RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 C9orf163Q8N9P6 203 aa4.73□□□□□ -1.65
PKP4-217ENST00000628904 FLG2Q5D862 2391 aaPredicted RBP4.73□□□□□ -1.65
PKP4-217ENST00000628904 OBSCN-AS1Q96MR7 158 aa4.73□□□□□ -1.65
PKP4-217ENST00000628904 A0A0U1RQV1 116 aa4.72□□□□□ -1.65
PKP4-217ENST00000628904 K7EQZ3 153 aa4.72□□□□□ -1.65
PKP4-217ENST00000628904 SMR3BP02814 79 aaPredicted RBP4.72□□□□□ -1.65
PKP4-217ENST00000628904 DNHD1Q96M86 4753 aa4.72□□□□□ -1.65
PKP4-217ENST00000628904 TRBV7-4A0A0J9YYF1 115 aa4.72□□□□□ -1.65
PKP4-217ENST00000628904 IGFL1Q6UW32 110 aa4.72□□□□□ -1.65
PKP4-217ENST00000628904 PKIGQ9Y2B9 76 aa4.72□□□□□ -1.65
PKP4-217ENST00000628904 DMBT1Q9UGM3 2413 aaPredicted RBP4.71□□□□□ -1.66
PKP4-217ENST00000628904 LOC110117498A0A087WWA1 95 aa4.71□□□□□ -1.66
PKP4-217ENST00000628904 IGHV6-1A0A0B4J1U7 121 aa4.71□□□□□ -1.66
PKP4-217ENST00000628904 IGKV4-1P06312 121 aa4.71□□□□□ -1.66
PKP4-217ENST00000628904 DNAH10Q8IVF4 4471 aa4.7□□□□□ -1.66
PKP4-217ENST00000628904 TMEM258P61165 79 aa4.7□□□□□ -1.66
PKP4-217ENST00000628904 Q8NBF4 154 aa4.7□□□□□ -1.66
PKP4-217ENST00000628904 PLA2G2DQ9UNK4 145 aa4.7□□□□□ -1.66
PKP4-217ENST00000628904 ATP5EP2Q5VTU8 51 aa4.7□□□□□ -1.66
PKP4-217ENST00000628904 PSORS1C2Q9UIG4 136 aa4.7□□□□□ -1.66
PKP4-217ENST00000628904 TLX1NBP0CAT3 122 aa4.69□□□□□ -1.66
PKP4-217ENST00000628904 BRK1Q8WUW1 75 aa4.69□□□□□ -1.66
PKP4-217ENST00000628904 HUWE1Q7Z6Z7 4374 aaKnown RBP4.69□□□□□ -1.66
PKP4-217ENST00000628904 LINC00474Q9P2X8 69 aa4.69□□□□□ -1.66
PKP4-217ENST00000628904 H3BQ85 93 aa4.69□□□□□ -1.66
PKP4-217ENST00000628904 C4orf26Q17RF5 130 aa4.69□□□□□ -1.66
PKP4-217ENST00000628904 FAM236DA0A1B0GTK5 79 aa4.68□□□□□ -1.66
PKP4-217ENST00000628904 FAM236CP0DP71 79 aa4.68□□□□□ -1.66
PKP4-217ENST00000628904 PRO0628Q9UI54 55 aa4.68□□□□□ -1.66
PKP4-217ENST00000628904 TRBV7-6A0A0J9YX20 115 aa4.68□□□□□ -1.66
PKP4-217ENST00000628904 NDUFB1O75438 58 aa4.67□□□□□ -1.66
PKP4-217ENST00000628904 KRTAP10-2P60368 255 aa4.67□□□□□ -1.66
PKP4-217ENST00000628904 LINC00208Q96KT6 92 aa4.67□□□□□ -1.66
PKP4-217ENST00000628904 CNBPP62633 177 aaKnown RBP4.67□□□□□ -1.66
PKP4-217ENST00000628904 PCOTHQ58A44 107 aa4.66□□□□□ -1.66
PKP4-217ENST00000628904 BCE1O60756 84 aa4.66□□□□□ -1.66
PKP4-217ENST00000628904 TMEM254Q8TBM7 123 aa4.66□□□□□ -1.66
PKP4-217ENST00000628904 TRAV7A0A075B6U4 112 aa4.65□□□□□ -1.67
PKP4-217ENST00000628904 WWC2-AS2Q96NR7 200 aa4.65□□□□□ -1.67
PKP4-217ENST00000628904 CXCL6P80162 114 aa4.65□□□□□ -1.67
PKP4-217ENST00000628904 CASC2Q6XLA1 102 aa4.64□□□□□ -1.67
PKP4-217ENST00000628904 SPACA4Q8TDM5 124 aa4.63□□□□□ -1.67
PKP4-217ENST00000628904 KRTAP4-16G5E9R7 235 aaPredicted RBP4.63□□□□□ -1.67
PKP4-217ENST00000628904 HCG22E2RYF7 251 aa4.63□□□□□ -1.67
PKP4-217ENST00000628904 MP68P56378 58 aa4.63□□□□□ -1.67
PKP4-217ENST00000628904 IGLV5-48A0A075B6I7 105 aa4.62□□□□□ -1.67
PKP4-217ENST00000628904 SPRR1AP35321 89 aa4.62□□□□□ -1.67
PKP4-217ENST00000628904 PRKDCP78527 4128 aaKnown RBP4.61□□□□□ -1.67
PKP4-217ENST00000628904 DSCR10P59022 87 aa4.61□□□□□ -1.67
PKP4-217ENST00000628904 LINC00336Q6ZUF6 198 aa4.61□□□□□ -1.67
PKP4-217ENST00000628904 Q6ZRN7 208 aaPredicted RBP4.6□□□□□ -1.67
PKP4-217ENST00000628904 SEC61GP60059 68 aa4.6□□□□□ -1.67
PKP4-217ENST00000628904 PLECQ15149 4684 aaKnown RBP4.6□□□□□ -1.67
PKP4-217ENST00000628904 IGLV5-37A0A075B6J1 123 aa4.6□□□□□ -1.67
PKP4-217ENST00000628904 ZNF861PO60384 105 aa4.59□□□□□ -1.68
PKP4-217ENST00000628904 SPRR4Q96PI1 79 aa4.58□□□□□ -1.68
PKP4-217ENST00000628904 H0Y9P7 68 aa4.57□□□□□ -1.68
PKP4-217ENST00000628904 A0A0A0MQY5 61 aa4.57□□□□□ -1.68
PKP4-217ENST00000628904 KRTAP10-1P60331 282 aa4.57□□□□□ -1.68
PKP4-217ENST00000628904 ZNF706Q9Y5V0 76 aaPredicted RBP4.57□□□□□ -1.68
PKP4-217ENST00000628904 DNAH9Q9NYC9 4486 aa4.56□□□□□ -1.68
PKP4-217ENST00000628904 PLA2G1BP04054 148 aaKnown RBP4.56□□□□□ -1.68
PKP4-217ENST00000628904 DNAH7Q8WXX0 4024 aa4.56□□□□□ -1.68
PKP4-217ENST00000628904 hDV103S1A0JD37 113 aa4.56□□□□□ -1.68
PKP4-217ENST00000628904 IGLV7-43P04211 117 aa4.56□□□□□ -1.68
PKP4-217ENST00000628904 SERP1Q9Y6X1 66 aa4.56□□□□□ -1.68
PKP4-217ENST00000628904 H7BZZ5 65 aa4.55□□□□□ -1.68
PKP4-217ENST00000628904 PSPHP1O15172 72 aa4.55□□□□□ -1.68
PKP4-217ENST00000628904 FP248Q71RG6 208 aaPredicted RBP4.55□□□□□ -1.68
PKP4-217ENST00000628904 KMT2AQ03164 3969 aa4.55□□□□□ -1.68
PKP4-217ENST00000628904 STARD9Q9P2P6 4700 aa4.54□□□□□ -1.68
PKP4-217ENST00000628904 PRR15Q8IV56 129 aa4.54□□□□□ -1.68
PKP4-217ENST00000628904 SPTSSBQ8NFR3 76 aa4.54□□□□□ -1.68
PKP4-217ENST00000628904 CMYA5Q8N3K9 4069 aa4.54□□□□□ -1.68
PKP4-217ENST00000628904 Q6ZR54 194 aa4.54□□□□□ -1.68
PKP4-217ENST00000628904 C1orf64Q8NEQ6 169 aa4.54□□□□□ -1.68
PKP4-217ENST00000628904 V9GYY9 64 aa4.53□□□□□ -1.68
PKP4-217ENST00000628904 SMIM26A0A096LP01 95 aa4.52□□□□□ -1.69
PKP4-217ENST00000628904 A0A087X002 238 aa4.52□□□□□ -1.69
PKP4-217ENST00000628904 A8MWP4 228 aa4.52□□□□□ -1.69
PKP4-217ENST00000628904 NOTCH2NLQ7Z3S9 236 aa4.52□□□□□ -1.69
PKP4-217ENST00000628904 OCR1Q9BZK8 76 aa4.52□□□□□ -1.69
PKP4-217ENST00000628904 IGKV2D-30A0A075B6S6 120 aa4.51□□□□□ -1.69
PKP4-217ENST00000628904 IGKV2-30P06310 120 aa4.51□□□□□ -1.69
PKP4-217ENST00000628904 TYMSOSQ8TAI1 123 aa4.51□□□□□ -1.69
PKP4-217ENST00000628904 PRR26Q8N8Z3 221 aa4.5□□□□□ -1.69
PKP4-217ENST00000628904 C9orf92A6NGG3 77 aa4.5□□□□□ -1.69
PKP4-217ENST00000628904 C1orf195Q5TG92 126 aa4.49□□□□□ -1.69
PKP4-217ENST00000628904 SPINK1P00995 79 aa4.49□□□□□ -1.69
PKP4-217ENST00000628904 PLAC8Q9NZF1 115 aa4.49□□□□□ -1.69
PKP4-217ENST00000628904 KLKP1Q107X0 134 aa4.49□□□□□ -1.69
PKP4-217ENST00000628904 KRTAP3-3Q9BYR6 98 aa4.48□□□□□ -1.69
PKP4-217ENST00000628904 KRTAP3-2Q9BYR7 98 aa4.48□□□□□ -1.69
PKP4-217ENST00000628904 C8orf17Q9NRJ1 99 aa4.47□□□□□ -1.69
PKP4-217ENST00000628904 TRAV22A0A0B4J277 110 aa4.47□□□□□ -1.69
PKP4-217ENST00000628904 FAM229BQ4G0N7 80 aa4.47□□□□□ -1.69
PKP4-217ENST00000628904 LINC00472Q9H8W2 130 aa4.46□□□□□ -1.69
PKP4-217ENST00000628904 NDUFC1O43677 76 aa4.46□□□□□ -1.7
PKP4-217ENST00000628904 CHKB-CPT1BH3BT56 60 aa4.45□□□□□ -1.7
PKP4-217ENST00000628904 Q96NJ1 140 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms