RNA–Protein interactions for RNA: ENST00000625668.2

LINC02028-223, Transcript of long intergenic non-protein coding RNA 2028, human

TSL 5

Gene LINC02028, Length 646 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC02028-223	ENST00000625668	ZNF706	Q9Y5V0	76 aa	Predicted RBP	4	□□□□□ -1.77
LINC02028-223	ENST00000625668		A4D1N5	150 aa		3.99	□□□□□ -1.77
LINC02028-223	ENST00000625668	C6orf99	Q4VX62	202 aa		3.99	□□□□□ -1.77
LINC02028-223	ENST00000625668	SLC25A34	Q6PIV7	304 aa		3.99	□□□□□ -1.77
LINC02028-223	ENST00000625668	C2orf91	Q6ZV80	131 aa		3.99	□□□□□ -1.77
LINC02028-223	ENST00000625668	COX7B	P24311	80 aa		3.98	□□□□□ -1.77
LINC02028-223	ENST00000625668	HINT1	P49773	126 aa	Predicted RBP	3.98	□□□□□ -1.77
LINC02028-223	ENST00000625668	ELOF1	P60002	83 aa	Known RBP	3.98	□□□□□ -1.77
LINC02028-223	ENST00000625668	SMIM29	Q86T20	159 aa		3.98	□□□□□ -1.77
LINC02028-223	ENST00000625668	TYMSOS	Q8TAI1	123 aa		3.98	□□□□□ -1.77
LINC02028-223	ENST00000625668	C12orf57	Q99622	126 aa		3.98	□□□□□ -1.77
LINC02028-223	ENST00000625668	TRAV13-2	A0A0B4J235	113 aa		3.97	□□□□□ -1.77
LINC02028-223	ENST00000625668	LINC00483	Q53H64	154 aa		3.97	□□□□□ -1.77
LINC02028-223	ENST00000625668	GAGE2A	Q6NT46	116 aa		3.97	□□□□□ -1.77
LINC02028-223	ENST00000625668	C3orf22	Q8N5N4	141 aa		3.97	□□□□□ -1.77
LINC02028-223	ENST00000625668	ST20-AS1	Q8NBB2	130 aa		3.97	□□□□□ -1.77
LINC02028-223	ENST00000625668	SMIM11B	Q8TCY0	68 aa		3.97	□□□□□ -1.77
LINC02028-223	ENST00000625668	HIGD1B	Q9P298	99 aa		3.97	□□□□□ -1.77
LINC02028-223	ENST00000625668	OBSCN	Q5VST9	7968 aa		3.97	□□□□□ -1.77
LINC02028-223	ENST00000625668	TRBV7-6	A0A0J9YX20	115 aa		3.96	□□□□□ -1.78
LINC02028-223	ENST00000625668	LCE3C	Q5T5A8	94 aa		3.96	□□□□□ -1.78
LINC02028-223	ENST00000625668	DHRS4-AS1	Q9P1J3	65 aa		3.96	□□□□□ -1.78
LINC02028-223	ENST00000625668		A0A1B0GWB2	263 aa		3.95	□□□□□ -1.78
LINC02028-223	ENST00000625668	IGLV9-49	A0A0B4J1Y8	123 aa		3.94	□□□□□ -1.78
LINC02028-223	ENST00000625668	TSPAN13	O95857	204 aa		3.94	□□□□□ -1.78
LINC02028-223	ENST00000625668	TAL2	Q16559	108 aa		3.94	□□□□□ -1.78
LINC02028-223	ENST00000625668	LINC00304	Q8N9R0	145 aa		3.94	□□□□□ -1.78
LINC02028-223	ENST00000625668		A0A0B4J2C4	111 aa		3.93	□□□□□ -1.78
LINC02028-223	ENST00000625668		H7C2G1	150 aa		3.93	□□□□□ -1.78
LINC02028-223	ENST00000625668	CFC1B	P0CG36	223 aa		3.93	□□□□□ -1.78
LINC02028-223	ENST00000625668	CFC1	P0CG37	223 aa		3.93	□□□□□ -1.78
LINC02028-223	ENST00000625668	MOBP	Q13875	183 aa		3.93	□□□□□ -1.78
LINC02028-223	ENST00000625668	CEND1	Q8N111	149 aa		3.93	□□□□□ -1.78
LINC02028-223	ENST00000625668		Q8NBF4	154 aa		3.93	□□□□□ -1.78
LINC02028-223	ENST00000625668	RAB37	Q96AX2	223 aa		3.93	□□□□□ -1.78
LINC02028-223	ENST00000625668	SPRR1B	P22528	89 aa		3.92	□□□□□ -1.78
LINC02028-223	ENST00000625668	FXYD2	P54710	66 aa		3.92	□□□□□ -1.78
LINC02028-223	ENST00000625668	HSD52	Q0P140	79 aa		3.92	□□□□□ -1.78
LINC02028-223	ENST00000625668	C9orf153	Q5TBE3	101 aa		3.92	□□□□□ -1.78
LINC02028-223	ENST00000625668	NHP2	Q9NX24	153 aa	Known RBP	3.92	□□□□□ -1.78
LINC02028-223	ENST00000625668	UQCR10	Q9UDW1	63 aa		3.92	□□□□□ -1.78
LINC02028-223	ENST00000625668	FSIP2	Q5CZC0	6907 aa		3.92	□□□□□ -1.78
LINC02028-223	ENST00000625668		K7ERJ3	54 aa		3.91	□□□□□ -1.78
LINC02028-223	ENST00000625668	SMIM6	P0DI80	62 aa		3.91	□□□□□ -1.78
LINC02028-223	ENST00000625668	VAMP3	Q15836	100 aa		3.91	□□□□□ -1.78
LINC02028-223	ENST00000625668	LINC00575	Q6W349	94 aa		3.91	□□□□□ -1.78
LINC02028-223	ENST00000625668	DEFB105A	Q8NG35	78 aa		3.91	□□□□□ -1.78
LINC02028-223	ENST00000625668	IGLV5-48	A0A075B6I7	105 aa		3.9	□□□□□ -1.79
LINC02028-223	ENST00000625668	SLC25A20	O43772	301 aa		3.9	□□□□□ -1.79
LINC02028-223	ENST00000625668	LINC01547	P58512	204 aa	Predicted RBP	3.9	□□□□□ -1.79
LINC02028-223	ENST00000625668	PRR4	Q16378	134 aa		3.9	□□□□□ -1.79
LINC02028-223	ENST00000625668		Q1RN00	199 aa		3.9	□□□□□ -1.79
LINC02028-223	ENST00000625668	BVES-AS1	Q5T3Y7	98 aa		3.9	□□□□□ -1.79
LINC02028-223	ENST00000625668	RETNLB	Q9BQ08	111 aa		3.9	□□□□□ -1.79
LINC02028-223	ENST00000625668	PRO1933	Q9H354	126 aa		3.9	□□□□□ -1.79
LINC02028-223	ENST00000625668	TEX49	A0A1B0GTD5	131 aa		3.89	□□□□□ -1.79
LINC02028-223	ENST00000625668	LOC105371267	A0A1B0GV96	52 aa		3.89	□□□□□ -1.79
LINC02028-223	ENST00000625668	hADV29S1	A0JD25	119 aa		3.89	□□□□□ -1.79
LINC02028-223	ENST00000625668	SPAG11A	Q6PDA7	123 aa		3.89	□□□□□ -1.79
LINC02028-223	ENST00000625668		Q6ZQY7	126 aa		3.89	□□□□□ -1.79
LINC02028-223	ENST00000625668	SSBP3-AS1	Q7Z2R9	100 aa		3.89	□□□□□ -1.79
LINC02028-223	ENST00000625668	LAMTOR3	Q9UHA4	124 aa		3.89	□□□□□ -1.79
LINC02028-223	ENST00000625668	PRO1854	Q9UHT4	67 aa		3.89	□□□□□ -1.79
LINC02028-223	ENST00000625668	SPINK1	P00995	79 aa		3.87	□□□□□ -1.79
LINC02028-223	ENST00000625668	CTAG1A	P78358	180 aa		3.87	□□□□□ -1.79
LINC02028-223	ENST00000625668		Q8N377	158 aa		3.87	□□□□□ -1.79
LINC02028-223	ENST00000625668	FAM218A	Q96MZ4	157 aa		3.87	□□□□□ -1.79
LINC02028-223	ENST00000625668	CRCT1	Q9UGL9	99 aa		3.87	□□□□□ -1.79
LINC02028-223	ENST00000625668		H0YGX0	51 aa		3.86	□□□□□ -1.79
LINC02028-223	ENST00000625668	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	3.86	□□□□□ -1.79
LINC02028-223	ENST00000625668		A0A0G2JQZ4	141 aa		3.85	□□□□□ -1.79
LINC02028-223	ENST00000625668	PSMB2	P49721	201 aa		3.85	□□□□□ -1.79
LINC02028-223	ENST00000625668	RPS29	P62273	56 aa	Known RBP	3.85	□□□□□ -1.79
LINC02028-223	ENST00000625668	HRCT1	Q6UXD1	115 aa		3.85	□□□□□ -1.79
LINC02028-223	ENST00000625668		F8WEM9	126 aa		3.84	□□□□□ -1.79
LINC02028-223	ENST00000625668	TSTD3	H0UI37	97 aa		3.84	□□□□□ -1.79
LINC02028-223	ENST00000625668	CLEC2B	Q92478	149 aa		3.84	□□□□□ -1.79
LINC02028-223	ENST00000625668	KRTAP4-3	Q9BYR4	195 aa		3.84	□□□□□ -1.79
LINC02028-223	ENST00000625668	IGLV7-46	A0A075B6I9	117 aa		3.83	□□□□□ -1.8
LINC02028-223	ENST00000625668		M0R143	59 aa		3.83	□□□□□ -1.8
LINC02028-223	ENST00000625668	SNCG	O76070	127 aa		3.83	□□□□□ -1.8
LINC02028-223	ENST00000625668	PPDPFL	Q8WWR9	84 aa		3.83	□□□□□ -1.8
LINC02028-223	ENST00000625668	LPA	P08519	4548 aa		3.82	□□□□□ -1.8
LINC02028-223	ENST00000625668		A0A0A0MQY5	61 aa		3.82	□□□□□ -1.8
LINC02028-223	ENST00000625668		A0A1B0GX51	115 aa		3.82	□□□□□ -1.8
LINC02028-223	ENST00000625668	CD164	Q04900	197 aa		3.82	□□□□□ -1.8
LINC02028-223	ENST00000625668	FP248	Q71RG6	208 aa	Predicted RBP	3.82	□□□□□ -1.8
LINC02028-223	ENST00000625668	LIMD2	Q9BT23	127 aa		3.82	□□□□□ -1.8
LINC02028-223	ENST00000625668	IGLV8-61	A0A075B6I0	122 aa		3.81	□□□□□ -1.8
LINC02028-223	ENST00000625668		H3BUT2	72 aa		3.81	□□□□□ -1.8
LINC02028-223	ENST00000625668	COX6C	P09669	75 aa		3.81	□□□□□ -1.8
LINC02028-223	ENST00000625668	TPRXL	Q17RH7	258 aa		3.81	□□□□□ -1.8
LINC02028-223	ENST00000625668	OCIAD2	Q56VL3	154 aa		3.81	□□□□□ -1.8
LINC02028-223	ENST00000625668	IGFL1	Q6UW32	110 aa		3.81	□□□□□ -1.8
LINC02028-223	ENST00000625668	SNHG12	Q9BXW3	62 aa		3.81	□□□□□ -1.8
LINC02028-223	ENST00000625668	DNAL4	O96015	105 aa		3.8	□□□□□ -1.8
LINC02028-223	ENST00000625668	FABP2	P12104	132 aa		3.8	□□□□□ -1.8
LINC02028-223	ENST00000625668	BATF	Q16520	125 aa		3.8	□□□□□ -1.8
LINC02028-223	ENST00000625668		Q6JHZ5	121 aa		3.8	□□□□□ -1.8
LINC02028-223	ENST00000625668	LST1	O00453	97 aa		3.79	□□□□□ -1.8

Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms