RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 Q6ZSA8 131 aa1.17□□□□□ -2.22
BRCA1-229ENST00000621897 LEAP2Q969E1 77 aa1.17□□□□□ -2.22
BRCA1-229ENST00000621897 CACNA1HO95180 2353 aa1.16□□□□□ -2.22
BRCA1-229ENST00000621897 RPL39P5Q59GN2 51 aa1.16□□□□□ -2.22
BRCA1-229ENST00000621897 LELP1Q5T871 98 aa1.16□□□□□ -2.22
BRCA1-229ENST00000621897 RPL39LQ96EH5 51 aaKnown RBP1.16□□□□□ -2.22
BRCA1-229ENST00000621897 PKDREJQ9NTG1 2253 aa1.15□□□□□ -2.22
BRCA1-229ENST00000621897 H0YGG7 62 aa1.15□□□□□ -2.23
BRCA1-229ENST00000621897 NDUFA1O15239 70 aa1.15□□□□□ -2.23
BRCA1-229ENST00000621897 RPL39P62891 51 aaKnown RBP1.15□□□□□ -2.23
BRCA1-229ENST00000621897 DEFB105AQ8NG35 78 aa1.15□□□□□ -2.23
BRCA1-229ENST00000621897 C6orf48Q9UBA6 75 aa1.15□□□□□ -2.23
BRCA1-229ENST00000621897 WNK2Q9Y3S1 2297 aa1.14□□□□□ -2.23
BRCA1-229ENST00000621897 H1FX-AS1Q4G0G2 97 aa1.14□□□□□ -2.23
BRCA1-229ENST00000621897 DEFB104AQ8WTQ1 72 aa1.14□□□□□ -2.23
BRCA1-229ENST00000621897 SPTBN1Q01082 2364 aaKnown RBP1.14□□□□□ -2.23
BRCA1-229ENST00000621897 SPRR1BP22528 89 aa1.13□□□□□ -2.23
BRCA1-229ENST00000621897 DEFB110Q30KQ9 67 aa1.13□□□□□ -2.23
BRCA1-229ENST00000621897 TMEM167AQ8TBQ9 72 aa1.13□□□□□ -2.23
BRCA1-229ENST00000621897 APLNQ9ULZ1 77 aa1.13□□□□□ -2.23
BRCA1-229ENST00000621897 TPRP12270 2363 aaKnown RBP1.13□□□□□ -2.23
BRCA1-229ENST00000621897 POLR2KP53803 58 aaKnown RBP1.12□□□□□ -2.23
BRCA1-229ENST00000621897 KRTAP10-4P60372 401 aaPredicted RBP1.12□□□□□ -2.23
BRCA1-229ENST00000621897 WT1-ASQ06250 92 aa1.12□□□□□ -2.23
BRCA1-229ENST00000621897 WFDC13Q8IUB5 93 aa1.12□□□□□ -2.23
BRCA1-229ENST00000621897 COX14Q96I36 57 aa1.12□□□□□ -2.23
BRCA1-229ENST00000621897 MEGF8Q7Z7M0 2845 aa1.12□□□□□ -2.23
BRCA1-229ENST00000621897 GVINP1Q7Z2Y8 2422 aa1.11□□□□□ -2.23
BRCA1-229ENST00000621897 EP400Q96L91 3159 aa1.11□□□□□ -2.23
BRCA1-229ENST00000621897 APELAP0DMC3 54 aa1.11□□□□□ -2.23
BRCA1-229ENST00000621897 CD52P31358 61 aa1.11□□□□□ -2.23
BRCA1-229ENST00000621897 IGF2RP11717 2491 aa1.11□□□□□ -2.23
BRCA1-229ENST00000621897 REV3LO60673 3130 aa1.11□□□□□ -2.23
BRCA1-229ENST00000621897 TOMM7Q9P0U1 55 aa1.1□□□□□ -2.23
BRCA1-229ENST00000621897 POLQO75417 2590 aa1.09□□□□□ -2.23
BRCA1-229ENST00000621897 ZNF292O60281 2723 aa1.09□□□□□ -2.23
BRCA1-229ENST00000621897 K7EIM0 57 aa1.09□□□□□ -2.23
BRCA1-229ENST00000621897 DEFB130BP0DP73 79 aa1.09□□□□□ -2.23
BRCA1-229ENST00000621897 DEFB130AP0DP74 79 aa1.09□□□□□ -2.23
BRCA1-229ENST00000621897 TTC28Q96AY4 2481 aa1.09□□□□□ -2.24
BRCA1-229ENST00000621897 M0QY20 66 aa1.08□□□□□ -2.24
BRCA1-229ENST00000621897 ABCA12Q86UK0 2595 aa1.07□□□□□ -2.24
BRCA1-229ENST00000621897 F8P00451 2351 aa1.07□□□□□ -2.24
BRCA1-229ENST00000621897 DEFB108BQ8NET1 73 aa1.07□□□□□ -2.24
BRCA1-229ENST00000621897 FAM186AA6NE01 2351 aa1.06□□□□□ -2.24
BRCA1-229ENST00000621897 DEFB1P60022 68 aa1.06□□□□□ -2.24
BRCA1-229ENST00000621897 KRTAP5-10Q6L8G5 202 aa1.06□□□□□ -2.24
BRCA1-229ENST00000621897 WFDC10BQ8IUB3 73 aa1.06□□□□□ -2.24
BRCA1-229ENST00000621897 CEP250Q9BV73 2442 aa1.06□□□□□ -2.24
BRCA1-229ENST00000621897 PCNX1Q96RV3 2341 aa1.05□□□□□ -2.24
BRCA1-229ENST00000621897 KLK9Q2XQG4 91 aa1.05□□□□□ -2.24
BRCA1-229ENST00000621897 DNAH12Q6ZR08 3092 aa1.05□□□□□ -2.24
BRCA1-229ENST00000621897 CSPG4Q6UVK1 2322 aa1.05□□□□□ -2.24
BRCA1-229ENST00000621897 DSPP15924 2871 aaKnown RBP1.05□□□□□ -2.24
BRCA1-229ENST00000621897 ABCA2Q9BZC7 2435 aa1.05□□□□□ -2.24
BRCA1-229ENST00000621897 A8MTW9 85 aa1.04□□□□□ -2.24
BRCA1-229ENST00000621897 HTN1P15515 57 aa1.04□□□□□ -2.24
BRCA1-229ENST00000621897 KAAG1Q9UBP8 84 aa1.04□□□□□ -2.24
BRCA1-229ENST00000621897 ANK2Q01484 3957 aa1.04□□□□□ -2.24
BRCA1-229ENST00000621897 MAP1BP46821 2468 aaKnown RBP1.04□□□□□ -2.24
BRCA1-229ENST00000621897 WNK1Q9H4A3 2382 aa1.03□□□□□ -2.24
BRCA1-229ENST00000621897 CREBBPQ92793 2442 aa1.03□□□□□ -2.24
BRCA1-229ENST00000621897 IGLV5-48A0A075B6I7 105 aa1.03□□□□□ -2.24
BRCA1-229ENST00000621897 H3BUA1 57 aa1.03□□□□□ -2.24
BRCA1-229ENST00000621897 Q9Y3F1 56 aa1.03□□□□□ -2.24
BRCA1-229ENST00000621897 NCOR1O75376 2440 aa1.03□□□□□ -2.25
BRCA1-229ENST00000621897 EP300Q09472 2414 aaPredicted RBP1.03□□□□□ -2.25
BRCA1-229ENST00000621897 CSMD3Q7Z407 3707 aa1.02□□□□□ -2.25
BRCA1-229ENST00000621897 TRANK1O15050 2925 aa1.02□□□□□ -2.25
BRCA1-229ENST00000621897 SPTA1P02549 2419 aa1.02□□□□□ -2.25
BRCA1-229ENST00000621897 GOLGB1Q14789 3259 aaKnown RBP1.02□□□□□ -2.25
BRCA1-229ENST00000621897 CHD9Q3L8U1 2897 aa1.02□□□□□ -2.25
BRCA1-229ENST00000621897 RHPN1-AS1Q9BWJ2 59 aa1.02□□□□□ -2.25
BRCA1-229ENST00000621897 HTTP42858 3142 aa1.02□□□□□ -2.25
BRCA1-229ENST00000621897 AKAP6Q13023 2319 aa1.01□□□□□ -2.25
BRCA1-229ENST00000621897 DEFB133Q30KQ1 61 aa1.01□□□□□ -2.25
BRCA1-229ENST00000621897 ACACAQ13085 2346 aa1□□□□□ -2.25
BRCA1-229ENST00000621897 PCNTO95613 3336 aa1□□□□□ -2.25
BRCA1-229ENST00000621897 CENPFP49454 3210 aa1□□□□□ -2.25
BRCA1-229ENST00000621897 CLPSL2Q6UWE3 100 aa1□□□□□ -2.25
BRCA1-229ENST00000621897 RIF1Q5UIP0 2472 aaKnown RBP1□□□□□ -2.25
BRCA1-229ENST00000621897 APC2O95996 2303 aa1□□□□□ -2.25
BRCA1-229ENST00000621897 CEP290O15078 2479 aa0.99□□□□□ -2.25
BRCA1-229ENST00000621897 C5orf42Q9H799 3197 aa0.99□□□□□ -2.25
BRCA1-229ENST00000621897 MMP24-AS1A0A0U1RRL7 71 aa0.99□□□□□ -2.25
BRCA1-229ENST00000621897 DEFB131AP59861 70 aa0.99□□□□□ -2.25
BRCA1-229ENST00000621897 S4R3F8 94 aa0.99□□□□□ -2.25
BRCA1-229ENST00000621897 CEP350Q5VT06 3117 aa0.99□□□□□ -2.25
BRCA1-229ENST00000621897 CELSR2Q9HCU4 2923 aa0.99□□□□□ -2.25
BRCA1-229ENST00000621897 CHD7Q9P2D1 2997 aa0.98□□□□□ -2.25
BRCA1-229ENST00000621897 NBASA2RRP1 2371 aa0.97□□□□□ -2.25
BRCA1-229ENST00000621897 BDP1A6H8Y1 2624 aa0.97□□□□□ -2.25
BRCA1-229ENST00000621897 NOP10Q9NPE3 64 aaKnown RBP0.97□□□□□ -2.25
BRCA1-229ENST00000621897 LAMA2P24043 3122 aaKnown RBP0.96□□□□□ -2.26
BRCA1-229ENST00000621897 ATRQ13535 2644 aa0.96□□□□□ -2.26
BRCA1-229ENST00000621897 PRKDCP78527 4128 aaKnown RBP0.96□□□□□ -2.26
BRCA1-229ENST00000621897 DEFB136Q30KP8 78 aa0.96□□□□□ -2.26
BRCA1-229ENST00000621897 DEFB109BQ30KR1 87 aa0.96□□□□□ -2.26
BRCA1-229ENST00000621897 PIEZO1Q92508 2521 aa0.96□□□□□ -2.26
BRCA1-229ENST00000621897 SRCAPQ6ZRS2 3230 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms