RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 COX17Q14061 63 aa2.51□□□□□ -2.01
R3HDM1-220ENST00000628915 ZFYVE26Q68DK2 2539 aa2.51□□□□□ -2.01
R3HDM1-220ENST00000628915 MYCBP2O75592 4640 aa2.51□□□□□ -2.01
R3HDM1-220ENST00000628915 KRTAP1-3Q8IUG1 177 aa2.51□□□□□ -2.01
R3HDM1-220ENST00000628915 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.51□□□□□ -2.01
R3HDM1-220ENST00000628915 ST20-AS1Q8NBB2 130 aa2.51□□□□□ -2.01
R3HDM1-220ENST00000628915 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.51□□□□□ -2.01
R3HDM1-220ENST00000628915 CACNA1HO95180 2353 aa2.51□□□□□ -2.01
R3HDM1-220ENST00000628915 CHD8Q9HCK8 2581 aa2.51□□□□□ -2.01
R3HDM1-220ENST00000628915 SONP18583 2426 aaKnown RBP2.51□□□□□ -2.01
R3HDM1-220ENST00000628915 A0A1B0GVX0 72 aa2.51□□□□□ -2.01
R3HDM1-220ENST00000628915 LCE6AA0A183 80 aa2.5□□□□□ -2.01
R3HDM1-220ENST00000628915 A8MUU9 505 aa2.5□□□□□ -2.01
R3HDM1-220ENST00000628915 Q6YL49 198 aa2.5□□□□□ -2.01
R3HDM1-220ENST00000628915 Q6ZSN1 163 aa2.5□□□□□ -2.01
R3HDM1-220ENST00000628915 C5orf56Q8N8D9 126 aa2.5□□□□□ -2.01
R3HDM1-220ENST00000628915 A0A096LNT2 108 aa2.49□□□□□ -2.01
R3HDM1-220ENST00000628915 LYNX1G3V0Z9 82 aa2.49□□□□□ -2.01
R3HDM1-220ENST00000628915 LYNX1P0DP58 116 aa2.49□□□□□ -2.01
R3HDM1-220ENST00000628915 Q8IZM0 81 aa2.49□□□□□ -2.01
R3HDM1-220ENST00000628915 DNAH10Q8IVF4 4471 aa2.49□□□□□ -2.01
R3HDM1-220ENST00000628915 A0A1W2PNU3 283 aaPredicted RBP2.49□□□□□ -2.01
R3HDM1-220ENST00000628915 KRTAP19-1Q8IUB9 90 aa2.49□□□□□ -2.01
R3HDM1-220ENST00000628915 PCLOQ9Y6V0 5065 aa2.49□□□□□ -2.01
R3HDM1-220ENST00000628915 NIPBLQ6KC79 2804 aaeCLIP2.49□□□□□ -2.01
R3HDM1-220ENST00000628915 M0R2N4 97 aa2.49□□□□□ -2.01
R3HDM1-220ENST00000628915 ZCCHC13Q8WW36 166 aaKnown RBP2.49□□□□□ -2.01
R3HDM1-220ENST00000628915 KLK12Q9UKR0 248 aa2.49□□□□□ -2.01
R3HDM1-220ENST00000628915 KCNQ1DNQ9H478 68 aa2.48□□□□□ -2.01
R3HDM1-220ENST00000628915 CSPG4Q6UVK1 2322 aa2.48□□□□□ -2.01
R3HDM1-220ENST00000628915 DEFB116Q30KQ4 102 aa2.48□□□□□ -2.01
R3HDM1-220ENST00000628915 DMBT1Q9UGM3 2413 aaPredicted RBP2.48□□□□□ -2.01
R3HDM1-220ENST00000628915 RPL37AP61513 92 aaKnown RBP2.47□□□□□ -2.01
R3HDM1-220ENST00000628915 CNBPP62633 177 aaKnown RBP2.47□□□□□ -2.01
R3HDM1-220ENST00000628915 DEFB109BQ30KR1 87 aa2.47□□□□□ -2.01
R3HDM1-220ENST00000628915 P0C880 135 aa2.47□□□□□ -2.01
R3HDM1-220ENST00000628915 SPATA8Q6RVD6 105 aa2.47□□□□□ -2.01
R3HDM1-220ENST00000628915 GCN1Q92616 2671 aaKnown RBP2.46□□□□□ -2.02
R3HDM1-220ENST00000628915 A0A087WSZ3 146 aa2.46□□□□□ -2.02
R3HDM1-220ENST00000628915 A8MTW9 85 aa2.46□□□□□ -2.02
R3HDM1-220ENST00000628915 DEFB105AQ8NG35 78 aa2.46□□□□□ -2.02
R3HDM1-220ENST00000628915 C4orf3Q8WVX3 66 aa2.46□□□□□ -2.02
R3HDM1-220ENST00000628915 DNAH17Q9UFH2 4485 aa2.46□□□□□ -2.02
R3HDM1-220ENST00000628915 LINC00959A0A1B0GUT2 108 aa2.46□□□□□ -2.02
R3HDM1-220ENST00000628915 KRTAP23-1A1A580 65 aa2.46□□□□□ -2.02
R3HDM1-220ENST00000628915 MAP1AP78559 2803 aaPredicted RBP2.45□□□□□ -2.02
R3HDM1-220ENST00000628915 IGLV6-57P01721 117 aa2.45□□□□□ -2.02
R3HDM1-220ENST00000628915 DEFB131AP59861 70 aa2.45□□□□□ -2.02
R3HDM1-220ENST00000628915 KRTAP4-16G5E9R7 235 aaPredicted RBP2.45□□□□□ -2.02
R3HDM1-220ENST00000628915 PLECQ15149 4684 aaKnown RBP2.45□□□□□ -2.02
R3HDM1-220ENST00000628915 BAHCC1Q9P281 2608 aa2.44□□□□□ -2.02
R3HDM1-220ENST00000628915 MXRA5Q9NR99 2828 aa2.44□□□□□ -2.02
R3HDM1-220ENST00000628915 LY6EQ16553 131 aa2.44□□□□□ -2.02
R3HDM1-220ENST00000628915 HSPG2P98160 4391 aa2.44□□□□□ -2.02
R3HDM1-220ENST00000628915 MEGF8Q7Z7M0 2845 aa2.44□□□□□ -2.02
R3HDM1-220ENST00000628915 C9orf163Q8N9P6 203 aa2.44□□□□□ -2.02
R3HDM1-220ENST00000628915 ABCA12Q86UK0 2595 aa2.44□□□□□ -2.02
R3HDM1-220ENST00000628915 PIEZO2Q9H5I5 2752 aa2.44□□□□□ -2.02
R3HDM1-220ENST00000628915 CRIPTQ9P021 101 aa2.43□□□□□ -2.02
R3HDM1-220ENST00000628915 IGSF10Q6WRI0 2623 aa2.43□□□□□ -2.02
R3HDM1-220ENST00000628915 A0A1B0GUV1 79 aa2.43□□□□□ -2.02
R3HDM1-220ENST00000628915 C6orf48Q9UBA6 75 aa2.43□□□□□ -2.02
R3HDM1-220ENST00000628915 ZNF861PO60384 105 aa2.43□□□□□ -2.02
R3HDM1-220ENST00000628915 LINC00612Q8N6U2 182 aa2.43□□□□□ -2.02
R3HDM1-220ENST00000628915 Q5W150 140 aa2.42□□□□□ -2.02
R3HDM1-220ENST00000628915 DNAH8Q96JB1 4490 aa2.42□□□□□ -2.02
R3HDM1-220ENST00000628915 K7EQZ3 153 aa2.42□□□□□ -2.02
R3HDM1-220ENST00000628915 DNAH5Q8TE73 4624 aa2.42□□□□□ -2.02
R3HDM1-220ENST00000628915 HIVEP2P31629 2446 aa2.42□□□□□ -2.02
R3HDM1-220ENST00000628915 SPG11Q96JI7 2443 aa2.42□□□□□ -2.02
R3HDM1-220ENST00000628915 PKD1L1Q8TDX9 2849 aa2.42□□□□□ -2.02
R3HDM1-220ENST00000628915 CCL19Q99731 98 aa2.42□□□□□ -2.02
R3HDM1-220ENST00000628915 KRTAP9-9Q9BYP9 154 aa2.42□□□□□ -2.02
R3HDM1-220ENST00000628915 KRTAP9-4Q9BYQ2 154 aa2.42□□□□□ -2.02
R3HDM1-220ENST00000628915 TNXBP22105 4242 aa2.41□□□□□ -2.02
R3HDM1-220ENST00000628915 SPRR4Q96PI1 79 aa2.41□□□□□ -2.02
R3HDM1-220ENST00000628915 NCOR2Q9Y618 2525 aa2.41□□□□□ -2.02
R3HDM1-220ENST00000628915 J3QKU1 62 aa2.41□□□□□ -2.02
R3HDM1-220ENST00000628915 IGLV5-48A0A075B6I7 105 aa2.41□□□□□ -2.02
R3HDM1-220ENST00000628915 DEFB131BA0A096LNP1 70 aa2.41□□□□□ -2.02
R3HDM1-220ENST00000628915 H3BUX3 64 aa2.41□□□□□ -2.02
R3HDM1-220ENST00000628915 ABCA13Q86UQ4 5058 aa2.41□□□□□ -2.02
R3HDM1-220ENST00000628915 LINC00304Q8N9R0 145 aa2.4□□□□□ -2.02
R3HDM1-220ENST00000628915 NOP10Q9NPE3 64 aaKnown RBP2.4□□□□□ -2.02
R3HDM1-220ENST00000628915 KRTAP4-8A0A0G2JLE6 195 aa2.4□□□□□ -2.03
R3HDM1-220ENST00000628915 GVQW2A0A096LPI5 108 aaPredicted RBP2.4□□□□□ -2.03
R3HDM1-220ENST00000628915 HRES1P13985 223 aa2.4□□□□□ -2.03
R3HDM1-220ENST00000628915 TYMSOSQ8TAI1 123 aa2.4□□□□□ -2.03
R3HDM1-220ENST00000628915 PRR34Q9NV39 138 aa2.4□□□□□ -2.03
R3HDM1-220ENST00000628915 UNC79Q9P2D8 2635 aa2.39□□□□□ -2.03
R3HDM1-220ENST00000628915 IGKV2D-24A0A075B6R9 120 aa2.39□□□□□ -2.03
R3HDM1-220ENST00000628915 TP53AIP1Q9HCN2 124 aa2.39□□□□□ -2.03
R3HDM1-220ENST00000628915 TEX15Q9BXT5 2789 aa2.39□□□□□ -2.03
R3HDM1-220ENST00000628915 FLNCQ14315 2725 aa2.39□□□□□ -2.03
R3HDM1-220ENST00000628915 FN1P02751 2386 aaKnown RBP2.39□□□□□ -2.03
R3HDM1-220ENST00000628915 IGF2RP11717 2491 aa2.39□□□□□ -2.03
R3HDM1-220ENST00000628915 HTN3P15516 51 aa2.39□□□□□ -2.03
R3HDM1-220ENST00000628915 DSCR10P59022 87 aa2.39□□□□□ -2.03
R3HDM1-220ENST00000628915 PLAC8Q9NZF1 115 aa2.39□□□□□ -2.03
R3HDM1-220ENST00000628915 ANGP03950 147 aaKnown RBP2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms