RNA–Protein interactions for RNA: ENST00000629045.1

SCARNA4-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-201ENST00000629045 C1orf54Q8WWF1 131 aa-1.12□□□□□ -2.59
SCARNA4-201ENST00000629045 LEAP2Q969E1 77 aa-1.12□□□□□ -2.59
SCARNA4-201ENST00000629045 TSC22D3Q99576 134 aa-1.12□□□□□ -2.59
SCARNA4-201ENST00000629045 RGPD3A6NKT7 1758 aaPredicted RBP-1.12□□□□□ -2.59
SCARNA4-201ENST00000629045 RGPD4Q7Z3J3 1758 aa-1.12□□□□□ -2.59
SCARNA4-201ENST00000629045 TMEM131LA2VDJ0 1609 aa-1.12□□□□□ -2.59
SCARNA4-201ENST00000629045 LY75O60449 1722 aa-1.12□□□□□ -2.59
SCARNA4-201ENST00000629045 FAM135AQ9P2D6 1515 aa-1.13□□□□□ -2.59
SCARNA4-201ENST00000629045 LYNX1G3V0Z9 82 aa-1.13□□□□□ -2.59
SCARNA4-201ENST00000629045 GAFA1Q96PS6 74 aa-1.13□□□□□ -2.59
SCARNA4-201ENST00000629045 PARP4Q9UKK3 1724 aaKnown RBP-1.13□□□□□ -2.59
SCARNA4-201ENST00000629045 MAST1Q9Y2H9 1570 aa-1.13□□□□□ -2.59
SCARNA4-201ENST00000629045 SCAPERQ9BY12 1400 aa-1.14□□□□□ -2.59
SCARNA4-201ENST00000629045 NAP1L6A6NFF2 107 aa-1.14□□□□□ -2.59
SCARNA4-201ENST00000629045 TMEM262E9PQX1 116 aa-1.14□□□□□ -2.59
SCARNA4-201ENST00000629045 IGLC2P0DOY2 106 aa-1.14□□□□□ -2.59
SCARNA4-201ENST00000629045 IGLC3P0DOY3 106 aa-1.14□□□□□ -2.59
SCARNA4-201ENST00000629045 SMARCA2P51531 1590 aa-1.14□□□□□ -2.59
SCARNA4-201ENST00000629045 SCN7AQ01118 1682 aa-1.14□□□□□ -2.59
SCARNA4-201ENST00000629045 TARBP1Q13395 1621 aaKnown RBP-1.15□□□□□ -2.59
SCARNA4-201ENST00000629045 MON2Q7Z3U7 1717 aa-1.15□□□□□ -2.59
SCARNA4-201ENST00000629045 ERVK-7P63135 1459 aa-1.15□□□□□ -2.59
SCARNA4-201ENST00000629045 MRC2Q9UBG0 1479 aa-1.15□□□□□ -2.59
SCARNA4-201ENST00000629045 ANKRD36BQ8N2N9 1353 aa-1.15□□□□□ -2.59
SCARNA4-201ENST00000629045 CRYM-AS1A6NIL9 109 aa-1.15□□□□□ -2.59
SCARNA4-201ENST00000629045 SNAPC5O75971 98 aa-1.15□□□□□ -2.59
SCARNA4-201ENST00000629045 ACBD7Q8N6N7 88 aa-1.15□□□□□ -2.59
SCARNA4-201ENST00000629045 TTTY10Q9BZA0 68 aa-1.15□□□□□ -2.59
SCARNA4-201ENST00000629045 C5P01031 1676 aa-1.16□□□□□ -2.59
SCARNA4-201ENST00000629045 ROBO1Q9Y6N7 1651 aa-1.16□□□□□ -2.59
SCARNA4-201ENST00000629045 CRYBG3Q68DQ2 2970 aa-1.16□□□□□ -2.59
SCARNA4-201ENST00000629045 SAMD9Q5K651 1589 aa-1.16□□□□□ -2.59
SCARNA4-201ENST00000629045 MLH3Q9UHC1 1453 aa-1.16□□□□□ -2.59
SCARNA4-201ENST00000629045 LCE6AA0A183 80 aa-1.16□□□□□ -2.6
SCARNA4-201ENST00000629045 IQCF6A8MYZ5 107 aa-1.16□□□□□ -2.6
SCARNA4-201ENST00000629045 D6R8Y8 96 aa-1.16□□□□□ -2.6
SCARNA4-201ENST00000629045 PMCHL1Q16048 86 aa-1.16□□□□□ -2.6
SCARNA4-201ENST00000629045 MUSTN1Q8IVN3 82 aa-1.16□□□□□ -2.6
SCARNA4-201ENST00000629045 QSER1Q2KHR3 1735 aa-1.16□□□□□ -2.6
SCARNA4-201ENST00000629045 TOP2BQ02880 1626 aa-1.16□□□□□ -2.6
SCARNA4-201ENST00000629045 CEP250Q9BV73 2442 aa-1.16□□□□□ -2.6
SCARNA4-201ENST00000629045 WDFY3Q8IZQ1 3526 aa-1.16□□□□□ -2.6
SCARNA4-201ENST00000629045 DNMBPQ6XZF7 1577 aa-1.17□□□□□ -2.6
SCARNA4-201ENST00000629045 ATP10BO94823 1461 aa-1.17□□□□□ -2.6
SCARNA4-201ENST00000629045 PHLPP1O60346 1717 aa-1.17□□□□□ -2.6
SCARNA4-201ENST00000629045 POLR1AO95602 1720 aaPredicted RBP-1.17□□□□□ -2.6
SCARNA4-201ENST00000629045 SUPT6HQ7KZ85 1726 aaKnown RBP-1.17□□□□□ -2.6
SCARNA4-201ENST00000629045 PLIN4Q96Q06 1357 aa-1.17□□□□□ -2.6
SCARNA4-201ENST00000629045 CFAP54Q96N23 3096 aa-1.17□□□□□ -2.6
SCARNA4-201ENST00000629045 NDUFC1O43677 76 aa-1.17□□□□□ -2.6
SCARNA4-201ENST00000629045 MRPS10P82664 201 aaKnown RBP-1.17□□□□□ -2.6
SCARNA4-201ENST00000629045 CGREF1Q99674 301 aa-1.17□□□□□ -2.6
SCARNA4-201ENST00000629045 FAM107BQ9H098 131 aa-1.17□□□□□ -2.6
SCARNA4-201ENST00000629045 A0A1B0GUL6 1792 aa-1.17□□□□□ -2.6
SCARNA4-201ENST00000629045 WIZO95785 1651 aa-1.17□□□□□ -2.6
SCARNA4-201ENST00000629045 PKD1L3Q7Z443 1732 aa-1.18□□□□□ -2.6
SCARNA4-201ENST00000629045 DCHS1Q96JQ0 3298 aa-1.18□□□□□ -2.6
SCARNA4-201ENST00000629045 CCNB3Q8WWL7 1395 aa-1.18□□□□□ -2.6
SCARNA4-201ENST00000629045 LRRC7Q96NW7 1537 aa-1.18□□□□□ -2.6
SCARNA4-201ENST00000629045 SHPRHQ149N8 1683 aa-1.18□□□□□ -2.6
SCARNA4-201ENST00000629045 PLCH1Q4KWH8 1693 aa-1.18□□□□□ -2.6
SCARNA4-201ENST00000629045 CYB5AP00167 134 aa-1.18□□□□□ -2.6
SCARNA4-201ENST00000629045 S100A8P05109 93 aa-1.18□□□□□ -2.6
SCARNA4-201ENST00000629045 FCER1GP30273 86 aa-1.18□□□□□ -2.6
SCARNA4-201ENST00000629045 MINOS1Q5TGZ0 78 aa-1.18□□□□□ -2.6
SCARNA4-201ENST00000629045 ALKAL2Q6UX46 152 aa-1.18□□□□□ -2.6
SCARNA4-201ENST00000629045 SVBPQ8N300 66 aa-1.18□□□□□ -2.6
SCARNA4-201ENST00000629045 NESP48681 1621 aa-1.18□□□□□ -2.6
SCARNA4-201ENST00000629045 ROCK2O75116 1388 aaKnown RBP-1.19□□□□□ -2.6
SCARNA4-201ENST00000629045 KIAA0586Q9BVV6 1533 aa-1.19□□□□□ -2.6
SCARNA4-201ENST00000629045 A0A1B0GUT8 65 aa-1.19□□□□□ -2.6
SCARNA4-201ENST00000629045 MRPL33O75394 65 aaKnown RBP-1.19□□□□□ -2.6
SCARNA4-201ENST00000629045 UQCRHP07919 91 aa-1.19□□□□□ -2.6
SCARNA4-201ENST00000629045 SFTA3P0C7M3 94 aa-1.19□□□□□ -2.6
SCARNA4-201ENST00000629045 KRTDAPP60985 99 aa-1.19□□□□□ -2.6
SCARNA4-201ENST00000629045 IER3IP1Q9Y5U9 82 aa-1.19□□□□□ -2.6
SCARNA4-201ENST00000629045 FOCADQ5VW36 1801 aa-1.19□□□□□ -2.6
SCARNA4-201ENST00000629045 EIF4G3O43432 1585 aaKnown RBP-1.2□□□□□ -2.6
SCARNA4-201ENST00000629045 NWD1Q149M9 1564 aa-1.2□□□□□ -2.6
SCARNA4-201ENST00000629045 VPS13CQ709C8 3753 aa-1.2□□□□□ -2.6
SCARNA4-201ENST00000629045 S100A12P80511 92 aa-1.2□□□□□ -2.6
SCARNA4-201ENST00000629045 ZNF720Q7Z2F6 126 aa-1.2□□□□□ -2.6
SCARNA4-201ENST00000629045 DPY30Q9C005 99 aa-1.2□□□□□ -2.6
SCARNA4-201ENST00000629045 KIF1AQ12756 1690 aa-1.2□□□□□ -2.6
SCARNA4-201ENST00000629045 ABCC2Q92887 1545 aa-1.2□□□□□ -2.6
SCARNA4-201ENST00000629045 TRBV25-1A0A075B6N4 114 aa-1.21□□□□□ -2.6
SCARNA4-201ENST00000629045 TRAV21A0A0B4J279 112 aa-1.21□□□□□ -2.6
SCARNA4-201ENST00000629045 IFI27P40305 119 aaPredicted RBP-1.21□□□□□ -2.6
SCARNA4-201ENST00000629045 RPS27P42677 84 aaKnown RBP-1.21□□□□□ -2.6
SCARNA4-201ENST00000629045 SARNPP82979 210 aaKnown RBP-1.21□□□□□ -2.6
SCARNA4-201ENST00000629045 HMGN3Q15651 99 aa-1.21□□□□□ -2.6
SCARNA4-201ENST00000629045 ETDBQ3ZM63 59 aa-1.21□□□□□ -2.6
SCARNA4-201ENST00000629045 RPS27LQ71UM5 84 aaKnown RBP-1.21□□□□□ -2.6
SCARNA4-201ENST00000629045 C20orf78Q9BR46 151 aa-1.21□□□□□ -2.6
SCARNA4-201ENST00000629045 ABRACLQ9P1F3 81 aa-1.21□□□□□ -2.6
SCARNA4-201ENST00000629045 C6orf48Q9UBA6 75 aa-1.21□□□□□ -2.6
SCARNA4-201ENST00000629045 CACFD1Q9UGQ2 172 aa-1.21□□□□□ -2.6
SCARNA4-201ENST00000629045 TOPAZ1Q8N9V7 1692 aa-1.21□□□□□ -2.6
SCARNA4-201ENST00000629045 ASXL1Q8IXJ9 1541 aa-1.21□□□□□ -2.6
SCARNA4-201ENST00000629045 EP400Q96L91 3159 aa-1.21□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms