RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 COA5Q86WW8 74 aa6.71□□□□□ -1.33
VPS11-207ENST00000620429 C9orf163Q8N9P6 203 aa6.71□□□□□ -1.34
VPS11-207ENST00000620429 SPRR4Q96PI1 79 aa6.71□□□□□ -1.34
VPS11-207ENST00000620429 DEFB135Q30KP9 77 aa6.7□□□□□ -1.34
VPS11-207ENST00000620429 Q8NBF4 154 aa6.7□□□□□ -1.34
VPS11-207ENST00000620429 CASC2Q6XLA1 102 aa6.7□□□□□ -1.34
VPS11-207ENST00000620429 C6orf48Q9UBA6 75 aa6.7□□□□□ -1.34
VPS11-207ENST00000620429 CNBPP62633 177 aaKnown RBP6.69□□□□□ -1.34
VPS11-207ENST00000620429 ASB16-AS1Q495Z4 193 aa6.69□□□□□ -1.34
VPS11-207ENST00000620429 Q8N377 158 aa6.69□□□□□ -1.34
VPS11-207ENST00000620429 PLA2G1BP04054 148 aaKnown RBP6.69□□□□□ -1.34
VPS11-207ENST00000620429 HTN3P15516 51 aa6.69□□□□□ -1.34
VPS11-207ENST00000620429 PRAC1Q96KF2 57 aa6.68□□□□□ -1.34
VPS11-207ENST00000620429 NBEAL1Q6ZS30 2694 aa6.67□□□□□ -1.34
VPS11-207ENST00000620429 IGKV2D-24A0A075B6R9 120 aa6.67□□□□□ -1.34
VPS11-207ENST00000620429 TNP2Q05952 138 aa6.67□□□□□ -1.34
VPS11-207ENST00000620429 H0Y9P7 68 aa6.67□□□□□ -1.34
VPS11-207ENST00000620429 SPINK7P58062 85 aa6.67□□□□□ -1.34
VPS11-207ENST00000620429 IGLV7-46A0A075B6I9 117 aa6.66□□□□□ -1.34
VPS11-207ENST00000620429 LELP1Q5T871 98 aa6.66□□□□□ -1.34
VPS11-207ENST00000620429 A0A087X002 238 aa6.66□□□□□ -1.34
VPS11-207ENST00000620429 C1orf137Q5JT78 98 aa6.66□□□□□ -1.34
VPS11-207ENST00000620429 PRR34Q9NV39 138 aa6.65□□□□□ -1.34
VPS11-207ENST00000620429 CAMK2N2Q96S95 79 aa6.64□□□□□ -1.35
VPS11-207ENST00000620429 KRTAP29-1A8MX34 341 aaPredicted RBP6.63□□□□□ -1.35
VPS11-207ENST00000620429 PKD1L1Q8TDX9 2849 aa6.63□□□□□ -1.35
VPS11-207ENST00000620429 DEFB105AQ8NG35 78 aa6.63□□□□□ -1.35
VPS11-207ENST00000620429 SERTAD4-AS1Q5TG53 156 aa6.62□□□□□ -1.35
VPS11-207ENST00000620429 SPAG11AQ6PDA7 123 aa6.62□□□□□ -1.35
VPS11-207ENST00000620429 WFDC13Q8IUB5 93 aa6.62□□□□□ -1.35
VPS11-207ENST00000620429 MEGF8Q7Z7M0 2845 aa6.62□□□□□ -1.35
VPS11-207ENST00000620429 Q8NAQ8 132 aa6.61□□□□□ -1.35
VPS11-207ENST00000620429 DEFB116Q30KQ4 102 aa6.6□□□□□ -1.35
VPS11-207ENST00000620429 ADM2Q7Z4H4 148 aa6.6□□□□□ -1.35
VPS11-207ENST00000620429 SPART-AS1P0CW21 52 aa6.6□□□□□ -1.35
VPS11-207ENST00000620429 EGFEM1PQ0D2K5 195 aa6.6□□□□□ -1.35
VPS11-207ENST00000620429 C7orf33Q8WU49 177 aa6.59□□□□□ -1.35
VPS11-207ENST00000620429 WFDC10BQ8IUB3 73 aa6.58□□□□□ -1.36
VPS11-207ENST00000620429 KRTAP10-11P60412 298 aa6.58□□□□□ -1.36
VPS11-207ENST00000620429 DHRS4-AS1Q9P1J3 65 aa6.58□□□□□ -1.36
VPS11-207ENST00000620429 CMYA5Q8N3K9 4069 aa6.57□□□□□ -1.36
VPS11-207ENST00000620429 RTL8CO15255 209 aa6.56□□□□□ -1.36
VPS11-207ENST00000620429 TENM3Q9P273 2699 aa6.55□□□□□ -1.36
VPS11-207ENST00000620429 IGLV5-37A0A075B6J1 123 aa6.55□□□□□ -1.36
VPS11-207ENST00000620429 C15orf56Q8N910 161 aa6.55□□□□□ -1.36
VPS11-207ENST00000620429 MGAM2Q2M2H8 2515 aa6.55□□□□□ -1.36
VPS11-207ENST00000620429 IGLV1-50A0A075B6I6 118 aa6.55□□□□□ -1.36
VPS11-207ENST00000620429 KRTAP26-1Q6PEX3 210 aa6.54□□□□□ -1.36
VPS11-207ENST00000620429 NOTCH1P46531 2555 aa6.54□□□□□ -1.36
VPS11-207ENST00000620429 Q6ZRX8 168 aa6.53□□□□□ -1.36
VPS11-207ENST00000620429 LINC00476Q8WZB0 136 aa6.53□□□□□ -1.36
VPS11-207ENST00000620429 KRTAP4-16G5E9R7 235 aaPredicted RBP6.5□□□□□ -1.37
VPS11-207ENST00000620429 RETNLBQ9BQ08 111 aa6.5□□□□□ -1.37
VPS11-207ENST00000620429 HRES1P13985 223 aa6.49□□□□□ -1.37
VPS11-207ENST00000620429 RPL37AP8A6NKH3 93 aa6.49□□□□□ -1.37
VPS11-207ENST00000620429 RPL37AP61513 92 aaKnown RBP6.48□□□□□ -1.37
VPS11-207ENST00000620429 SPRR1AP35321 89 aa6.47□□□□□ -1.37
VPS11-207ENST00000620429 DNAH3Q8TD57 4116 aa6.47□□□□□ -1.37
VPS11-207ENST00000620429 H0Y9J4 135 aa6.47□□□□□ -1.37
VPS11-207ENST00000620429 PRKDCP78527 4128 aaKnown RBP6.46□□□□□ -1.38
VPS11-207ENST00000620429 PCOTHQ58A44 107 aa6.46□□□□□ -1.38
VPS11-207ENST00000620429 IGFL1Q6UW32 110 aa6.46□□□□□ -1.38
VPS11-207ENST00000620429 A8MWP4 228 aa6.45□□□□□ -1.38
VPS11-207ENST00000620429 WWC2-AS2Q96NR7 200 aa6.45□□□□□ -1.38
VPS11-207ENST00000620429 A0A087WSZ3 146 aa6.44□□□□□ -1.38
VPS11-207ENST00000620429 FAM168BA1KXE4 195 aa6.44□□□□□ -1.38
VPS11-207ENST00000620429 SPATA8Q6RVD6 105 aa6.44□□□□□ -1.38
VPS11-207ENST00000620429 DEFB131BA0A096LNP1 70 aa6.44□□□□□ -1.38
VPS11-207ENST00000620429 H3BNG1 76 aa6.44□□□□□ -1.38
VPS11-207ENST00000620429 IGLV8-61A0A075B6I0 122 aa6.43□□□□□ -1.38
VPS11-207ENST00000620429 CSAG1Q6PB30 78 aa6.43□□□□□ -1.38
VPS11-207ENST00000620429 LINC01556Q5JQF7 62 aa6.42□□□□□ -1.38
VPS11-207ENST00000620429 Q6ZR54 194 aa6.42□□□□□ -1.38
VPS11-207ENST00000620429 TP53AIP1Q9HCN2 124 aa6.42□□□□□ -1.38
VPS11-207ENST00000620429 PLA2G2DQ9UNK4 145 aa6.42□□□□□ -1.38
VPS11-207ENST00000620429 MMP24-AS1A0A0U1RRL7 71 aa6.41□□□□□ -1.38
VPS11-207ENST00000620429 TGP01266 2768 aa6.4□□□□□ -1.38
VPS11-207ENST00000620429 HUWE1Q7Z6Z7 4374 aaKnown RBP6.4□□□□□ -1.39
VPS11-207ENST00000620429 IGKV2-24A0A0C4DH68 120 aa6.4□□□□□ -1.39
VPS11-207ENST00000620429 A0A0G2JQZ4 141 aa6.4□□□□□ -1.39
VPS11-207ENST00000620429 A0A1W2PNN7 141 aa6.4□□□□□ -1.39
VPS11-207ENST00000620429 TLX1NBP0CAT3 122 aa6.4□□□□□ -1.39
VPS11-207ENST00000620429 LINC00472Q9H8W2 130 aa6.39□□□□□ -1.39
VPS11-207ENST00000620429 ZNF706Q9Y5V0 76 aaPredicted RBP6.39□□□□□ -1.39
VPS11-207ENST00000620429 KRTAP7-1Q8IUC3 87 aa6.38□□□□□ -1.39
VPS11-207ENST00000620429 K7EIL1 84 aa6.37□□□□□ -1.39
VPS11-207ENST00000620429 CASC10Q5T4H9 136 aa6.36□□□□□ -1.39
VPS11-207ENST00000620429 C1orf134Q5TEV5 83 aa6.36□□□□□ -1.39
VPS11-207ENST00000620429 REG3GQ6UW15 175 aa6.34□□□□□ -1.39
VPS11-207ENST00000620429 DNAH10OSP0CZ25 163 aa6.34□□□□□ -1.39
VPS11-207ENST00000620429 ALMS1Q8TCU4 4167 aa6.33□□□□□ -1.4
VPS11-207ENST00000620429 MIR22HGQ0VDD5 57 aa6.32□□□□□ -1.4
VPS11-207ENST00000620429 LYSTQ99698 3801 aa6.32□□□□□ -1.4
VPS11-207ENST00000620429 DNAH1Q9P2D7 4330 aa6.31□□□□□ -1.4
VPS11-207ENST00000620429 ROMO1P60602 79 aa6.31□□□□□ -1.4
VPS11-207ENST00000620429 COL7A1Q02388 2944 aa6.31□□□□□ -1.4
VPS11-207ENST00000620429 IGHV6-1A0A0B4J1U7 121 aa6.31□□□□□ -1.4
VPS11-207ENST00000620429 STAB2Q8WWQ8 2551 aa6.31□□□□□ -1.4
VPS11-207ENST00000620429 A0A1B0GU69 56 aa6.3□□□□□ -1.4
VPS11-207ENST00000620429 PRLHP81277 87 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 169 ms