RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 IGLV6-57P01721 117 aa5.43□□□□□ -1.54
PTPDC1-204ENST00000620992 Q6ZQT0 140 aa5.43□□□□□ -1.54
PTPDC1-204ENST00000620992 IGLV8-61A0A075B6I0 122 aa5.43□□□□□ -1.54
PTPDC1-204ENST00000620992 PRR34Q9NV39 138 aa5.43□□□□□ -1.54
PTPDC1-204ENST00000620992 F8WDY8 70 aa5.42□□□□□ -1.54
PTPDC1-204ENST00000620992 Q6ZRX8 168 aa5.42□□□□□ -1.54
PTPDC1-204ENST00000620992 SMIM29Q86T20 159 aa5.42□□□□□ -1.54
PTPDC1-204ENST00000620992 hDV103S1A0JD37 113 aa5.41□□□□□ -1.54
PTPDC1-204ENST00000620992 TM2D3Q9BRN9 247 aa5.41□□□□□ -1.54
PTPDC1-204ENST00000620992 C9orf92A6NGG3 77 aa5.41□□□□□ -1.54
PTPDC1-204ENST00000620992 LIMD2Q9BT23 127 aa5.4□□□□□ -1.55
PTPDC1-204ENST00000620992 FBN1P35555 2871 aaKnown RBP5.4□□□□□ -1.55
PTPDC1-204ENST00000620992 A0A087WTM6 91 aa5.4□□□□□ -1.55
PTPDC1-204ENST00000620992 VPREB1P12018 145 aa5.39□□□□□ -1.55
PTPDC1-204ENST00000620992 C1orf64Q8NEQ6 169 aa5.39□□□□□ -1.55
PTPDC1-204ENST00000620992 Q96NJ1 140 aa5.39□□□□□ -1.55
PTPDC1-204ENST00000620992 PRR15LQ9BU68 103 aa5.39□□□□□ -1.55
PTPDC1-204ENST00000620992 LOC110117498A0A087WWA1 95 aa5.39□□□□□ -1.55
PTPDC1-204ENST00000620992 TNP2Q05952 138 aa5.39□□□□□ -1.55
PTPDC1-204ENST00000620992 GVQW2A0A096LPI5 108 aaPredicted RBP5.39□□□□□ -1.55
PTPDC1-204ENST00000620992 TMEM254Q8TBM7 123 aa5.38□□□□□ -1.55
PTPDC1-204ENST00000620992 TRAV7A0A075B6U4 112 aa5.38□□□□□ -1.55
PTPDC1-204ENST00000620992 C15orf56Q8N910 161 aa5.38□□□□□ -1.55
PTPDC1-204ENST00000620992 ELOF1P60002 83 aaKnown RBP5.37□□□□□ -1.55
PTPDC1-204ENST00000620992 BCE1O60756 84 aa5.37□□□□□ -1.55
PTPDC1-204ENST00000620992 COX6B2Q6YFQ2 88 aa5.37□□□□□ -1.55
PTPDC1-204ENST00000620992 C7orf65Q6ZTY9 151 aa5.35□□□□□ -1.55
PTPDC1-204ENST00000620992 Q8NBF4 154 aa5.35□□□□□ -1.55
PTPDC1-204ENST00000620992 LINC00313P59037 77 aa5.34□□□□□ -1.55
PTPDC1-204ENST00000620992 C9orf163Q8N9P6 203 aa5.34□□□□□ -1.56
PTPDC1-204ENST00000620992 SMIM26A0A096LP01 95 aa5.33□□□□□ -1.56
PTPDC1-204ENST00000620992 TRBV7-4A0A0J9YYF1 115 aa5.33□□□□□ -1.56
PTPDC1-204ENST00000620992 NDUFC1O43677 76 aa5.33□□□□□ -1.56
PTPDC1-204ENST00000620992 PSORS1C2Q9UIG4 136 aa5.33□□□□□ -1.56
PTPDC1-204ENST00000620992 ERC2-IT1O76042 136 aa5.33□□□□□ -1.56
PTPDC1-204ENST00000620992 CXCL6P80162 114 aa5.33□□□□□ -1.56
PTPDC1-204ENST00000620992 LINC00528Q8N1L1 170 aa5.33□□□□□ -1.56
PTPDC1-204ENST00000620992 V9GYY9 64 aa5.33□□□□□ -1.56
PTPDC1-204ENST00000620992 RPS28P62857 69 aaKnown RBP5.32□□□□□ -1.56
PTPDC1-204ENST00000620992 APLNQ9ULZ1 77 aa5.32□□□□□ -1.56
PTPDC1-204ENST00000620992 ATP5EP56381 51 aaPredicted RBP5.32□□□□□ -1.56
PTPDC1-204ENST00000620992 DSCR10P59022 87 aa5.32□□□□□ -1.56
PTPDC1-204ENST00000620992 KRTAP26-1Q6PEX3 210 aa5.32□□□□□ -1.56
PTPDC1-204ENST00000620992 IGLV1-50A0A075B6I6 118 aa5.31□□□□□ -1.56
PTPDC1-204ENST00000620992 ATP11AUNQ6ZP68 121 aa5.31□□□□□ -1.56
PTPDC1-204ENST00000620992 SPAG11AQ6PDA7 123 aa5.31□□□□□ -1.56
PTPDC1-204ENST00000620992 K7EQZ3 153 aa5.3□□□□□ -1.56
PTPDC1-204ENST00000620992 OXTP01178 125 aa5.3□□□□□ -1.56
PTPDC1-204ENST00000620992 WIPF1O43516 503 aa5.3□□□□□ -1.56
PTPDC1-204ENST00000620992 ZNF861PO60384 105 aa5.3□□□□□ -1.56
PTPDC1-204ENST00000620992 C1orf195Q5TG92 126 aa5.29□□□□□ -1.56
PTPDC1-204ENST00000620992 LINC00304Q8N9R0 145 aa5.28□□□□□ -1.56
PTPDC1-204ENST00000620992 H7BZZ5 65 aa5.28□□□□□ -1.56
PTPDC1-204ENST00000620992 TGP01266 2768 aa5.28□□□□□ -1.56
PTPDC1-204ENST00000620992 IGFL1Q6UW32 110 aa5.28□□□□□ -1.56
PTPDC1-204ENST00000620992 PMAIP1Q13794 54 aa5.27□□□□□ -1.57
PTPDC1-204ENST00000620992 Q8N377 158 aa5.27□□□□□ -1.57
PTPDC1-204ENST00000620992 KCNQ1DNQ9H478 68 aa5.27□□□□□ -1.57
PTPDC1-204ENST00000620992 LINC00336Q6ZUF6 198 aa5.26□□□□□ -1.57
PTPDC1-204ENST00000620992 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.26□□□□□ -1.57
PTPDC1-204ENST00000620992 TRAV22A0A0B4J277 110 aa5.26□□□□□ -1.57
PTPDC1-204ENST00000620992 KLKP1Q107X0 134 aa5.26□□□□□ -1.57
PTPDC1-204ENST00000620992 LINC01554Q52M75 96 aa5.24□□□□□ -1.57
PTPDC1-204ENST00000620992 PRR26Q8N8Z3 221 aa5.24□□□□□ -1.57
PTPDC1-204ENST00000620992 IGLV7-43P04211 117 aa5.24□□□□□ -1.57
PTPDC1-204ENST00000620992 PRO0628Q9UI54 55 aa5.24□□□□□ -1.57
PTPDC1-204ENST00000620992 A0A1B0GU69 56 aa5.22□□□□□ -1.57
PTPDC1-204ENST00000620992 A0A1W2PNM2 257 aa5.22□□□□□ -1.57
PTPDC1-204ENST00000620992 Q5XG85 94 aa5.21□□□□□ -1.58
PTPDC1-204ENST00000620992 IGLV5-48A0A075B6I7 105 aa5.2□□□□□ -1.58
PTPDC1-204ENST00000620992 MRPL34Q9BQ48 92 aaKnown RBP5.2□□□□□ -1.58
PTPDC1-204ENST00000620992 TLX1NBP0CAT3 122 aa5.2□□□□□ -1.58
PTPDC1-204ENST00000620992 Q8N1X5 172 aa5.2□□□□□ -1.58
PTPDC1-204ENST00000620992 KRTAP1-5Q9BYS1 174 aa5.19□□□□□ -1.58
PTPDC1-204ENST00000620992 A8MWP4 228 aa5.19□□□□□ -1.58
PTPDC1-204ENST00000620992 ANK2Q01484 3957 aa5.19□□□□□ -1.58
PTPDC1-204ENST00000620992 OCR1Q9BZK8 76 aa5.18□□□□□ -1.58
PTPDC1-204ENST00000620992 TP53AIP1Q9HCN2 124 aa5.18□□□□□ -1.58
PTPDC1-204ENST00000620992 ACYP2P14621 99 aa5.18□□□□□ -1.58
PTPDC1-204ENST00000620992 SSBP3-AS1Q7Z2R9 100 aa5.17□□□□□ -1.58
PTPDC1-204ENST00000620992 KRTAP7-1Q8IUC3 87 aa5.17□□□□□ -1.58
PTPDC1-204ENST00000620992 SPRR4Q96PI1 79 aa5.17□□□□□ -1.58
PTPDC1-204ENST00000620992 PLA2G2DQ9UNK4 145 aa5.17□□□□□ -1.58
PTPDC1-204ENST00000620992 IGLV5-37A0A075B6J1 123 aa5.17□□□□□ -1.58
PTPDC1-204ENST00000620992 KRTAP4-16G5E9R7 235 aaPredicted RBP5.17□□□□□ -1.58
PTPDC1-204ENST00000620992 C8orf17Q9NRJ1 99 aa5.17□□□□□ -1.58
PTPDC1-204ENST00000620992 SPRR1AP35321 89 aa5.16□□□□□ -1.58
PTPDC1-204ENST00000620992 PRR15Q8IV56 129 aa5.15□□□□□ -1.58
PTPDC1-204ENST00000620992 CNBPP62633 177 aaKnown RBP5.14□□□□□ -1.59
PTPDC1-204ENST00000620992 A0A1B0GVX0 72 aa5.13□□□□□ -1.59
PTPDC1-204ENST00000620992 M0R2T5 61 aa5.13□□□□□ -1.59
PTPDC1-204ENST00000620992 FP248Q71RG6 208 aaPredicted RBP5.13□□□□□ -1.59
PTPDC1-204ENST00000620992 A0A0D9SG42 100 aa5.13□□□□□ -1.59
PTPDC1-204ENST00000620992 A0A1B0GW54 56 aa5.12□□□□□ -1.59
PTPDC1-204ENST00000620992 KRTAP10-2P60368 255 aa5.12□□□□□ -1.59
PTPDC1-204ENST00000620992 IGLV7-46A0A075B6I9 117 aa5.11□□□□□ -1.59
PTPDC1-204ENST00000620992 FAM229BQ4G0N7 80 aa5.11□□□□□ -1.59
PTPDC1-204ENST00000620992 CSMD3Q7Z407 3707 aa5.11□□□□□ -1.59
PTPDC1-204ENST00000620992 A8MUN3 132 aa5.1□□□□□ -1.59
PTPDC1-204ENST00000620992 LOC101927531A0A1B0GV80 90 aa5.09□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms