RNA–Protein interactions for RNA: ENST00000635994.1

GABRB3-218, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,192 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-218ENST00000635994 CSAG1Q6PB30 78 aa4.11□□□□□ -1.75
GABRB3-218ENST00000635994 WDR87Q6ZQQ6 2873 aa4.09□□□□□ -1.76
GABRB3-218ENST00000635994 Q8N377 158 aa4.08□□□□□ -1.76
GABRB3-218ENST00000635994 Q1T7F1 81 aa4.08□□□□□ -1.76
GABRB3-218ENST00000635994 KLKP1Q107X0 134 aa4.07□□□□□ -1.76
GABRB3-218ENST00000635994 FRYQ5TBA9 3013 aa4.07□□□□□ -1.76
GABRB3-218ENST00000635994 A0A0D9SG42 100 aa4.07□□□□□ -1.76
GABRB3-218ENST00000635994 SMG1Q96Q15 3661 aaKnown RBP4.07□□□□□ -1.76
GABRB3-218ENST00000635994 KRTAP10-3P60369 221 aa4.07□□□□□ -1.76
GABRB3-218ENST00000635994 LITAFQ99732 161 aa4.06□□□□□ -1.76
GABRB3-218ENST00000635994 SMCPP49901 116 aaPredicted RBP4.06□□□□□ -1.76
GABRB3-218ENST00000635994 PRO0461Q9UI25 63 aa4.06□□□□□ -1.76
GABRB3-218ENST00000635994 KRTAP21-3Q3LHN1 58 aa4.06□□□□□ -1.76
GABRB3-218ENST00000635994 RELNP78509 3460 aa4.05□□□□□ -1.76
GABRB3-218ENST00000635994 LCA10Q71F78 164 aa4.05□□□□□ -1.76
GABRB3-218ENST00000635994 CASC10Q5T4H9 136 aa4.05□□□□□ -1.76
GABRB3-218ENST00000635994 A0A1W2PNN7 141 aa4.04□□□□□ -1.76
GABRB3-218ENST00000635994 Q8N1X5 172 aa4.04□□□□□ -1.76
GABRB3-218ENST00000635994 NBPF19A0A087WUL8 3843 aa4.04□□□□□ -1.76
GABRB3-218ENST00000635994 OXTP01178 125 aa4.04□□□□□ -1.76
GABRB3-218ENST00000635994 PRR26Q8N8Z3 221 aa4.04□□□□□ -1.76
GABRB3-218ENST00000635994 BAHCC1Q9P281 2608 aa4.03□□□□□ -1.76
GABRB3-218ENST00000635994 A0A1B0GU33 70 aa4.03□□□□□ -1.76
GABRB3-218ENST00000635994 TNP2Q05952 138 aa4.03□□□□□ -1.76
GABRB3-218ENST00000635994 DMAC1Q96GE9 116 aa4.03□□□□□ -1.76
GABRB3-218ENST00000635994 FREM2Q5SZK8 3169 aa4.03□□□□□ -1.76
GABRB3-218ENST00000635994 C4orf26Q17RF5 130 aa4.03□□□□□ -1.76
GABRB3-218ENST00000635994 KTN1-AS1Q86SY8 53 aa4.02□□□□□ -1.77
GABRB3-218ENST00000635994 S4R3F8 94 aa4.02□□□□□ -1.77
GABRB3-218ENST00000635994 H7BZZ5 65 aa4.01□□□□□ -1.77
GABRB3-218ENST00000635994 ANAPC11Q9NYG5 84 aa4.01□□□□□ -1.77
GABRB3-218ENST00000635994 SETXQ7Z333 2677 aaKnown RBP4.01□□□□□ -1.77
GABRB3-218ENST00000635994 ZCCHC13Q8WW36 166 aaKnown RBP4.01□□□□□ -1.77
GABRB3-218ENST00000635994 A0A0A0MQY5 61 aa4.01□□□□□ -1.77
GABRB3-218ENST00000635994 PLAC4Q8WY50 150 aa4.01□□□□□ -1.77
GABRB3-218ENST00000635994 GIG44P09565 113 aaPredicted RBP4□□□□□ -1.77
GABRB3-218ENST00000635994 PLAC8Q9NZF1 115 aa4□□□□□ -1.77
GABRB3-218ENST00000635994 R4GN34 69 aa3.99□□□□□ -1.77
GABRB3-218ENST00000635994 A0A1W2PNM2 257 aa3.99□□□□□ -1.77
GABRB3-218ENST00000635994 FP248Q71RG6 208 aaPredicted RBP3.99□□□□□ -1.77
GABRB3-218ENST00000635994 CELSR3Q9NYQ7 3312 aa3.98□□□□□ -1.77
GABRB3-218ENST00000635994 NBEAQ8NFP9 2946 aa3.98□□□□□ -1.77
GABRB3-218ENST00000635994 WIPF1O43516 503 aa3.98□□□□□ -1.77
GABRB3-218ENST00000635994 ANKRD17O75179 2603 aaKnown RBP3.98□□□□□ -1.77
GABRB3-218ENST00000635994 VPS13CQ709C8 3753 aa3.98□□□□□ -1.77
GABRB3-218ENST00000635994 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.97□□□□□ -1.77
GABRB3-218ENST00000635994 ZZEF1O43149 2961 aa3.97□□□□□ -1.77
GABRB3-218ENST00000635994 LCE6AA0A183 80 aa3.97□□□□□ -1.77
GABRB3-218ENST00000635994 CSMD1Q96PZ7 3565 aa3.96□□□□□ -1.78
GABRB3-218ENST00000635994 DMBT1Q9UGM3 2413 aaPredicted RBP3.95□□□□□ -1.78
GABRB3-218ENST00000635994 Q5VSD8 79 aa3.95□□□□□ -1.78
GABRB3-218ENST00000635994 STAB2Q8WWQ8 2551 aa3.93□□□□□ -1.78
GABRB3-218ENST00000635994 A0A0G2JQZ4 141 aa3.91□□□□□ -1.78
GABRB3-218ENST00000635994 SPRR1BP22528 89 aa3.91□□□□□ -1.78
GABRB3-218ENST00000635994 SPINK7P58062 85 aa3.91□□□□□ -1.78
GABRB3-218ENST00000635994 ITPR3Q14573 2671 aa3.9□□□□□ -1.78
GABRB3-218ENST00000635994 COL6A5A8TX70 2615 aa3.9□□□□□ -1.78
GABRB3-218ENST00000635994 AKAP9Q99996 3911 aa3.9□□□□□ -1.79
GABRB3-218ENST00000635994 NOTCH1P46531 2555 aa3.9□□□□□ -1.79
GABRB3-218ENST00000635994 CSMD2Q7Z408 3487 aa3.89□□□□□ -1.79
GABRB3-218ENST00000635994 CR1P17927 2039 aa3.88□□□□□ -1.79
GABRB3-218ENST00000635994 Q75L30 129 aa3.88□□□□□ -1.79
GABRB3-218ENST00000635994 MGAQ8IWI9 3026 aa3.88□□□□□ -1.79
GABRB3-218ENST00000635994 OCR1Q9BZK8 76 aa3.88□□□□□ -1.79
GABRB3-218ENST00000635994 LINC01558Q9Y6Z2 57 aa3.88□□□□□ -1.79
GABRB3-218ENST00000635994 AKAP13Q12802 2813 aa3.88□□□□□ -1.79
GABRB3-218ENST00000635994 RPL37P61927 97 aaKnown RBP3.87□□□□□ -1.79
GABRB3-218ENST00000635994 ATMQ13315 3056 aa3.87□□□□□ -1.79
GABRB3-218ENST00000635994 DMXL2Q8TDJ6 3036 aa3.87□□□□□ -1.79
GABRB3-218ENST00000635994 ZNF292O60281 2723 aa3.87□□□□□ -1.79
GABRB3-218ENST00000635994 MMP24-AS1A0A0U1RRL7 71 aa3.87□□□□□ -1.79
GABRB3-218ENST00000635994 M0QZ58 72 aa3.87□□□□□ -1.79
GABRB3-218ENST00000635994 SPRR1AP35321 89 aa3.86□□□□□ -1.79
GABRB3-218ENST00000635994 EIF4EBP3O60516 100 aaPredicted RBP3.86□□□□□ -1.79
GABRB3-218ENST00000635994 ZNF469Q96JG9 3925 aaPredicted RBP3.86□□□□□ -1.79
GABRB3-218ENST00000635994 H1FX-AS1Q4G0G2 97 aa3.85□□□□□ -1.79
GABRB3-218ENST00000635994 Q5W150 140 aa3.85□□□□□ -1.79
GABRB3-218ENST00000635994 HELZ2Q9BYK8 2649 aaKnown RBP3.85□□□□□ -1.79
GABRB3-218ENST00000635994 NBEAL1Q6ZS30 2694 aa3.84□□□□□ -1.79
GABRB3-218ENST00000635994 TEP1Q99973 2627 aaKnown RBP3.83□□□□□ -1.8
GABRB3-218ENST00000635994 BOD1L1Q8NFC6 3051 aa3.83□□□□□ -1.8
GABRB3-218ENST00000635994 ROMO1P60602 79 aa3.82□□□□□ -1.8
GABRB3-218ENST00000635994 Q8N9P0 234 aaPredicted RBP3.82□□□□□ -1.8
GABRB3-218ENST00000635994 RPS29P62273 56 aaKnown RBP3.81□□□□□ -1.8
GABRB3-218ENST00000635994 UNC79Q9P2D8 2635 aa3.8□□□□□ -1.8
GABRB3-218ENST00000635994 LINC00472Q9H8W2 130 aa3.8□□□□□ -1.8
GABRB3-218ENST00000635994 CFAP46Q8IYW2 2715 aa3.8□□□□□ -1.8
GABRB3-218ENST00000635994 CUBNO60494 3623 aa3.8□□□□□ -1.8
GABRB3-218ENST00000635994 KALRNO60229 2985 aa3.79□□□□□ -1.8
GABRB3-218ENST00000635994 ITPR1Q14643 2758 aa3.79□□□□□ -1.8
GABRB3-218ENST00000635994 KRTAP10-1P60331 282 aa3.79□□□□□ -1.8
GABRB3-218ENST00000635994 KMT2BQ9UMN6 2715 aaPredicted RBP3.78□□□□□ -1.8
GABRB3-218ENST00000635994 CENPEQ02224 2701 aa3.78□□□□□ -1.8
GABRB3-218ENST00000635994 ASB16-AS1Q495Z4 193 aa3.77□□□□□ -1.81
GABRB3-218ENST00000635994 PRRC2CQ9Y520 2896 aaKnown RBP3.77□□□□□ -1.81
GABRB3-218ENST00000635994 IGSF10Q6WRI0 2623 aa3.76□□□□□ -1.81
GABRB3-218ENST00000635994 SVEP1Q4LDE5 3571 aa3.76□□□□□ -1.81
GABRB3-218ENST00000635994 ADM2Q7Z4H4 148 aa3.75□□□□□ -1.81
GABRB3-218ENST00000635994 PANO1I0J062 215 aa3.75□□□□□ -1.81
GABRB3-218ENST00000635994 Q6ZR54 194 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms