RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 C9orf116Q5BN46 136 aaPredicted RBP2.94□□□□□ -1.94
VPS29-212ENST00000621131 KRTAP26-1Q6PEX3 210 aa2.94□□□□□ -1.94
VPS29-212ENST00000621131 LINC00526Q96FQ7 95 aa2.94□□□□□ -1.94
VPS29-212ENST00000621131 DNAH11Q96DT5 4516 aa2.94□□□□□ -1.94
VPS29-212ENST00000621131 FAT2Q9NYQ8 4349 aa2.93□□□□□ -1.94
VPS29-212ENST00000621131 IGKV2-28A0A075B6P5 120 aa2.93□□□□□ -1.94
VPS29-212ENST00000621131 A0A1B0GX51 115 aa2.93□□□□□ -1.94
VPS29-212ENST00000621131 H3BQ85 93 aa2.93□□□□□ -1.94
VPS29-212ENST00000621131 H3BT86 120 aa2.93□□□□□ -1.94
VPS29-212ENST00000621131 M0QXV9 152 aa2.93□□□□□ -1.94
VPS29-212ENST00000621131 M0R378 163 aa2.93□□□□□ -1.94
VPS29-212ENST00000621131 IGKV2D-28P01615 120 aa2.93□□□□□ -1.94
VPS29-212ENST00000621131 TLX1NBP0CAT3 122 aa2.93□□□□□ -1.94
VPS29-212ENST00000621131 LINC00337Q8N6G1 96 aa2.93□□□□□ -1.94
VPS29-212ENST00000621131 SMIM11BQ8TCY0 68 aa2.93□□□□□ -1.94
VPS29-212ENST00000621131 TRAV23DV6A0A075B6W5 121 aa2.92□□□□□ -1.94
VPS29-212ENST00000621131 ANKRD29Q8N6D5 301 aa2.92□□□□□ -1.94
VPS29-212ENST00000621131 CLEC2BQ92478 149 aa2.92□□□□□ -1.94
VPS29-212ENST00000621131 DIRC1Q969H9 104 aa2.92□□□□□ -1.94
VPS29-212ENST00000621131 XAGE1AQ9HD64 81 aa2.92□□□□□ -1.94
VPS29-212ENST00000621131 LECT2O14960 151 aa2.91□□□□□ -1.94
VPS29-212ENST00000621131 CNBPP62633 177 aaKnown RBP2.91□□□□□ -1.94
VPS29-212ENST00000621131 OCIAD2Q56VL3 154 aa2.91□□□□□ -1.94
VPS29-212ENST00000621131 TEN1Q86WV5 123 aa2.91□□□□□ -1.94
VPS29-212ENST00000621131 MTURNQ8N3F0 131 aa2.91□□□□□ -1.94
VPS29-212ENST00000621131 PPDPFLQ8WWR9 84 aa2.91□□□□□ -1.94
VPS29-212ENST00000621131 ORMDL1Q9P0S3 153 aa2.91□□□□□ -1.94
VPS29-212ENST00000621131 LINC00474Q9P2X8 69 aa2.91□□□□□ -1.94
VPS29-212ENST00000621131 DNAH2Q9P225 4427 aa2.9□□□□□ -1.94
VPS29-212ENST00000621131 DNAH17Q9UFH2 4485 aa2.9□□□□□ -1.95
VPS29-212ENST00000621131 MYCBP2O75592 4640 aa2.9□□□□□ -1.95
VPS29-212ENST00000621131 TRBV7-6A0A0J9YX20 115 aa2.9□□□□□ -1.95
VPS29-212ENST00000621131 SPRR5A0A1B0GTR4 108 aa2.9□□□□□ -1.95
VPS29-212ENST00000621131 LY6G6CO95867 125 aa2.9□□□□□ -1.95
VPS29-212ENST00000621131 IGLV6-57P01721 117 aa2.9□□□□□ -1.95
VPS29-212ENST00000621131 INAFM2P0DMQ5 153 aa2.9□□□□□ -1.95
VPS29-212ENST00000621131 COX7BP24311 80 aa2.9□□□□□ -1.95
VPS29-212ENST00000621131 WFDC2Q14508 124 aa2.9□□□□□ -1.95
VPS29-212ENST00000621131 ETDBQ3ZM63 59 aa2.9□□□□□ -1.95
VPS29-212ENST00000621131 C6orf99Q4VX62 202 aa2.9□□□□□ -1.95
VPS29-212ENST00000621131 VPS25Q9BRG1 176 aa2.9□□□□□ -1.95
VPS29-212ENST00000621131 VPS13DQ5THJ4 4388 aa2.9□□□□□ -1.95
VPS29-212ENST00000621131 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.89□□□□□ -1.95
VPS29-212ENST00000621131 TRBV10-3A0A0K0K1G6 114 aa2.89□□□□□ -1.95
VPS29-212ENST00000621131 ETDCA0A1B0GVM5 59 aa2.89□□□□□ -1.95
VPS29-212ENST00000621131 hADV29S1A0JD25 119 aa2.89□□□□□ -1.95
VPS29-212ENST00000621131 C16orf90A8MZG2 172 aa2.89□□□□□ -1.95
VPS29-212ENST00000621131 TMEM256-PLSCR3K7ERE1 68 aa2.89□□□□□ -1.95
VPS29-212ENST00000621131 M0R2N4 97 aa2.89□□□□□ -1.95
VPS29-212ENST00000621131 ZNF73O43830 326 aaPredicted RBP2.89□□□□□ -1.95
VPS29-212ENST00000621131 BAALC-AS2P0C853 105 aa2.89□□□□□ -1.95
VPS29-212ENST00000621131 PRR3P79522 188 aaKnown RBP2.89□□□□□ -1.95
VPS29-212ENST00000621131 C1orf134Q5TEV5 83 aa2.89□□□□□ -1.95
VPS29-212ENST00000621131 JMJD7-PLA2G4BH0Y9G9 81 aa2.88□□□□□ -1.95
VPS29-212ENST00000621131 FAM19A5Q7Z5A7 132 aaPredicted RBP2.88□□□□□ -1.95
VPS29-212ENST00000621131 MRPL55Q7Z7F7 128 aaKnown RBP2.88□□□□□ -1.95
VPS29-212ENST00000621131 Q8N814 137 aa2.88□□□□□ -1.95
VPS29-212ENST00000621131 DPH3Q96FX2 82 aa2.88□□□□□ -1.95
VPS29-212ENST00000621131 LINC01600Q96MT4 127 aa2.88□□□□□ -1.95
VPS29-212ENST00000621131 IGKV2-24A0A0C4DH68 120 aa2.87□□□□□ -1.95
VPS29-212ENST00000621131 ACYP1P07311 99 aa2.87□□□□□ -1.95
VPS29-212ENST00000621131 ELOF1P60002 83 aaKnown RBP2.87□□□□□ -1.95
VPS29-212ENST00000621131 UBE2BP63146 152 aa2.87□□□□□ -1.95
VPS29-212ENST00000621131 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.87□□□□□ -1.95
VPS29-212ENST00000621131 LINC00575Q6W349 94 aa2.87□□□□□ -1.95
VPS29-212ENST00000621131 C9orf163Q8N9P6 203 aa2.87□□□□□ -1.95
VPS29-212ENST00000621131 C7orf33Q8WU49 177 aa2.87□□□□□ -1.95
VPS29-212ENST00000621131 KCNQ1DNQ9H478 68 aa2.87□□□□□ -1.95
VPS29-212ENST00000621131 HMCN2Q8NDA2 5059 aa2.86□□□□□ -1.95
VPS29-212ENST00000621131 PKD1P98161 4303 aa2.86□□□□□ -1.95
VPS29-212ENST00000621131 A0A087WTM6 91 aa2.86□□□□□ -1.95
VPS29-212ENST00000621131 A0A096LNI7 61 aa2.86□□□□□ -1.95
VPS29-212ENST00000621131 LRCOL1A6NCL2 159 aa2.86□□□□□ -1.95
VPS29-212ENST00000621131 Q6ZRN7 208 aaPredicted RBP2.86□□□□□ -1.95
VPS29-212ENST00000621131 Q8NDZ9 215 aa2.86□□□□□ -1.95
VPS29-212ENST00000621131 LAMTOR3Q9UHA4 124 aa2.86□□□□□ -1.95
VPS29-212ENST00000621131 C22orf24Q9Y442 160 aa2.86□□□□□ -1.95
VPS29-212ENST00000621131 VPS13BQ7Z7G8 4022 aa2.86□□□□□ -1.95
VPS29-212ENST00000621131 APOBP04114 4563 aaKnown RBP2.85□□□□□ -1.95
VPS29-212ENST00000621131 IGLV1-50A0A075B6I6 118 aa2.85□□□□□ -1.95
VPS29-212ENST00000621131 TEX49A0A1B0GTD5 131 aa2.85□□□□□ -1.95
VPS29-212ENST00000621131 FAM240AA0A1B0GVK7 77 aa2.85□□□□□ -1.95
VPS29-212ENST00000621131 Q6ZQY7 126 aa2.85□□□□□ -1.95
VPS29-212ENST00000621131 F8WEM9 126 aa2.84□□□□□ -1.95
VPS29-212ENST00000621131 PDE6GP18545 87 aa2.84□□□□□ -1.95
VPS29-212ENST00000621131 Q6ZRX8 168 aa2.84□□□□□ -1.95
VPS29-212ENST00000621131 FAM19A1Q7Z5A9 133 aa2.84□□□□□ -1.95
VPS29-212ENST00000621131 DSCR8Q96T75 97 aa2.84□□□□□ -1.95
VPS29-212ENST00000621131 KRTAP4-16G5E9R7 235 aaPredicted RBP2.83□□□□□ -1.96
VPS29-212ENST00000621131 UBE2AP49459 152 aa2.83□□□□□ -1.96
VPS29-212ENST00000621131 RBM3P98179 157 aaKnown RBP2.83□□□□□ -1.96
VPS29-212ENST00000621131 KRTAP5-7Q6L8G8 165 aa2.83□□□□□ -1.96
VPS29-212ENST00000621131 SIGMAR1Q99720 223 aa2.83□□□□□ -1.96
VPS29-212ENST00000621131 LRP1BQ9NZR2 4599 aa2.83□□□□□ -1.96
VPS29-212ENST00000621131 SPRR1AP35321 89 aa2.82□□□□□ -1.96
VPS29-212ENST00000621131 SDIM1Q6ZPB5 146 aa2.82□□□□□ -1.96
VPS29-212ENST00000621131 SPACA4Q8TDM5 124 aa2.82□□□□□ -1.96
VPS29-212ENST00000621131 C14orf132Q9NPU4 83 aa2.82□□□□□ -1.96
VPS29-212ENST00000621131 A0A1B0GV72 72 aa2.81□□□□□ -1.96
VPS29-212ENST00000621131 CCKP06307 115 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms