636214 TRBV7-7A0A0K0K1E9 115 aa9.63□□□□□ -0.87
PNKP-225ENST00000636214 COX8AP10176 69 aa9.63□□□□□ -0.87
PNKP-225ENST00000636214 IGFL1Q6UW32 110 aa9.63□□□□□ -0.87
PNKP-225ENST00000636214 KRTAP9-6A0A140TA67 174 aa9.62□□□□□ -0.87
PNKP-225ENST00000636214 RAB37Q96AX2 223 aa9.62□□□□□ -0.87
PNKP-225ENST00000636214 LCE2CQ5TA81 110 aa9.59□□□□□ -0.87
PNKP-225ENST00000636214 TMA7Q9Y2S6 64 aaKnown RBP9.59□□□□□ -0.87
PNKP-225ENST00000636214 DLEU1O43261 78 aa9.58□□□□□ -0.88
PNKP-225ENST00000636214 CFC1BP0CG36 223 aa9.58□□□□□ -0.88
PNKP-225ENST00000636214 COX6B2Q6YFQ2 88 aa9.58□□□□□ -0.88
PNKP-225ENST00000636214 H3BUT2 72 aa9.55□□□□□ -0.88
PNKP-225ENST00000636214 LST1O00453 97 aa9.55□□□□□ -0.88
PNKP-225ENST00000636214 C14orf144Q96I85 54 aa9.55□□□□□ -0.88
PNKP-225ENST00000636214 H0YGX0 51 aa9.54□□□□□ -0.88
PNKP-225ENST00000636214 CFC1P0CG37 223 aa9.54□□□□□ -0.88
PNKP-225ENST00000636214 MT1HP80294 61 aa9.54□□□□□ -0.88
PNKP-225ENST00000636214 KRTAP19-2Q3LHN2 52 aa9.54□□□□□ -0.88
PNKP-225ENST00000636214 LCE2DQ5TA82 110 aaPredicted RBP9.54□□□□□ -0.88
PNKP-225ENST00000636214 SS18L2Q9UHA2 77 aa9.54□□□□□ -0.88
PNKP-225ENST00000636214 PAM16Q9Y3D7 125 aa9.54□□□□□ -0.88
PNKP-225ENST00000636214 SPATA45Q537H7 98 aa9.53□□□□□ -0.88
PNKP-225ENST00000636214 HIGD1BQ9P298 99 aa9.53□□□□□ -0.88
PNKP-225ENST00000636214 A0A0B4J2C4 111 aa9.52□□□□□ -0.89
PNKP-225ENST00000636214 GHRHP01286 108 aa9.52□□□□□ -0.89
PNKP-225ENST00000636214 OBSCN-AS1Q96MR7 158 aa9.52□□□□□ -0.89
PNKP-225ENST00000636214 VAMP8Q9BV40 100 aa9.52□□□□□ -0.89
PNKP-225ENST00000636214 M0R2T5 61 aa9.51□□□□□ -0.89
PNKP-225ENST00000636214 ATP11AUNQ6ZP68 121 aa9.51□□□□□ -0.89
PNKP-225ENST00000636214 TMEM238LA0A1B0GVL6 79 aa9.49□□□□□ -0.89
PNKP-225ENST00000636214 A6NJY4 79 aa9.49□□□□□ -0.89
PNKP-225ENST00000636214 NDUFV3P56181 108 aaKnown RBP9.47□□□□□ -0.89
PNKP-225ENST00000636214 Q6Q795 121 aa9.46□□□□□ -0.9
PNKP-225ENST00000636214 Q75L30 129 aa9.46□□□□□ -0.9
PNKP-225ENST00000636214 TEN1Q86WV5 123 aa9.46□□□□□ -0.9
PNKP-225ENST00000636214 FABP2P12104 132 aa9.45□□□□□ -0.9
PNKP-225ENST00000636214 CEND1Q8N111 149 aa9.45□□□□□ -0.9
PNKP-225ENST00000636214 A0A1B0GX51 115 aa9.44□□□□□ -0.9
PNKP-225ENST00000636214 FAM218AQ96MZ4 157 aa9.44□□□□□ -0.9
PNKP-225ENST00000636214 Q96NJ1 140 aa9.44□□□□□ -0.9
PNKP-225ENST00000636214 PRO1854Q9UHT4 67 aa9.44□□□□□ -0.9
PNKP-225ENST00000636214 H3BMG7 143 aa9.43□□□□□ -0.9
PNKP-225ENST00000636214 C2orf91Q6ZV80 131 aa9.43□□□□□ -0.9
PNKP-225ENST00000636214 A0A087WSZ3 146 aa9.42□□□□□ -0.9
PNKP-225ENST00000636214 FSIP2Q5CZC0 6907 aa9.4□□□□□ -0.9
PNKP-225ENST00000636214 DNAL4O96015 105 aa9.4□□□□□ -0.9
PNKP-225ENST00000636214 KRTAP10-6P60371 365 aaPredicted RBP9.39□□□□□ -0.91
PNKP-225ENST00000636214 TRIAP1O43715 76 aa9.36□□□□□ -0.91
PNKP-225ENST00000636214 LORP23490 312 aaPredicted RBP9.36□□□□□ -0.91
PNKP-225ENST00000636214 FXYD2P54710 66 aa9.36□□□□□ -0.91
PNKP-225ENST00000636214 CRCT1Q9UGL9 99 aa9.36□□□□□ -0.91
PNKP-225ENST00000636214 H3BQ85 93 aa9.35□□□□□ -0.91
PNKP-225ENST00000636214 PSMB2P49721 201 aa9.35□□□□□ -0.91
PNKP-225ENST00000636214 SIGMAR1Q99720 223 aa9.35□□□□□ -0.91
PNKP-225ENST00000636214 FLGP20930 4061 aaPredicted RBP9.35□□□□□ -0.91
PNKP-225ENST00000636214 ORMDL1Q9P0S3 153 aa9.34□□□□□ -0.91
PNKP-225ENST00000636214 COX6CP09669 75 aa9.33□□□□□ -0.92
PNKP-225ENST00000636214 HSD52Q0P140 79 aa9.32□□□□□ -0.92
PNKP-225ENST00000636214 ANKRD29Q8N6D5 301 aa9.32□□□□□ -0.92
PNKP-225ENST00000636214 C20orf166-AS1Q96NR2 134 aa9.32□□□□□ -0.92
PNKP-225ENST00000636214 TRBV20-1A0A075B6N2 111 aa9.3□□□□□ -0.92
PNKP-225ENST00000636214 A0A1B0GV72 72 aa9.3□□□□□ -0.92
PNKP-225ENST00000636214 A8MUU9 505 aa9.3□□□□□ -0.92
PNKP-225ENST00000636214 A0A1W2PNM2 257 aa9.29□□□□□ -0.92
PNKP-225ENST00000636214 DSCR10P59022 87 aa9.29□□□□□ -0.92
PNKP-225ENST00000636214 TMEM256-PLSCR3K7ERE1 68 aa9.28□□□□□ -0.92
PNKP-225ENST00000636214 TRBV7-4A0A0J9YYF1 115 aa9.27□□□□□ -0.93
PNKP-225ENST00000636214 K7ERJ3 54 aa9.26□□□□□ -0.93
PNKP-225ENST00000636214 IGKV4-1P06312 121 aa9.26□□□□□ -0.93
PNKP-225ENST00000636214 LINC00313P59037 77 aa9.26□□□□□ -0.93
PNKP-225ENST00000636214 LOC105371267A0A1B0GV96 52 aa9.24□□□□□ -0.93
PNKP-225ENST00000636214 TRACP01848 142 aa9.24□□□□□ -0.93
PNKP-225ENST00000636214 PYY3Q5JQD4 70 aa9.24□□□□□ -0.93
PNKP-225ENST00000636214 CCKP06307 115 aa9.23□□□□□ -0.93
PNKP-225ENST00000636214 UQCR10Q9UDW1 63 aa9.21□□□□□ -0.94
PNKP-225ENST00000636214 SCGB1C2P0DMR2 95 aa9.2□□□□□ -0.94
PNKP-225ENST00000636214 UBE2V1Q13404 147 aa9.19□□□□□ -0.94
PNKP-225ENST00000636214 VPS25Q9BRG1 176 aa9.19□□□□□ -0.94
PNKP-225ENST00000636214 FAM236DA0A1B0GTK5 79 aa9.17□□□□□ -0.94
PNKP-225ENST00000636214 SMIM6P0DI80 62 aa9.17□□□□□ -0.94
PNKP-225ENST00000636214 FAM236CP0DP71 79 aa9.17□□□□□ -0.94
PNKP-225ENST00000636214 IGHV6-1A0A0B4J1U7 121 aa9.16□□□□□ -0.94
PNKP-225ENST00000636214 DEFB116Q30KQ4 102 aa9.16□□□□□ -0.94
PNKP-225ENST00000636214 RBM3P98179 157 aaKnown RBP9.14□□□□□ -0.95
PNKP-225ENST00000636214 DSCR8Q96T75 97 aa9.14□□□□□ -0.95
PNKP-225ENST00000636214 LINC00472Q9H8W2 130 aa9.14□□□□□ -0.95
PNKP-225ENST00000636214 RBM12B-AS1Q9P1G2 102 aa9.12□□□□□ -0.95
PNKP-225ENST00000636214 KRTAP16-1A8MUX0 517 aa9.11□□□□□ -0.95
PNKP-225ENST00000636214 C21orf62-AS1Q17RA5 79 aa9.1□□□□□ -0.95
PNKP-225ENST00000636214 C8orf87E5RJ46 101 aa9.09□□□□□ -0.95
PNKP-225ENST00000636214 NOTCH2NLQ7Z3S9 236 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms