RNA–Protein interactions for RNA: ENST00000628391.1

TCF4-264, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 201 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-264ENST00000628391 CHD7Q9P2D1 2997 aa1.08□□□□□ -2.24
TCF4-264ENST00000628391 ZFYVE26Q68DK2 2539 aa1.08□□□□□ -2.24
TCF4-264ENST00000628391 DMXL1Q9Y485 3027 aa1.07□□□□□ -2.24
TCF4-264ENST00000628391 FRYQ5TBA9 3013 aa1.07□□□□□ -2.24
TCF4-264ENST00000628391 A0A096LNI7 61 aa1.07□□□□□ -2.24
TCF4-264ENST00000628391 DEFB4AO15263 64 aa1.07□□□□□ -2.24
TCF4-264ENST00000628391 TPRXLQ17RH7 258 aa1.07□□□□□ -2.24
TCF4-264ENST00000628391 KRTAP13-1Q8IUC0 172 aa1.07□□□□□ -2.24
TCF4-264ENST00000628391 KRTAP17-1Q9BYP8 105 aa1.07□□□□□ -2.24
TCF4-264ENST00000628391 CRIPTQ9P021 101 aa1.07□□□□□ -2.24
TCF4-264ENST00000628391 ANKRD17O75179 2603 aaKnown RBP1.07□□□□□ -2.24
TCF4-264ENST00000628391 TPRP12270 2363 aaKnown RBP1.07□□□□□ -2.24
TCF4-264ENST00000628391 COL6A6A6NMZ7 2263 aa1.06□□□□□ -2.24
TCF4-264ENST00000628391 CNOT1A5YKK6 2376 aaKnown RBP1.06□□□□□ -2.24
TCF4-264ENST00000628391 RYR3Q15413 4870 aa1.06□□□□□ -2.24
TCF4-264ENST00000628391 SPINK1P00995 79 aa1.06□□□□□ -2.24
TCF4-264ENST00000628391 RPL37P61927 97 aaKnown RBP1.06□□□□□ -2.24
TCF4-264ENST00000628391 KRTAP24-1Q3LI83 254 aa1.06□□□□□ -2.24
TCF4-264ENST00000628391 C14orf177Q52M58 125 aa1.06□□□□□ -2.24
TCF4-264ENST00000628391 TYMSOSQ8TAI1 123 aa1.06□□□□□ -2.24
TCF4-264ENST00000628391 WWC2-AS2Q96NR7 200 aa1.06□□□□□ -2.24
TCF4-264ENST00000628391 CHD9Q3L8U1 2897 aa1.06□□□□□ -2.24
TCF4-264ENST00000628391 ABCA12Q86UK0 2595 aa1.06□□□□□ -2.24
TCF4-264ENST00000628391 ZFHX2Q9C0A1 2572 aaPredicted RBP1.06□□□□□ -2.24
TCF4-264ENST00000628391 PTPRZ1P23471 2315 aaPredicted RBP1.06□□□□□ -2.24
TCF4-264ENST00000628391 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.06□□□□□ -2.24
TCF4-264ENST00000628391 ITPR3Q14573 2671 aa1.06□□□□□ -2.24
TCF4-264ENST00000628391 UBR4Q5T4S7 5183 aa1.06□□□□□ -2.24
TCF4-264ENST00000628391 CSMD1Q96PZ7 3565 aa1.06□□□□□ -2.24
TCF4-264ENST00000628391 MYO18BQ8IUG5 2567 aa1.05□□□□□ -2.24
TCF4-264ENST00000628391 USP24Q9UPU5 2620 aa1.05□□□□□ -2.24
TCF4-264ENST00000628391 ALMS1Q8TCU4 4167 aa1.05□□□□□ -2.24
TCF4-264ENST00000628391 COL12A1Q99715 3063 aa1.05□□□□□ -2.24
TCF4-264ENST00000628391 PCNX1Q96RV3 2341 aa1.05□□□□□ -2.24
TCF4-264ENST00000628391 ZNF462Q96JM2 2506 aa1.05□□□□□ -2.24
TCF4-264ENST00000628391 KALRNO60229 2985 aa1.05□□□□□ -2.24
TCF4-264ENST00000628391 SPINK6Q6UWN8 80 aa1.05□□□□□ -2.24
TCF4-264ENST00000628391 APC2O95996 2303 aa1.05□□□□□ -2.24
TCF4-264ENST00000628391 ACACBO00763 2458 aa1.05□□□□□ -2.24
TCF4-264ENST00000628391 MYO9AB2RTY4 2548 aa1.05□□□□□ -2.24
TCF4-264ENST00000628391 ANKHD1Q8IWZ3 2542 aaKnown RBP1.05□□□□□ -2.24
TCF4-264ENST00000628391 TRIOO75962 3097 aa1.04□□□□□ -2.24
TCF4-264ENST00000628391 SPENQ96T58 3664 aaKnown RBP1.04□□□□□ -2.24
TCF4-264ENST00000628391 FBN3Q75N90 2809 aa1.04□□□□□ -2.24
TCF4-264ENST00000628391 ROS1P08922 2347 aa1.04□□□□□ -2.24
TCF4-264ENST00000628391 MGAQ8IWI9 3026 aa1.04□□□□□ -2.24
TCF4-264ENST00000628391 NCOR1O75376 2440 aa1.04□□□□□ -2.24
TCF4-264ENST00000628391 DOPEY1Q5JWR5 2465 aa1.04□□□□□ -2.24
TCF4-264ENST00000628391 C10orf95Q9H7T3 257 aa1.04□□□□□ -2.24
TCF4-264ENST00000628391 HECTD1Q9ULT8 2610 aa1.04□□□□□ -2.24
TCF4-264ENST00000628391 NBEAQ8NFP9 2946 aa1.04□□□□□ -2.24
TCF4-264ENST00000628391 CACNA1HO95180 2353 aa1.04□□□□□ -2.24
TCF4-264ENST00000628391 FREM2Q5SZK8 3169 aa1.04□□□□□ -2.24
TCF4-264ENST00000628391 FRYLO94915 3013 aa1.03□□□□□ -2.24
TCF4-264ENST00000628391 PCLOQ9Y6V0 5065 aa1.03□□□□□ -2.24
TCF4-264ENST00000628391 RP1L1Q8IWN7 2480 aaPredicted RBP1.03□□□□□ -2.24
TCF4-264ENST00000628391 Q8N1X5 172 aa1.03□□□□□ -2.24
TCF4-264ENST00000628391 EPPK1P58107 5090 aaKnown RBP1.03□□□□□ -2.24
TCF4-264ENST00000628391 AKAP6Q13023 2319 aa1.03□□□□□ -2.25
TCF4-264ENST00000628391 BIRC6Q9NR09 4857 aa1.03□□□□□ -2.25
TCF4-264ENST00000628391 CFAP46Q8IYW2 2715 aa1.02□□□□□ -2.25
TCF4-264ENST00000628391 TENM4Q6N022 2769 aa1.02□□□□□ -2.25
TCF4-264ENST00000628391 UBR5O95071 2799 aaPredicted RBP1.02□□□□□ -2.25
TCF4-264ENST00000628391 RYR1P21817 5038 aa1.02□□□□□ -2.25
TCF4-264ENST00000628391 ACACAQ13085 2346 aa1.02□□□□□ -2.25
TCF4-264ENST00000628391 HYDINQ4G0P3 5121 aa1.02□□□□□ -2.25
TCF4-264ENST00000628391 XP32Q5T750 250 aa1.02□□□□□ -2.25
TCF4-264ENST00000628391 TEX15Q9BXT5 2789 aa1.02□□□□□ -2.25
TCF4-264ENST00000628391 FBN2P35556 2912 aa1.02□□□□□ -2.25
TCF4-264ENST00000628391 PIEZO2Q9H5I5 2752 aa1.02□□□□□ -2.25
TCF4-264ENST00000628391 MAPK1IP1LQ8NDC0 245 aa1.01□□□□□ -2.25
TCF4-264ENST00000628391 SPACA4Q8TDM5 124 aa1.01□□□□□ -2.25
TCF4-264ENST00000628391 PLAC4Q8WY50 150 aa1.01□□□□□ -2.25
TCF4-264ENST00000628391 PRO2289Q9P1D8 64 aa1.01□□□□□ -2.25
TCF4-264ENST00000628391 S4R3F8 94 aa1.01□□□□□ -2.25
TCF4-264ENST00000628391 HELZ2Q9BYK8 2649 aaKnown RBP1.01□□□□□ -2.25
TCF4-264ENST00000628391 KMT2CQ8NEZ4 4911 aaKnown RBP1□□□□□ -2.25
TCF4-264ENST00000628391 FAM208BQ5VWN6 2430 aa1□□□□□ -2.25
TCF4-264ENST00000628391 NBASA2RRP1 2371 aa1□□□□□ -2.25
TCF4-264ENST00000628391 TENM2Q9NT68 2774 aa1□□□□□ -2.25
TCF4-264ENST00000628391 POLQO75417 2590 aa1□□□□□ -2.25
TCF4-264ENST00000628391 CSMD2Q7Z408 3487 aa0.99□□□□□ -2.25
TCF4-264ENST00000628391 IGF2RP11717 2491 aa0.99□□□□□ -2.25
TCF4-264ENST00000628391 NOTCH2Q04721 2471 aa0.99□□□□□ -2.25
TCF4-264ENST00000628391 RIF1Q5UIP0 2472 aaKnown RBP0.99□□□□□ -2.25
TCF4-264ENST00000628391 DSPP15924 2871 aaKnown RBP0.99□□□□□ -2.25
TCF4-264ENST00000628391 C2CD3Q4AC94 2353 aa0.99□□□□□ -2.25
TCF4-264ENST00000628391 A0A0D9SG42 100 aa0.99□□□□□ -2.25
TCF4-264ENST00000628391 KRTAP13-4Q3LI77 160 aa0.99□□□□□ -2.25
TCF4-264ENST00000628391 Q6ZRN7 208 aaPredicted RBP0.99□□□□□ -2.25
TCF4-264ENST00000628391 KRTAP3-2Q9BYR7 98 aa0.99□□□□□ -2.25
TCF4-264ENST00000628391 APLNQ9ULZ1 77 aa0.99□□□□□ -2.25
TCF4-264ENST00000628391 CELSR2Q9HCU4 2923 aa0.99□□□□□ -2.25
TCF4-264ENST00000628391 GVINP1Q7Z2Y8 2422 aa0.98□□□□□ -2.25
TCF4-264ENST00000628391 LAMA1P25391 3075 aa0.98□□□□□ -2.25
TCF4-264ENST00000628391 BOD1L1Q8NFC6 3051 aa0.98□□□□□ -2.25
TCF4-264ENST00000628391 FN1P02751 2386 aaKnown RBP0.98□□□□□ -2.25
TCF4-264ENST00000628391 DMXL2Q8TDJ6 3036 aa0.98□□□□□ -2.25
TCF4-264ENST00000628391 HRNRQ86YZ3 2850 aaPredicted RBP0.98□□□□□ -2.25
TCF4-264ENST00000628391 KRTAP12-2P59991 146 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms