RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 NDUFV3P56181 108 aaKnown RBP4.64□□□□□ -1.67
PTP4A1-206ENST00000627002 LINC01547P58512 204 aaPredicted RBP4.64□□□□□ -1.67
PTP4A1-206ENST00000627002 C21orf62-AS1Q17RA5 79 aa4.64□□□□□ -1.67
PTP4A1-206ENST00000627002 Q8N377 158 aa4.64□□□□□ -1.67
PTP4A1-206ENST00000627002 DEFB105AQ8NG35 78 aa4.64□□□□□ -1.67
PTP4A1-206ENST00000627002 H3BS24 57 aa4.63□□□□□ -1.67
PTP4A1-206ENST00000627002 ZNF861PO60384 105 aa4.63□□□□□ -1.67
PTP4A1-206ENST00000627002 RBM3P98179 157 aaKnown RBP4.63□□□□□ -1.67
PTP4A1-206ENST00000627002 ST20-AS1Q8NBB2 130 aa4.63□□□□□ -1.67
PTP4A1-206ENST00000627002 ZNF706Q9Y5V0 76 aaPredicted RBP4.63□□□□□ -1.67
PTP4A1-206ENST00000627002 IGLV7-43P04211 117 aa4.62□□□□□ -1.67
PTP4A1-206ENST00000627002 PDE6GP18545 87 aa4.62□□□□□ -1.67
PTP4A1-206ENST00000627002 DSCR8Q96T75 97 aa4.62□□□□□ -1.67
PTP4A1-206ENST00000627002 KRTAP4-7Q9BYR0 210 aa4.62□□□□□ -1.67
PTP4A1-206ENST00000627002 C14orf132Q9NPU4 83 aa4.62□□□□□ -1.67
PTP4A1-206ENST00000627002 FAT2Q9NYQ8 4349 aa4.62□□□□□ -1.67
PTP4A1-206ENST00000627002 LOC110117498A0A087WWA1 95 aa4.61□□□□□ -1.67
PTP4A1-206ENST00000627002 SPRR1BP22528 89 aa4.61□□□□□ -1.67
PTP4A1-206ENST00000627002 KIAA1109Q2LD37 5005 aa4.61□□□□□ -1.67
PTP4A1-206ENST00000627002 A0A1B0GV72 72 aa4.6□□□□□ -1.67
PTP4A1-206ENST00000627002 FAM240AA0A1B0GVK7 77 aa4.6□□□□□ -1.67
PTP4A1-206ENST00000627002 F8WEM9 126 aa4.6□□□□□ -1.67
PTP4A1-206ENST00000627002 ACYP1P07311 99 aa4.6□□□□□ -1.67
PTP4A1-206ENST00000627002 HAMPP81172 84 aa4.6□□□□□ -1.67
PTP4A1-206ENST00000627002 PKD1P98161 4303 aa4.6□□□□□ -1.67
PTP4A1-206ENST00000627002 CCKP06307 115 aa4.59□□□□□ -1.67
PTP4A1-206ENST00000627002 GAGE2AQ6NT46 116 aa4.59□□□□□ -1.67
PTP4A1-206ENST00000627002 Q6ZQT0 140 aa4.59□□□□□ -1.67
PTP4A1-206ENST00000627002 SPRR4Q96PI1 79 aa4.59□□□□□ -1.67
PTP4A1-206ENST00000627002 DNAH11Q96DT5 4516 aa4.59□□□□□ -1.68
PTP4A1-206ENST00000627002 RYR1P21817 5038 aa4.58□□□□□ -1.68
PTP4A1-206ENST00000627002 TRBV7-4A0A0J9YYF1 115 aa4.58□□□□□ -1.68
PTP4A1-206ENST00000627002 XGP55808 180 aa4.58□□□□□ -1.68
PTP4A1-206ENST00000627002 LINC00483Q53H64 154 aa4.58□□□□□ -1.68
PTP4A1-206ENST00000627002 SMIM29Q86T20 159 aa4.58□□□□□ -1.68
PTP4A1-206ENST00000627002 C3orf22Q8N5N4 141 aa4.58□□□□□ -1.68
PTP4A1-206ENST00000627002 IGLV8-61A0A075B6I0 122 aa4.57□□□□□ -1.68
PTP4A1-206ENST00000627002 RPL37AP61513 92 aaKnown RBP4.57□□□□□ -1.68
PTP4A1-206ENST00000627002 KRTAP9-7A8MTY7 169 aa4.56□□□□□ -1.68
PTP4A1-206ENST00000627002 Q6JHZ5 121 aa4.56□□□□□ -1.68
PTP4A1-206ENST00000627002 VPS25Q9BRG1 176 aa4.56□□□□□ -1.68
PTP4A1-206ENST00000627002 A0A1B0GW54 56 aa4.55□□□□□ -1.68
PTP4A1-206ENST00000627002 KRTAP4-5Q9BYR2 181 aa4.55□□□□□ -1.68
PTP4A1-206ENST00000627002 KRTAP4-9Q9BYQ8 210 aa4.54□□□□□ -1.68
PTP4A1-206ENST00000627002 CDIP1Q9H305 208 aa4.54□□□□□ -1.68
PTP4A1-206ENST00000627002 DNAH5Q8TE73 4624 aa4.54□□□□□ -1.68
PTP4A1-206ENST00000627002 CDK2AP2O75956 126 aa4.53□□□□□ -1.68
PTP4A1-206ENST00000627002 IGFL1Q6UW32 110 aa4.53□□□□□ -1.68
PTP4A1-206ENST00000627002 SPINK6Q6UWN8 80 aa4.53□□□□□ -1.68
PTP4A1-206ENST00000627002 Q8NBF4 154 aa4.53□□□□□ -1.68
PTP4A1-206ENST00000627002 DNAH8Q96JB1 4490 aa4.52□□□□□ -1.69
PTP4A1-206ENST00000627002 IGLV9-49A0A0B4J1Y8 123 aa4.52□□□□□ -1.69
PTP4A1-206ENST00000627002 SMR3BP02814 79 aaPredicted RBP4.52□□□□□ -1.69
PTP4A1-206ENST00000627002 C9orf153Q5TBE3 101 aa4.52□□□□□ -1.69
PTP4A1-206ENST00000627002 UBL5Q9BZL1 73 aa4.52□□□□□ -1.69
PTP4A1-206ENST00000627002 LINC00846Q9NV44 126 aa4.52□□□□□ -1.69
PTP4A1-206ENST00000627002 PKHD1P08F94 4074 aa4.51□□□□□ -1.69
PTP4A1-206ENST00000627002 A0A1W2PNM2 257 aa4.51□□□□□ -1.69
PTP4A1-206ENST00000627002 PLA2G1BP04054 148 aaKnown RBP4.51□□□□□ -1.69
PTP4A1-206ENST00000627002 FAM229BQ4G0N7 80 aa4.51□□□□□ -1.69
PTP4A1-206ENST00000627002 Q6Q795 121 aa4.51□□□□□ -1.69
PTP4A1-206ENST00000627002 Q8N1X5 172 aa4.51□□□□□ -1.69
PTP4A1-206ENST00000627002 ABCA13Q86UQ4 5058 aa4.5□□□□□ -1.69
PTP4A1-206ENST00000627002 CRYGAP11844 174 aa4.5□□□□□ -1.69
PTP4A1-206ENST00000627002 MOBPQ13875 183 aa4.5□□□□□ -1.69
PTP4A1-206ENST00000627002 LINC00643Q86TS7 51 aa4.5□□□□□ -1.69
PTP4A1-206ENST00000627002 ANAPC11Q9NYG5 84 aa4.5□□□□□ -1.69
PTP4A1-206ENST00000627002 SSBP3-AS1Q7Z2R9 100 aa4.49□□□□□ -1.69
PTP4A1-206ENST00000627002 SIGMAR1Q99720 223 aa4.49□□□□□ -1.69
PTP4A1-206ENST00000627002 TRBV7-7A0A0K0K1E9 115 aa4.48□□□□□ -1.69
PTP4A1-206ENST00000627002 KRTAP10-4P60372 401 aaPredicted RBP4.48□□□□□ -1.69
PTP4A1-206ENST00000627002 NREPQ16612 68 aa4.48□□□□□ -1.69
PTP4A1-206ENST00000627002 ATP5EP2Q5VTU8 51 aa4.48□□□□□ -1.69
PTP4A1-206ENST00000627002 A0A0G2JQZ4 141 aa4.47□□□□□ -1.69
PTP4A1-206ENST00000627002 KRTAP1-4P0C5Y4 121 aa4.47□□□□□ -1.69
PTP4A1-206ENST00000627002 Q6ZVQ6 151 aa4.47□□□□□ -1.69
PTP4A1-206ENST00000627002 LRP1BQ9NZR2 4599 aa4.46□□□□□ -1.7
PTP4A1-206ENST00000627002 MT-ATP8P03928 68 aa4.46□□□□□ -1.7
PTP4A1-206ENST00000627002 DYNC1H1Q14204 4646 aaKnown RBP4.45□□□□□ -1.7
PTP4A1-206ENST00000627002 A0A087WSZ3 146 aa4.45□□□□□ -1.7
PTP4A1-206ENST00000627002 A0A087X002 238 aa4.45□□□□□ -1.7
PTP4A1-206ENST00000627002 CD164Q04900 197 aa4.45□□□□□ -1.7
PTP4A1-206ENST00000627002 KRTAP19-4Q3LI73 84 aa4.45□□□□□ -1.7
PTP4A1-206ENST00000627002 Q5VSD8 79 aa4.45□□□□□ -1.7
PTP4A1-206ENST00000627002 KRTAP4-2Q9BYR5 136 aa4.45□□□□□ -1.7
PTP4A1-206ENST00000627002 CXCL6P80162 114 aa4.44□□□□□ -1.7
PTP4A1-206ENST00000627002 KRTAP13-2Q52LG2 175 aa4.44□□□□□ -1.7
PTP4A1-206ENST00000627002 IMUPQ9GZP8 106 aa4.44□□□□□ -1.7
PTP4A1-206ENST00000627002 SS18L2Q9UHA2 77 aa4.44□□□□□ -1.7
PTP4A1-206ENST00000627002 VPS13BQ7Z7G8 4022 aa4.43□□□□□ -1.7
PTP4A1-206ENST00000627002 TYMSOSQ8TAI1 123 aa4.43□□□□□ -1.7
PTP4A1-206ENST00000627002 SRRM2Q9UQ35 2752 aaKnown RBP4.42□□□□□ -1.7
PTP4A1-206ENST00000627002 IGKV3D-7A0A0C4DH55 119 aa4.42□□□□□ -1.7
PTP4A1-206ENST00000627002 BPY2O14599 106 aa4.42□□□□□ -1.7
PTP4A1-206ENST00000627002 HRCT1Q6UXD1 115 aa4.42□□□□□ -1.7
PTP4A1-206ENST00000627002 HSPG2P98160 4391 aa4.41□□□□□ -1.7
PTP4A1-206ENST00000627002 J3KT08 172 aa4.4□□□□□ -1.71
PTP4A1-206ENST00000627002 SCGB1A1P11684 91 aa4.4□□□□□ -1.71
PTP4A1-206ENST00000627002 PRR26Q8N8Z3 221 aa4.4□□□□□ -1.71
PTP4A1-206ENST00000627002 APOBP04114 4563 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms