RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 Q5VSD8 79 aa1.07□□□□□ -2.24
CPNE3-213ENST00000622183 WFDC13Q8IUB5 93 aa1.07□□□□□ -2.24
CPNE3-213ENST00000622183 K7EIM0 57 aa1.06□□□□□ -2.24
CPNE3-213ENST00000622183 WT1-ASQ06250 92 aa1.06□□□□□ -2.24
CPNE3-213ENST00000622183 DEFB109BQ30KR1 87 aa1.06□□□□□ -2.24
CPNE3-213ENST00000622183 C10orf95Q9H7T3 257 aa1.06□□□□□ -2.24
CPNE3-213ENST00000622183 PTPRZ1P23471 2315 aaPredicted RBP1.06□□□□□ -2.24
CPNE3-213ENST00000622183 CLPSL2Q6UWE3 100 aa1.05□□□□□ -2.24
CPNE3-213ENST00000622183 DEFB106AQ8N104 65 aa1.05□□□□□ -2.24
CPNE3-213ENST00000622183 PCNX1Q96RV3 2341 aa1.05□□□□□ -2.24
CPNE3-213ENST00000622183 ZDBF2Q9HCK1 2354 aa1.05□□□□□ -2.24
CPNE3-213ENST00000622183 DEFB130BP0DP73 79 aa1.04□□□□□ -2.24
CPNE3-213ENST00000622183 DEFB130AP0DP74 79 aa1.04□□□□□ -2.24
CPNE3-213ENST00000622183 WFDC10BQ8IUB3 73 aa1.04□□□□□ -2.24
CPNE3-213ENST00000622183 LEAP2Q969E1 77 aa1.04□□□□□ -2.24
CPNE3-213ENST00000622183 A0A0C4DFX4 3053 aa1.04□□□□□ -2.24
CPNE3-213ENST00000622183 JMJD1CQ15652 2540 aa1.03□□□□□ -2.24
CPNE3-213ENST00000622183 H3BUA1 57 aa1.03□□□□□ -2.24
CPNE3-213ENST00000622183 LELP1Q5T871 98 aa1.03□□□□□ -2.24
CPNE3-213ENST00000622183 KAAG1Q9UBP8 84 aa1.03□□□□□ -2.24
CPNE3-213ENST00000622183 SPRR1AP35321 89 aa1.02□□□□□ -2.25
CPNE3-213ENST00000622183 WNK2Q9Y3S1 2297 aa1.01□□□□□ -2.25
CPNE3-213ENST00000622183 ZNF462Q96JM2 2506 aa1.01□□□□□ -2.25
CPNE3-213ENST00000622183 SPRR1BP22528 89 aa1□□□□□ -2.25
CPNE3-213ENST00000622183 NOTCH1P46531 2555 aa1□□□□□ -2.25
CPNE3-213ENST00000622183 PKDREJQ9NTG1 2253 aa0.99□□□□□ -2.25
CPNE3-213ENST00000622183 A8MTW9 85 aa0.99□□□□□ -2.25
CPNE3-213ENST00000622183 RPL39P5Q59GN2 51 aa0.99□□□□□ -2.25
CPNE3-213ENST00000622183 WNK1Q9H4A3 2382 aa0.98□□□□□ -2.25
CPNE3-213ENST00000622183 CSPG4Q6UVK1 2322 aa0.98□□□□□ -2.25
CPNE3-213ENST00000622183 DEFB105AQ8NG35 78 aa0.97□□□□□ -2.25
CPNE3-213ENST00000622183 S4R3F8 94 aa0.97□□□□□ -2.25
CPNE3-213ENST00000622183 TENM2Q9NT68 2774 aa0.96□□□□□ -2.25
CPNE3-213ENST00000622183 A0A0D9SG42 100 aa0.96□□□□□ -2.26
CPNE3-213ENST00000622183 TOMM7Q9P0U1 55 aa0.96□□□□□ -2.26
CPNE3-213ENST00000622183 CHD7Q9P2D1 2997 aa0.96□□□□□ -2.26
CPNE3-213ENST00000622183 FBN2P35556 2912 aa0.95□□□□□ -2.26
CPNE3-213ENST00000622183 AKAP6Q13023 2319 aa0.95□□□□□ -2.26
CPNE3-213ENST00000622183 REV3LO60673 3130 aa0.95□□□□□ -2.26
CPNE3-213ENST00000622183 SPTBN1Q01082 2364 aaKnown RBP0.95□□□□□ -2.26
CPNE3-213ENST00000622183 PRO0255Q9UI72 69 aa0.95□□□□□ -2.26
CPNE3-213ENST00000622183 MEGF8Q7Z7M0 2845 aa0.95□□□□□ -2.26
CPNE3-213ENST00000622183 OTOGQ6ZRI0 2925 aa0.95□□□□□ -2.26
CPNE3-213ENST00000622183 C2CD3Q4AC94 2353 aa0.94□□□□□ -2.26
CPNE3-213ENST00000622183 DSPP15924 2871 aaKnown RBP0.94□□□□□ -2.26
CPNE3-213ENST00000622183 NOP10Q9NPE3 64 aaKnown RBP0.94□□□□□ -2.26
CPNE3-213ENST00000622183 F8P00451 2351 aa0.93□□□□□ -2.26
CPNE3-213ENST00000622183 ACACAQ13085 2346 aa0.93□□□□□ -2.26
CPNE3-213ENST00000622183 DEFB108AA8MXU0 73 aa0.93□□□□□ -2.26
CPNE3-213ENST00000622183 KRTAP19-3Q7Z4W3 81 aa0.93□□□□□ -2.26
CPNE3-213ENST00000622183 APLNQ9ULZ1 77 aa0.93□□□□□ -2.26
CPNE3-213ENST00000622183 VPS13DQ5THJ4 4388 aa0.93□□□□□ -2.26
CPNE3-213ENST00000622183 VWFP04275 2813 aa0.92□□□□□ -2.26
CPNE3-213ENST00000622183 PRRC2CQ9Y520 2896 aaKnown RBP0.91□□□□□ -2.26
CPNE3-213ENST00000622183 SPTBN2O15020 2390 aa0.91□□□□□ -2.26
CPNE3-213ENST00000622183 SPTBN4Q9H254 2564 aa0.91□□□□□ -2.26
CPNE3-213ENST00000622183 MGAQ8IWI9 3026 aa0.91□□□□□ -2.26
CPNE3-213ENST00000622183 PRLHP81277 87 aa0.91□□□□□ -2.26
CPNE3-213ENST00000622183 COX14Q96I36 57 aa0.91□□□□□ -2.26
CPNE3-213ENST00000622183 UBR5O95071 2799 aaPredicted RBP0.91□□□□□ -2.26
CPNE3-213ENST00000622183 SPTA1P02549 2419 aa0.91□□□□□ -2.26
CPNE3-213ENST00000622183 DEFB104AQ8WTQ1 72 aa0.9□□□□□ -2.27
CPNE3-213ENST00000622183 ZNF469Q96JG9 3925 aaPredicted RBP0.9□□□□□ -2.27
CPNE3-213ENST00000622183 DNAH11Q96DT5 4516 aa0.9□□□□□ -2.27
CPNE3-213ENST00000622183 ASH1LQ9NR48 2969 aaKnown RBP0.9□□□□□ -2.27
CPNE3-213ENST00000622183 H3BUX3 64 aa0.89□□□□□ -2.27
CPNE3-213ENST00000622183 ABCA2Q9BZC7 2435 aa0.88□□□□□ -2.27
CPNE3-213ENST00000622183 NBPF19A0A087WUL8 3843 aa0.88□□□□□ -2.27
CPNE3-213ENST00000622183 KRTAP5-10Q6L8G5 202 aa0.88□□□□□ -2.27
CPNE3-213ENST00000622183 CEP290O15078 2479 aa0.88□□□□□ -2.27
CPNE3-213ENST00000622183 H0YGG7 62 aa0.87□□□□□ -2.27
CPNE3-213ENST00000622183 M0QZ58 72 aa0.87□□□□□ -2.27
CPNE3-213ENST00000622183 TRANK1O15050 2925 aa0.87□□□□□ -2.27
CPNE3-213ENST00000622183 CACNA1HO95180 2353 aa0.86□□□□□ -2.27
CPNE3-213ENST00000622183 CELSR2Q9HCU4 2923 aa0.86□□□□□ -2.27
CPNE3-213ENST00000622183 GVINP1Q7Z2Y8 2422 aa0.86□□□□□ -2.27
CPNE3-213ENST00000622183 SETD2Q9BYW2 2564 aaPredicted RBP0.86□□□□□ -2.27
CPNE3-213ENST00000622183 COL6A5A8TX70 2615 aa0.85□□□□□ -2.27
CPNE3-213ENST00000622183 TNRC18O15417 2968 aaPredicted RBP0.85□□□□□ -2.27
CPNE3-213ENST00000622183 SACSQ9NZJ4 4579 aa0.85□□□□□ -2.27
CPNE3-213ENST00000622183 AKAP9Q99996 3911 aa0.85□□□□□ -2.27
CPNE3-213ENST00000622183 NAV2Q8IVL1 2488 aa0.84□□□□□ -2.27
CPNE3-213ENST00000622183 ABCA12Q86UK0 2595 aa0.84□□□□□ -2.27
CPNE3-213ENST00000622183 PRKDCP78527 4128 aaKnown RBP0.84□□□□□ -2.27
CPNE3-213ENST00000622183 VPS13BQ7Z7G8 4022 aa0.84□□□□□ -2.28
CPNE3-213ENST00000622183 EP300Q09472 2414 aaPredicted RBP0.84□□□□□ -2.28
CPNE3-213ENST00000622183 MYCBP2O75592 4640 aa0.83□□□□□ -2.28
CPNE3-213ENST00000622183 SPINK1P00995 79 aa0.83□□□□□ -2.28
CPNE3-213ENST00000622183 CHD6Q8TD26 2715 aa0.83□□□□□ -2.28
CPNE3-213ENST00000622183 CELSR1Q9NYQ6 3014 aa0.83□□□□□ -2.28
CPNE3-213ENST00000622183 CCDC168Q8NDH2 2452 aa0.82□□□□□ -2.28
CPNE3-213ENST00000622183 ZNF292O60281 2723 aa0.82□□□□□ -2.28
CPNE3-213ENST00000622183 APC2O95996 2303 aa0.82□□□□□ -2.28
CPNE3-213ENST00000622183 SRRM2Q9UQ35 2752 aaKnown RBP0.82□□□□□ -2.28
CPNE3-213ENST00000622183 STATHP02808 62 aa0.82□□□□□ -2.28
CPNE3-213ENST00000622183 RHPN1-AS1Q9BWJ2 59 aa0.82□□□□□ -2.28
CPNE3-213ENST00000622183 PKD1L2Q7Z442 2459 aa0.82□□□□□ -2.28
CPNE3-213ENST00000622183 TTC28Q96AY4 2481 aa0.81□□□□□ -2.28
CPNE3-213ENST00000622183 KRTAP2-3P0C7H8 128 aa0.81□□□□□ -2.28
CPNE3-213ENST00000622183 APELAP0DMC3 54 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms