RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 C3orf79P0CE67 100 aa6.52□□□□□ -1.37
LINC00339-206ENST00000634451 HIST1H2BOP23527 126 aa6.52□□□□□ -1.37
LINC00339-206ENST00000634451 HIST1H2BBP33778 126 aa6.52□□□□□ -1.37
LINC00339-206ENST00000634451 HIST1H2BDP58876 126 aa6.52□□□□□ -1.37
LINC00339-206ENST00000634451 HIST1H2BCP62807 126 aa6.52□□□□□ -1.37
LINC00339-206ENST00000634451 HIST2H2BEQ16778 126 aa6.52□□□□□ -1.37
LINC00339-206ENST00000634451 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.52□□□□□ -1.37
LINC00339-206ENST00000634451 PET117Q6UWS5 81 aa6.52□□□□□ -1.37
LINC00339-206ENST00000634451 HIST1H2BHQ93079 126 aa6.52□□□□□ -1.37
LINC00339-206ENST00000634451 Q96NJ1 140 aa6.52□□□□□ -1.37
LINC00339-206ENST00000634451 HIST1H2BNQ99877 126 aa6.52□□□□□ -1.37
LINC00339-206ENST00000634451 HIST1H2BMQ99879 126 aa6.52□□□□□ -1.37
LINC00339-206ENST00000634451 Q6ZQY7 126 aa6.51□□□□□ -1.37
LINC00339-206ENST00000634451 ATOH7Q8N100 152 aa6.51□□□□□ -1.37
LINC00339-206ENST00000634451 F8WEM9 126 aa6.5□□□□□ -1.37
LINC00339-206ENST00000634451 CLEC2BQ92478 149 aa6.5□□□□□ -1.37
LINC00339-206ENST00000634451 SYNE2Q8WXH0 6885 aaKnown RBP6.49□□□□□ -1.37
LINC00339-206ENST00000634451 C20orf202A1L168 122 aa6.49□□□□□ -1.37
LINC00339-206ENST00000634451 H3BUT2 72 aa6.49□□□□□ -1.37
LINC00339-206ENST00000634451 LINC00575Q6W349 94 aa6.49□□□□□ -1.37
LINC00339-206ENST00000634451 A4D1N5 150 aa6.48□□□□□ -1.37
LINC00339-206ENST00000634451 KRTAP16-1A8MUX0 517 aa6.48□□□□□ -1.37
LINC00339-206ENST00000634451 IFITM1P13164 125 aa6.48□□□□□ -1.37
LINC00339-206ENST00000634451 KRTDAPP60985 99 aa6.48□□□□□ -1.37
LINC00339-206ENST00000634451 SLC7A5P1Q8MH63 180 aa6.48□□□□□ -1.37
LINC00339-206ENST00000634451 KRTAP9-3Q9BYQ3 159 aa6.48□□□□□ -1.37
LINC00339-206ENST00000634451 NHP2Q9NX24 153 aaKnown RBP6.48□□□□□ -1.37
LINC00339-206ENST00000634451 OCIAD2Q56VL3 154 aa6.47□□□□□ -1.37
LINC00339-206ENST00000634451 Q6JHZ5 121 aa6.46□□□□□ -1.38
LINC00339-206ENST00000634451 C20orf166-AS1Q96NR2 134 aa6.46□□□□□ -1.38
LINC00339-206ENST00000634451 MACF1Q9UPN3 7388 aaKnown RBP6.46□□□□□ -1.38
LINC00339-206ENST00000634451 TRAV13-2A0A0B4J235 113 aa6.45□□□□□ -1.38
LINC00339-206ENST00000634451 A8MUU9 505 aa6.45□□□□□ -1.38
LINC00339-206ENST00000634451 hADV29S1A0JD25 119 aa6.44□□□□□ -1.38
LINC00339-206ENST00000634451 LST1O00453 97 aa6.43□□□□□ -1.38
LINC00339-206ENST00000634451 DSCR10P59022 87 aa6.42□□□□□ -1.38
LINC00339-206ENST00000634451 Q6ZVH6 145 aa6.42□□□□□ -1.38
LINC00339-206ENST00000634451 KRTAP10-10P60014 251 aa6.41□□□□□ -1.38
LINC00339-206ENST00000634451 COPS9Q8WXC6 57 aa6.41□□□□□ -1.38
LINC00339-206ENST00000634451 TRBV20-1A0A075B6N2 111 aa6.4□□□□□ -1.38
LINC00339-206ENST00000634451 C12orf57Q99622 126 aa6.4□□□□□ -1.38
LINC00339-206ENST00000634451 VAMP3Q15836 100 aa6.39□□□□□ -1.39
LINC00339-206ENST00000634451 FAM236DA0A1B0GTK5 79 aa6.38□□□□□ -1.39
LINC00339-206ENST00000634451 FAM236CP0DP71 79 aa6.38□□□□□ -1.39
LINC00339-206ENST00000634451 HRES1P13985 223 aa6.37□□□□□ -1.39
LINC00339-206ENST00000634451 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.37□□□□□ -1.39
LINC00339-206ENST00000634451 MPLKIPQ8TAP9 179 aa6.36□□□□□ -1.39
LINC00339-206ENST00000634451 SNHG12Q9BXW3 62 aa6.36□□□□□ -1.39
LINC00339-206ENST00000634451 A0A087WSZ3 146 aa6.35□□□□□ -1.39
LINC00339-206ENST00000634451 COA6Q5JTJ3 125 aaKnown RBP6.35□□□□□ -1.39
LINC00339-206ENST00000634451 NOTCH2NLQ7Z3S9 236 aa6.35□□□□□ -1.39
LINC00339-206ENST00000634451 FAM218AQ96MZ4 157 aa6.32□□□□□ -1.4
LINC00339-206ENST00000634451 KRTAP19-6Q3LI70 58 aa6.31□□□□□ -1.4
LINC00339-206ENST00000634451 SIGMAR1Q99720 223 aa6.31□□□□□ -1.4
LINC00339-206ENST00000634451 SS18L2Q9UHA2 77 aa6.31□□□□□ -1.4
LINC00339-206ENST00000634451 PPDPFLQ8WWR9 84 aa6.3□□□□□ -1.4
LINC00339-206ENST00000634451 TEN1Q86WV5 123 aa6.29□□□□□ -1.4
LINC00339-206ENST00000634451 A0A1W2PNM2 257 aa6.28□□□□□ -1.4
LINC00339-206ENST00000634451 NDUFV3P56181 108 aaKnown RBP6.28□□□□□ -1.4
LINC00339-206ENST00000634451 SCGB1D1O95968 90 aa6.26□□□□□ -1.41
LINC00339-206ENST00000634451 DEFB116Q30KQ4 102 aa6.26□□□□□ -1.41
LINC00339-206ENST00000634451 BVES-AS1Q5T3Y7 98 aa6.26□□□□□ -1.41
LINC00339-206ENST00000634451 RBM12B-AS1Q9P1G2 102 aa6.26□□□□□ -1.41
LINC00339-206ENST00000634451 LINC00313P59037 77 aa6.25□□□□□ -1.41
LINC00339-206ENST00000634451 A0A1B0GV72 72 aa6.24□□□□□ -1.41
LINC00339-206ENST00000634451 H3BMG7 143 aa6.23□□□□□ -1.41
LINC00339-206ENST00000634451 IGKV4-1P06312 121 aa6.23□□□□□ -1.41
LINC00339-206ENST00000634451 SNRPEP62304 92 aaKnown RBP6.22□□□□□ -1.41
LINC00339-206ENST00000634451 HIST1H4GQ99525 98 aa6.22□□□□□ -1.41
LINC00339-206ENST00000634451 FABP2P12104 132 aa6.2□□□□□ -1.42
LINC00339-206ENST00000634451 HIST1H2BLQ99880 126 aa6.2□□□□□ -1.42
LINC00339-206ENST00000634451 KRTAP6-3Q3LI67 103 aa6.19□□□□□ -1.42
LINC00339-206ENST00000634451 HIST3H2BBQ8N257 126 aa6.19□□□□□ -1.42
LINC00339-206ENST00000634451 Q8N9P0 234 aaPredicted RBP6.19□□□□□ -1.42
LINC00339-206ENST00000634451 IGHV6-1A0A0B4J1U7 121 aa6.18□□□□□ -1.42
LINC00339-206ENST00000634451 HSBP1L1C9JCN9 74 aa6.17□□□□□ -1.42
LINC00339-206ENST00000634451 LINC00472Q9H8W2 130 aa6.17□□□□□ -1.42
LINC00339-206ENST00000634451 NEBP20929 6669 aa6.16□□□□□ -1.42
LINC00339-206ENST00000634451 RAB37Q96AX2 223 aa6.15□□□□□ -1.42
LINC00339-206ENST00000634451 H0YGX0 51 aa6.14□□□□□ -1.43
LINC00339-206ENST00000634451 COX8AP10176 69 aa6.14□□□□□ -1.43
LINC00339-206ENST00000634451 SPINK7P58062 85 aa6.13□□□□□ -1.43
LINC00339-206ENST00000634451 LINC00846Q9NV44 126 aa6.13□□□□□ -1.43
LINC00339-206ENST00000634451 A0A0B4J2C4 111 aa6.12□□□□□ -1.43
LINC00339-206ENST00000634451 ANKRD29Q8N6D5 301 aa6.12□□□□□ -1.43
LINC00339-206ENST00000634451 TRBV7-4A0A0J9YYF1 115 aa6.11□□□□□ -1.43
LINC00339-206ENST00000634451 ZCCHC13Q8WW36 166 aaKnown RBP6.11□□□□□ -1.43
LINC00339-206ENST00000634451 C14orf144Q96I85 54 aa6.11□□□□□ -1.43
LINC00339-206ENST00000634451 TRIAP1O43715 76 aa6.1□□□□□ -1.43
LINC00339-206ENST00000634451 S100A2P29034 98 aa6.1□□□□□ -1.43
LINC00339-206ENST00000634451 C2orf91Q6ZV80 131 aa6.1□□□□□ -1.43
LINC00339-206ENST00000634451 A0A1B0GVX0 72 aa6.08□□□□□ -1.44
LINC00339-206ENST00000634451 A8MWP4 228 aa6.08□□□□□ -1.44
LINC00339-206ENST00000634451 SNCGO76070 127 aa6.08□□□□□ -1.44
LINC00339-206ENST00000634451 CCKP06307 115 aa6.08□□□□□ -1.44
LINC00339-206ENST00000634451 WFDC13Q8IUB5 93 aa6.08□□□□□ -1.44
LINC00339-206ENST00000634451 DLEU1O43261 78 aa6.07□□□□□ -1.44
LINC00339-206ENST00000634451 MTURNQ8N3F0 131 aa6.07□□□□□ -1.44
LINC00339-206ENST00000634451 A0A1B0GX51 115 aa6.06□□□□□ -1.44
LINC00339-206ENST00000634451 TRACP01848 142 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms