RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 TNP2Q05952 138 aa4.84□□□□□ -1.63
TRIM49B-202ENST00000622138 NSD1Q96L73 2696 aaPredicted RBP4.84□□□□□ -1.64
TRIM49B-202ENST00000622138 IGLV7-46A0A075B6I9 117 aa4.84□□□□□ -1.64
TRIM49B-202ENST00000622138 CYSRT1A8MQ03 144 aa4.84□□□□□ -1.64
TRIM49B-202ENST00000622138 C1orf137Q5JT78 98 aa4.84□□□□□ -1.64
TRIM49B-202ENST00000622138 Q8N377 158 aa4.84□□□□□ -1.64
TRIM49B-202ENST00000622138 ATRQ13535 2644 aa4.83□□□□□ -1.64
TRIM49B-202ENST00000622138 SERTAD4-AS1Q5TG53 156 aa4.82□□□□□ -1.64
TRIM49B-202ENST00000622138 FLNBO75369 2602 aaKnown RBP4.82□□□□□ -1.64
TRIM49B-202ENST00000622138 PRAC1Q96KF2 57 aa4.82□□□□□ -1.64
TRIM49B-202ENST00000622138 C6orf48Q9UBA6 75 aa4.82□□□□□ -1.64
TRIM49B-202ENST00000622138 SPINK7P58062 85 aa4.81□□□□□ -1.64
TRIM49B-202ENST00000622138 LELP1Q5T871 98 aa4.81□□□□□ -1.64
TRIM49B-202ENST00000622138 XAGE1AQ9HD64 81 aa4.81□□□□□ -1.64
TRIM49B-202ENST00000622138 PRR34Q9NV39 138 aa4.81□□□□□ -1.64
TRIM49B-202ENST00000622138 KRTAP29-1A8MX34 341 aaPredicted RBP4.81□□□□□ -1.64
TRIM49B-202ENST00000622138 PKD1L1Q8TDX9 2849 aa4.8□□□□□ -1.64
TRIM49B-202ENST00000622138 WFDC13Q8IUB5 93 aa4.8□□□□□ -1.64
TRIM49B-202ENST00000622138 DHRS4-AS1Q9P1J3 65 aa4.8□□□□□ -1.64
TRIM49B-202ENST00000622138 TEP1Q99973 2627 aaKnown RBP4.79□□□□□ -1.64
TRIM49B-202ENST00000622138 INAFM1C9JVW0 142 aa4.79□□□□□ -1.64
TRIM49B-202ENST00000622138 SPART-AS1P0CW21 52 aa4.78□□□□□ -1.64
TRIM49B-202ENST00000622138 WFDC10BQ8IUB3 73 aa4.78□□□□□ -1.64
TRIM49B-202ENST00000622138 TENM3Q9P273 2699 aa4.78□□□□□ -1.64
TRIM49B-202ENST00000622138 SPAG11AQ6PDA7 123 aa4.78□□□□□ -1.64
TRIM49B-202ENST00000622138 DEFB105AQ8NG35 78 aa4.78□□□□□ -1.64
TRIM49B-202ENST00000622138 EGFEM1PQ0D2K5 195 aa4.77□□□□□ -1.65
TRIM49B-202ENST00000622138 KRTAP26-1Q6PEX3 210 aa4.77□□□□□ -1.65
TRIM49B-202ENST00000622138 J3QKU1 62 aa4.77□□□□□ -1.65
TRIM49B-202ENST00000622138 C7orf33Q8WU49 177 aa4.77□□□□□ -1.65
TRIM49B-202ENST00000622138 RTL8CO15255 209 aa4.75□□□□□ -1.65
TRIM49B-202ENST00000622138 C15orf56Q8N910 161 aa4.75□□□□□ -1.65
TRIM49B-202ENST00000622138 IGLV5-37A0A075B6J1 123 aa4.75□□□□□ -1.65
TRIM49B-202ENST00000622138 Q6ZRX8 168 aa4.74□□□□□ -1.65
TRIM49B-202ENST00000622138 ADM2Q7Z4H4 148 aa4.74□□□□□ -1.65
TRIM49B-202ENST00000622138 CAMK2N2Q96S95 79 aa4.74□□□□□ -1.65
TRIM49B-202ENST00000622138 RETNLBQ9BQ08 111 aa4.74□□□□□ -1.65
TRIM49B-202ENST00000622138 ANK2Q01484 3957 aa4.73□□□□□ -1.65
TRIM49B-202ENST00000622138 CMYA5Q8N3K9 4069 aa4.73□□□□□ -1.65
TRIM49B-202ENST00000622138 DEFB116Q30KQ4 102 aa4.73□□□□□ -1.65
TRIM49B-202ENST00000622138 IGLV1-50A0A075B6I6 118 aa4.72□□□□□ -1.65
TRIM49B-202ENST00000622138 H0Y9J4 135 aa4.72□□□□□ -1.65
TRIM49B-202ENST00000622138 KRTAP10-11P60412 298 aa4.71□□□□□ -1.65
TRIM49B-202ENST00000622138 LINC00476Q8WZB0 136 aa4.71□□□□□ -1.65
TRIM49B-202ENST00000622138 DEFB131BA0A096LNP1 70 aa4.7□□□□□ -1.66
TRIM49B-202ENST00000622138 KRTAP4-16G5E9R7 235 aaPredicted RBP4.7□□□□□ -1.66
TRIM49B-202ENST00000622138 DNAH1Q9P2D7 4330 aa4.7□□□□□ -1.66
TRIM49B-202ENST00000622138 HRES1P13985 223 aa4.7□□□□□ -1.66
TRIM49B-202ENST00000622138 SPRR1AP35321 89 aa4.7□□□□□ -1.66
TRIM49B-202ENST00000622138 A8MWP4 228 aa4.69□□□□□ -1.66
TRIM49B-202ENST00000622138 DNAH3Q8TD57 4116 aa4.69□□□□□ -1.66
TRIM49B-202ENST00000622138 IGLV8-61A0A075B6I0 122 aa4.68□□□□□ -1.66
TRIM49B-202ENST00000622138 TP53AIP1Q9HCN2 124 aa4.68□□□□□ -1.66
TRIM49B-202ENST00000622138 PLA2G2DQ9UNK4 145 aa4.68□□□□□ -1.66
TRIM49B-202ENST00000622138 H3BNG1 76 aa4.68□□□□□ -1.66
TRIM49B-202ENST00000622138 PCOTHQ58A44 107 aa4.68□□□□□ -1.66
TRIM49B-202ENST00000622138 IGFL1Q6UW32 110 aa4.68□□□□□ -1.66
TRIM49B-202ENST00000622138 CASC10Q5T4H9 136 aa4.67□□□□□ -1.66
TRIM49B-202ENST00000622138 SPATA8Q6RVD6 105 aa4.67□□□□□ -1.66
TRIM49B-202ENST00000622138 BAHCC1Q9P281 2608 aa4.67□□□□□ -1.66
TRIM49B-202ENST00000622138 STAB1Q9NY15 2570 aa4.67□□□□□ -1.66
TRIM49B-202ENST00000622138 A0A087WSZ3 146 aa4.67□□□□□ -1.66
TRIM49B-202ENST00000622138 RPL37AP61513 92 aaKnown RBP4.67□□□□□ -1.66
TRIM49B-202ENST00000622138 LINC01556Q5JQF7 62 aa4.67□□□□□ -1.66
TRIM49B-202ENST00000622138 XP32Q5T750 250 aa4.67□□□□□ -1.66
TRIM49B-202ENST00000622138 Q6ZR54 194 aa4.67□□□□□ -1.66
TRIM49B-202ENST00000622138 MAST4O15021 2626 aa4.66□□□□□ -1.66
TRIM49B-202ENST00000622138 FAM168BA1KXE4 195 aa4.66□□□□□ -1.66
TRIM49B-202ENST00000622138 MMP24-AS1A0A0U1RRL7 71 aa4.65□□□□□ -1.66
TRIM49B-202ENST00000622138 NOTCH1P46531 2555 aa4.65□□□□□ -1.66
TRIM49B-202ENST00000622138 CSAG1Q6PB30 78 aa4.65□□□□□ -1.67
TRIM49B-202ENST00000622138 KRTAP7-1Q8IUC3 87 aa4.65□□□□□ -1.67
TRIM49B-202ENST00000622138 RPL37AP8A6NKH3 93 aa4.64□□□□□ -1.67
TRIM49B-202ENST00000622138 ZNF706Q9Y5V0 76 aaPredicted RBP4.64□□□□□ -1.67
TRIM49B-202ENST00000622138 FBN1P35555 2871 aaKnown RBP4.64□□□□□ -1.67
TRIM49B-202ENST00000622138 IGKV2-24A0A0C4DH68 120 aa4.64□□□□□ -1.67
TRIM49B-202ENST00000622138 F8P00451 2351 aa4.63□□□□□ -1.67
TRIM49B-202ENST00000622138 DNAH10Q8IVF4 4471 aa4.63□□□□□ -1.67
TRIM49B-202ENST00000622138 TLX1NBP0CAT3 122 aa4.63□□□□□ -1.67
TRIM49B-202ENST00000622138 DNAH10OSP0CZ25 163 aa4.63□□□□□ -1.67
TRIM49B-202ENST00000622138 LINC00472Q9H8W2 130 aa4.63□□□□□ -1.67
TRIM49B-202ENST00000622138 HUWE1Q7Z6Z7 4374 aaKnown RBP4.62□□□□□ -1.67
TRIM49B-202ENST00000622138 C1orf134Q5TEV5 83 aa4.61□□□□□ -1.67
TRIM49B-202ENST00000622138 KRTAP4-8Q9BYQ9 185 aa4.61□□□□□ -1.67
TRIM49B-202ENST00000622138 MIR22HGQ0VDD5 57 aa4.6□□□□□ -1.67
TRIM49B-202ENST00000622138 ALMS1Q8TCU4 4167 aa4.6□□□□□ -1.67
TRIM49B-202ENST00000622138 KRTAP24-1Q3LI83 254 aa4.6□□□□□ -1.67
TRIM49B-202ENST00000622138 NBEAL1Q6ZS30 2694 aa4.59□□□□□ -1.67
TRIM49B-202ENST00000622138 A0A1B0GU69 56 aa4.59□□□□□ -1.67
TRIM49B-202ENST00000622138 UQCR11O14957 56 aa4.59□□□□□ -1.67
TRIM49B-202ENST00000622138 IGHV6-1A0A0B4J1U7 121 aa4.58□□□□□ -1.68
TRIM49B-202ENST00000622138 A0A0G2JQZ4 141 aa4.58□□□□□ -1.68
TRIM49B-202ENST00000622138 A0A1W2PNN7 141 aa4.58□□□□□ -1.68
TRIM49B-202ENST00000622138 ACYP2P14621 99 aa4.58□□□□□ -1.68
TRIM49B-202ENST00000622138 ROMO1P60602 79 aa4.57□□□□□ -1.68
TRIM49B-202ENST00000622138 REG3GQ6UW15 175 aa4.57□□□□□ -1.68
TRIM49B-202ENST00000622138 LYSTQ99698 3801 aa4.57□□□□□ -1.68
TRIM49B-202ENST00000622138 DNAH9Q9NYC9 4486 aa4.56□□□□□ -1.68
TRIM49B-202ENST00000622138 COL6A5A8TX70 2615 aa4.56□□□□□ -1.68
TRIM49B-202ENST00000622138 ZNF861PO60384 105 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms