RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 NDUFV3P56181 108 aaKnown RBP7.17□□□□□ -1.26
LINC00963-220ENST00000625171 HIGD2AQ9BW72 106 aa7.17□□□□□ -1.26
LINC00963-220ENST00000625171 PDE6GP18545 87 aa7.16□□□□□ -1.26
LINC00963-220ENST00000625171 ZNF706Q9Y5V0 76 aaPredicted RBP7.15□□□□□ -1.26
LINC00963-220ENST00000625171 IGLV8-61A0A075B6I0 122 aa7.14□□□□□ -1.27
LINC00963-220ENST00000625171 J3QR89 54 aa7.14□□□□□ -1.27
LINC00963-220ENST00000625171 RBM3P98179 157 aaKnown RBP7.14□□□□□ -1.27
LINC00963-220ENST00000625171 LINC00483Q53H64 154 aa7.14□□□□□ -1.27
LINC00963-220ENST00000625171 SMIM29Q86T20 159 aa7.14□□□□□ -1.27
LINC00963-220ENST00000625171 ST20-AS1Q8NBB2 130 aa7.14□□□□□ -1.27
LINC00963-220ENST00000625171 LOC110117498A0A087WWA1 95 aa7.13□□□□□ -1.27
LINC00963-220ENST00000625171 K7ERU9 68 aa7.13□□□□□ -1.27
LINC00963-220ENST00000625171 LAMTOR3Q9UHA4 124 aa7.13□□□□□ -1.27
LINC00963-220ENST00000625171 MYCBP2O75592 4640 aa7.13□□□□□ -1.27
LINC00963-220ENST00000625171 TRBV7-4A0A0J9YYF1 115 aa7.12□□□□□ -1.27
LINC00963-220ENST00000625171 SPRR4Q96PI1 79 aa7.12□□□□□ -1.27
LINC00963-220ENST00000625171 DEFB105AQ8NG35 78 aa7.11□□□□□ -1.27
LINC00963-220ENST00000625171 FAT1Q14517 4588 aa7.11□□□□□ -1.27
LINC00963-220ENST00000625171 FAM240AA0A1B0GVK7 77 aa7.1□□□□□ -1.27
LINC00963-220ENST00000625171 A0A1B0GW54 56 aa7.1□□□□□ -1.27
LINC00963-220ENST00000625171 RPL37AP61513 92 aaKnown RBP7.1□□□□□ -1.27
LINC00963-220ENST00000625171 SRRM2Q9UQ35 2752 aaKnown RBP7.1□□□□□ -1.27
LINC00963-220ENST00000625171 ACYP1P07311 99 aa7.09□□□□□ -1.27
LINC00963-220ENST00000625171 DSCR8Q96T75 97 aa7.09□□□□□ -1.27
LINC00963-220ENST00000625171 CCKP06307 115 aa7.08□□□□□ -1.28
LINC00963-220ENST00000625171 KRTAP10-4P60372 401 aaPredicted RBP7.08□□□□□ -1.28
LINC00963-220ENST00000625171 HAMPP81172 84 aa7.08□□□□□ -1.28
LINC00963-220ENST00000625171 GAGE2AQ6NT46 116 aa7.08□□□□□ -1.28
LINC00963-220ENST00000625171 SPINK6Q6UWN8 80 aa7.08□□□□□ -1.28
LINC00963-220ENST00000625171 Q6JHZ5 121 aa7.07□□□□□ -1.28
LINC00963-220ENST00000625171 Q6ZQT0 140 aa7.07□□□□□ -1.28
LINC00963-220ENST00000625171 C14orf132Q9NPU4 83 aa7.07□□□□□ -1.28
LINC00963-220ENST00000625171 FAM229BQ4G0N7 80 aa7.06□□□□□ -1.28
LINC00963-220ENST00000625171 F8WEM9 126 aa7.05□□□□□ -1.28
LINC00963-220ENST00000625171 Q5VSD8 79 aa7.05□□□□□ -1.28
LINC00963-220ENST00000625171 FLG2Q5D862 2391 aaPredicted RBP7.04□□□□□ -1.28
LINC00963-220ENST00000625171 Q6Q795 121 aa7.04□□□□□ -1.28
LINC00963-220ENST00000625171 C3orf22Q8N5N4 141 aa7.04□□□□□ -1.28
LINC00963-220ENST00000625171 PLA2G1BP04054 148 aaKnown RBP7.03□□□□□ -1.28
LINC00963-220ENST00000625171 VPS13BQ7Z7G8 4022 aa7.02□□□□□ -1.29
LINC00963-220ENST00000625171 FAM229AH3BQW9 127 aa7.02□□□□□ -1.29
LINC00963-220ENST00000625171 SMR3BP02814 79 aaPredicted RBP7.02□□□□□ -1.29
LINC00963-220ENST00000625171 SSBP3-AS1Q7Z2R9 100 aa7.02□□□□□ -1.29
LINC00963-220ENST00000625171 KRTAP1-4P0C5Y4 121 aa7.01□□□□□ -1.29
LINC00963-220ENST00000625171 CRYGAP11844 174 aa7□□□□□ -1.29
LINC00963-220ENST00000625171 Q8NBF4 154 aa7□□□□□ -1.29
LINC00963-220ENST00000625171 UBR4Q5T4S7 5183 aa6.99□□□□□ -1.29
LINC00963-220ENST00000625171 J3QL48 77 aa6.99□□□□□ -1.29
LINC00963-220ENST00000625171 IGFL1Q6UW32 110 aa6.99□□□□□ -1.29
LINC00963-220ENST00000625171 A0A1W2PNM2 257 aa6.98□□□□□ -1.29
LINC00963-220ENST00000625171 TRBV7-7A0A0K0K1E9 115 aa6.96□□□□□ -1.3
LINC00963-220ENST00000625171 CD164Q04900 197 aa6.96□□□□□ -1.3
LINC00963-220ENST00000625171 CDIP1Q9H305 208 aa6.96□□□□□ -1.3
LINC00963-220ENST00000625171 LINC00846Q9NV44 126 aa6.96□□□□□ -1.3
LINC00963-220ENST00000625171 A0A1B0GV72 72 aa6.95□□□□□ -1.3
LINC00963-220ENST00000625171 ANAPC11Q9NYG5 84 aa6.94□□□□□ -1.3
LINC00963-220ENST00000625171 A0A087X002 238 aa6.93□□□□□ -1.3
LINC00963-220ENST00000625171 IGLV9-49A0A0B4J1Y8 123 aa6.93□□□□□ -1.3
LINC00963-220ENST00000625171 LINC00643Q86TS7 51 aa6.93□□□□□ -1.3
LINC00963-220ENST00000625171 HMCN2Q8NDA2 5059 aa6.92□□□□□ -1.3
LINC00963-220ENST00000625171 KRTAP29-1A8MX34 341 aaPredicted RBP6.92□□□□□ -1.3
LINC00963-220ENST00000625171 MOBPQ13875 183 aa6.92□□□□□ -1.3
LINC00963-220ENST00000625171 KRTAP13-2Q52LG2 175 aa6.92□□□□□ -1.3
LINC00963-220ENST00000625171 C9orf153Q5TBE3 101 aa6.92□□□□□ -1.3
LINC00963-220ENST00000625171 UBL5Q9BZL1 73 aa6.92□□□□□ -1.3
LINC00963-220ENST00000625171 Q5XG85 94 aa6.9□□□□□ -1.3
LINC00963-220ENST00000625171 VPS25Q9BRG1 176 aa6.9□□□□□ -1.3
LINC00963-220ENST00000625171 ATP5EP2Q5VTU8 51 aa6.89□□□□□ -1.31
LINC00963-220ENST00000625171 Q6ZVQ6 151 aa6.88□□□□□ -1.31
LINC00963-220ENST00000625171 A0A0G2JQZ4 141 aa6.87□□□□□ -1.31
LINC00963-220ENST00000625171 RPS29P62273 56 aaKnown RBP6.87□□□□□ -1.31
LINC00963-220ENST00000625171 NREPQ16612 68 aa6.87□□□□□ -1.31
LINC00963-220ENST00000625171 ASB16-AS1Q495Z4 193 aa6.87□□□□□ -1.31
LINC00963-220ENST00000625171 CXCL6P80162 114 aa6.86□□□□□ -1.31
LINC00963-220ENST00000625171 SPAG11AQ6PDA7 123 aa6.86□□□□□ -1.31
LINC00963-220ENST00000625171 TYMSOSQ8TAI1 123 aa6.86□□□□□ -1.31
LINC00963-220ENST00000625171 IMUPQ9GZP8 106 aa6.86□□□□□ -1.31
LINC00963-220ENST00000625171 SS18L2Q9UHA2 77 aa6.86□□□□□ -1.31
LINC00963-220ENST00000625171 A0A087WSZ3 146 aa6.85□□□□□ -1.31
LINC00963-220ENST00000625171 SIGMAR1Q99720 223 aa6.85□□□□□ -1.31
LINC00963-220ENST00000625171 SPINK1P00995 79 aa6.84□□□□□ -1.31
LINC00963-220ENST00000625171 PRR26Q8N8Z3 221 aa6.83□□□□□ -1.32
LINC00963-220ENST00000625171 LINC00472Q9H8W2 130 aa6.83□□□□□ -1.32
LINC00963-220ENST00000625171 PKHD1L1Q86WI1 4243 aa6.83□□□□□ -1.32
LINC00963-220ENST00000625171 LRP1Q07954 4544 aaKnown RBP6.82□□□□□ -1.32
LINC00963-220ENST00000625171 KRTAP10-8P60410 259 aa6.82□□□□□ -1.32
LINC00963-220ENST00000625171 J3KT08 172 aa6.81□□□□□ -1.32
LINC00963-220ENST00000625171 OXTP01178 125 aa6.81□□□□□ -1.32
LINC00963-220ENST00000625171 MT-ATP8P03928 68 aa6.8□□□□□ -1.32
LINC00963-220ENST00000625171 C4orf48Q5BLP8 95 aa6.8□□□□□ -1.32
LINC00963-220ENST00000625171 BPY2O14599 106 aa6.79□□□□□ -1.32
LINC00963-220ENST00000625171 LIMD2Q9BT23 127 aa6.79□□□□□ -1.32
LINC00963-220ENST00000625171 LINC00304Q8N9R0 145 aa6.78□□□□□ -1.32
LINC00963-220ENST00000625171 Q96NJ1 140 aa6.78□□□□□ -1.32
LINC00963-220ENST00000625171 HRCT1Q6UXD1 115 aa6.76□□□□□ -1.33
LINC00963-220ENST00000625171 FAT3Q8TDW7 4589 aa6.76□□□□□ -1.33
LINC00963-220ENST00000625171 DSCR10P59022 87 aa6.75□□□□□ -1.33
LINC00963-220ENST00000625171 IGKV3D-7A0A0C4DH55 119 aa6.74□□□□□ -1.33
LINC00963-220ENST00000625171 SCGB1A1P11684 91 aa6.73□□□□□ -1.33
LINC00963-220ENST00000625171 A8MWP4 228 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms