RNA–Protein interactions for RNA: ENST00000628906.2

LINC00649-220, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 625 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-220ENST00000628906 ADCYAP1P18509 176 aa2.32□□□□□ -2.04
LINC00649-220ENST00000628906 SNRPEP62304 92 aaKnown RBP2.32□□□□□ -2.04
LINC00649-220ENST00000628906 KRTAP5-11Q6L8G4 156 aa2.32□□□□□ -2.04
LINC00649-220ENST00000628906 OSTCQ9NRP0 149 aa2.32□□□□□ -2.04
LINC00649-220ENST00000628906 NAT8BQ9UHF3 227 aa2.32□□□□□ -2.04
LINC00649-220ENST00000628906 COLCA2A8K830 154 aa2.31□□□□□ -2.04
LINC00649-220ENST00000628906 F8W036 122 aa2.31□□□□□ -2.04
LINC00649-220ENST00000628906 NDUFC2O95298 119 aa2.31□□□□□ -2.04
LINC00649-220ENST00000628906 IGLC3P0DOY3 106 aa2.31□□□□□ -2.04
LINC00649-220ENST00000628906 FAM74A3Q4VXF1 159 aa2.31□□□□□ -2.04
LINC00649-220ENST00000628906 LCE1FQ5T754 118 aa2.31□□□□□ -2.04
LINC00649-220ENST00000628906 SOSTDC1Q6X4U4 206 aa2.31□□□□□ -2.04
LINC00649-220ENST00000628906 SCGB3A1Q96QR1 104 aa2.31□□□□□ -2.04
LINC00649-220ENST00000628906 MAP1LC3AQ9H492 121 aa2.31□□□□□ -2.04
LINC00649-220ENST00000628906 LAMTOR2Q9Y2Q5 125 aa2.31□□□□□ -2.04
LINC00649-220ENST00000628906 CBY1Q9Y3M2 126 aa2.31□□□□□ -2.04
LINC00649-220ENST00000628906 V9GYV3 84 aa2.31□□□□□ -2.04
LINC00649-220ENST00000628906 ZNF815PA8K554 130 aa2.3□□□□□ -2.04
LINC00649-220ENST00000628906 LINC00587B1AMM8 73 aa2.3□□□□□ -2.04
LINC00649-220ENST00000628906 ELOF1P60002 83 aaKnown RBP2.3□□□□□ -2.04
LINC00649-220ENST00000628906 PRAC1Q96KF2 57 aa2.3□□□□□ -2.04
LINC00649-220ENST00000628906 MEIG1Q5JSS6 88 aa2.29□□□□□ -2.04
LINC00649-220ENST00000628906 Q6JHZ5 121 aa2.29□□□□□ -2.04
LINC00649-220ENST00000628906 CLEC2BQ92478 149 aa2.29□□□□□ -2.04
LINC00649-220ENST00000628906 NXT2Q9NPJ8 142 aaKnown RBP2.29□□□□□ -2.04
LINC00649-220ENST00000628906 CRIPTQ9P021 101 aa2.29□□□□□ -2.04
LINC00649-220ENST00000628906 A0A1B0GXF2 115 aa2.28□□□□□ -2.04
LINC00649-220ENST00000628906 S100A8P05109 93 aa2.28□□□□□ -2.04
LINC00649-220ENST00000628906 LCE1EQ5T753 118 aa2.28□□□□□ -2.04
LINC00649-220ENST00000628906 PRR15Q8IV56 129 aa2.28□□□□□ -2.04
LINC00649-220ENST00000628906 SMIM27A0A1W2PRY6 76 aa2.27□□□□□ -2.05
LINC00649-220ENST00000628906 COX7BP24311 80 aa2.27□□□□□ -2.05
LINC00649-220ENST00000628906 HERV-K104P63124 156 aa2.27□□□□□ -2.05
LINC00649-220ENST00000628906 MAP1LC3CQ9BXW4 147 aa2.27□□□□□ -2.05
LINC00649-220ENST00000628906 LINC01549A6NIU2 74 aa2.26□□□□□ -2.05
LINC00649-220ENST00000628906 TMEM250H0YL14 139 aa2.26□□□□□ -2.05
LINC00649-220ENST00000628906 TEX46H3BTG2 121 aa2.26□□□□□ -2.05
LINC00649-220ENST00000628906 C5orf47Q569G3 176 aa2.26□□□□□ -2.05
LINC00649-220ENST00000628906 SS18L2Q9UHA2 77 aa2.26□□□□□ -2.05
LINC00649-220ENST00000628906 F8WEM9 126 aa2.25□□□□□ -2.05
LINC00649-220ENST00000628906 ADAMTSL4-AS1Q5T5F5 129 aa2.25□□□□□ -2.05
LINC00649-220ENST00000628906 SYNE1Q8NF91 8797 aaKnown RBP2.25□□□□□ -2.05
LINC00649-220ENST00000628906 A0A0J9YXY3 114 aa2.24□□□□□ -2.05
LINC00649-220ENST00000628906 MRPL54Q6P161 138 aaKnown RBP2.24□□□□□ -2.05
LINC00649-220ENST00000628906 LCA10Q71F78 164 aa2.24□□□□□ -2.05
LINC00649-220ENST00000628906 C11orf86A6NJI1 115 aa2.23□□□□□ -2.05
LINC00649-220ENST00000628906 MT1GP13640 62 aa2.23□□□□□ -2.05
LINC00649-220ENST00000628906 TMEM170BQ5T4T1 132 aa2.23□□□□□ -2.05
LINC00649-220ENST00000628906 COMMD7Q86VX2 200 aa2.23□□□□□ -2.05
LINC00649-220ENST00000628906 TRAV13-2A0A0B4J235 113 aa2.22□□□□□ -2.05
LINC00649-220ENST00000628906 TRBV7-6A0A0J9YX20 115 aa2.22□□□□□ -2.05
LINC00649-220ENST00000628906 KRTAP19-7Q3SYF9 63 aa2.22□□□□□ -2.05
LINC00649-220ENST00000628906 OCIAD2Q56VL3 154 aa2.22□□□□□ -2.05
LINC00649-220ENST00000628906 PLAC4Q8WY50 150 aa2.22□□□□□ -2.05
LINC00649-220ENST00000628906 MIEN1Q9BRT3 115 aa2.22□□□□□ -2.05
LINC00649-220ENST00000628906 MT1EP04732 61 aa2.21□□□□□ -2.06
LINC00649-220ENST00000628906 RHEBQ15382 184 aa2.21□□□□□ -2.06
LINC00649-220ENST00000628906 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.21□□□□□ -2.06
LINC00649-220ENST00000628906 CSAG1Q6PB30 78 aa2.21□□□□□ -2.06
LINC00649-220ENST00000628906 TMEM223A0PJW6 202 aa2.2□□□□□ -2.06
LINC00649-220ENST00000628906 ARPC5O15511 151 aa2.2□□□□□ -2.06
LINC00649-220ENST00000628906 C3orf79P0CE67 100 aa2.2□□□□□ -2.06
LINC00649-220ENST00000628906 KRTAP5-2Q701N4 177 aa2.2□□□□□ -2.06
LINC00649-220ENST00000628906 SMIM7Q9BQ49 75 aa2.2□□□□□ -2.06
LINC00649-220ENST00000628906 MYMXA0A1B0GTQ4 84 aa2.19□□□□□ -2.06
LINC00649-220ENST00000628906 NDUFAF8A1L188 74 aa2.19□□□□□ -2.06
LINC00649-220ENST00000628906 LINC01546A6NGU7 62 aa2.19□□□□□ -2.06
LINC00649-220ENST00000628906 H0YAA0 97 aa2.19□□□□□ -2.06
LINC00649-220ENST00000628906 OR13C6PQ8NH95 151 aa2.19□□□□□ -2.06
LINC00649-220ENST00000628906 SIGMAR1Q99720 223 aa2.19□□□□□ -2.06
LINC00649-220ENST00000628906 NHP2Q9NX24 153 aaKnown RBP2.19□□□□□ -2.06
LINC00649-220ENST00000628906 OBSCNQ5VST9 7968 aa2.18□□□□□ -2.06
LINC00649-220ENST00000628906 HBDP02042 147 aa2.18□□□□□ -2.06
LINC00649-220ENST00000628906 CEBPGP53567 150 aa2.18□□□□□ -2.06
LINC00649-220ENST00000628906 LCE3CQ5T5A8 94 aa2.18□□□□□ -2.06
LINC00649-220ENST00000628906 PP632Q6XCG6 107 aa2.18□□□□□ -2.06
LINC00649-220ENST00000628906 ATP5L2Q7Z4Y8 100 aa2.18□□□□□ -2.06
LINC00649-220ENST00000628906 BATF3Q9NR55 127 aa2.18□□□□□ -2.06
LINC00649-220ENST00000628906 A0A087WSZ3 146 aa2.17□□□□□ -2.06
LINC00649-220ENST00000628906 KRTAP12-4P60329 112 aa2.16□□□□□ -2.06
LINC00649-220ENST00000628906 IFITM3Q01628 133 aa2.16□□□□□ -2.06
LINC00649-220ENST00000628906 IFITM2Q01629 132 aa2.16□□□□□ -2.06
LINC00649-220ENST00000628906 MT1MQ8N339 61 aa2.16□□□□□ -2.06
LINC00649-220ENST00000628906 SPANXDQ9BXN6 97 aa2.16□□□□□ -2.06
LINC00649-220ENST00000628906 IGKV4-1P06312 121 aa2.15□□□□□ -2.07
LINC00649-220ENST00000628906 TEN1Q86WV5 123 aa2.15□□□□□ -2.07
LINC00649-220ENST00000628906 LINC00518Q8N0U6 118 aa2.15□□□□□ -2.07
LINC00649-220ENST00000628906 IGHV6-1A0A0B4J1U7 121 aa2.14□□□□□ -2.07
LINC00649-220ENST00000628906 A4D1N5 150 aa2.14□□□□□ -2.07
LINC00649-220ENST00000628906 NMUP48645 174 aa2.14□□□□□ -2.07
LINC00649-220ENST00000628906 BAGE3Q86Y29 109 aa2.14□□□□□ -2.07
LINC00649-220ENST00000628906 RPS10P5Q9NQ39 176 aa2.14□□□□□ -2.07
LINC00649-220ENST00000628906 SPANXCQ9NY87 97 aa2.14□□□□□ -2.07
LINC00649-220ENST00000628906 IGKV3D-7A0A0C4DH55 119 aa2.13□□□□□ -2.07
LINC00649-220ENST00000628906 NPC2P61916 151 aa2.13□□□□□ -2.07
LINC00649-220ENST00000628906 SLC7A5P1Q8MH63 180 aa2.13□□□□□ -2.07
LINC00649-220ENST00000628906 DSCR8Q96T75 97 aa2.13□□□□□ -2.07
LINC00649-220ENST00000628906 KANTRA0A1W2PQU2 76 aa2.12□□□□□ -2.07
LINC00649-220ENST00000628906 C8orf87E5RJ46 101 aa2.12□□□□□ -2.07
LINC00649-220ENST00000628906 PDE6GP18545 87 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms