RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 KCNQ1DNQ9H478 68 aa12.39□□□□□ -0.43
LAPTM4B-204ENST00000619747 A0A096LNI7 61 aa12.35□□□□□ -0.43
LAPTM4B-204ENST00000619747 SRRM2Q9UQ35 2752 aaKnown RBP12.35□□□□□ -0.43
LAPTM4B-204ENST00000619747 SMIM29Q86T20 159 aa12.35□□□□□ -0.43
LAPTM4B-204ENST00000619747 IGLV1-50A0A075B6I6 118 aa12.35□□□□□ -0.43
LAPTM4B-204ENST00000619747 RBM12B-AS1Q9P1G2 102 aa12.35□□□□□ -0.43
LAPTM4B-204ENST00000619747 C3orf84H3BNL1 204 aa12.33□□□□□ -0.44
LAPTM4B-204ENST00000619747 CHTF8P0CG12 524 aa12.33□□□□□ -0.44
LAPTM4B-204ENST00000619747 ETDCA0A1B0GVM5 59 aa12.32□□□□□ -0.44
LAPTM4B-204ENST00000619747 Q9BRP9 147 aa12.31□□□□□ -0.44
LAPTM4B-204ENST00000619747 PLA2G2DQ9UNK4 145 aa12.3□□□□□ -0.44
LAPTM4B-204ENST00000619747 DYNC2H1Q8NCM8 4307 aaKnown RBP12.3□□□□□ -0.44
LAPTM4B-204ENST00000619747 A0A1W2PNN7 141 aa12.3□□□□□ -0.44
LAPTM4B-204ENST00000619747 NUPR2A6NF83 97 aa12.29□□□□□ -0.44
LAPTM4B-204ENST00000619747 ST20-AS1Q8NBB2 130 aa12.29□□□□□ -0.44
LAPTM4B-204ENST00000619747 NBDYA0A0U1RRE5 68 aa12.29□□□□□ -0.44
LAPTM4B-204ENST00000619747 Q6ZRX8 168 aa12.29□□□□□ -0.44
LAPTM4B-204ENST00000619747 KTN1-AS1Q86SY8 53 aa12.27□□□□□ -0.44
LAPTM4B-204ENST00000619747 KMT2AQ03164 3969 aa12.27□□□□□ -0.45
LAPTM4B-204ENST00000619747 KRTAP4-16G5E9R7 235 aaPredicted RBP12.27□□□□□ -0.45
LAPTM4B-204ENST00000619747 H3BQ85 93 aa12.27□□□□□ -0.45
LAPTM4B-204ENST00000619747 UBE2BP63146 152 aa12.26□□□□□ -0.45
LAPTM4B-204ENST00000619747 Q8N377 158 aa12.26□□□□□ -0.45
LAPTM4B-204ENST00000619747 SPTSSBQ8NFR3 76 aa12.26□□□□□ -0.45
LAPTM4B-204ENST00000619747 IGLV5-37A0A075B6J1 123 aa12.26□□□□□ -0.45
LAPTM4B-204ENST00000619747 Q5VV11 94 aa12.26□□□□□ -0.45
LAPTM4B-204ENST00000619747 C16orf90A8MZG2 172 aa12.24□□□□□ -0.45
LAPTM4B-204ENST00000619747 CNBPP62633 177 aaKnown RBP12.24□□□□□ -0.45
LAPTM4B-204ENST00000619747 FBN3Q75N90 2809 aa12.22□□□□□ -0.45
LAPTM4B-204ENST00000619747 SPRR1AP35321 89 aa12.22□□□□□ -0.45
LAPTM4B-204ENST00000619747 ZCCHC13Q8WW36 166 aaKnown RBP12.22□□□□□ -0.45
LAPTM4B-204ENST00000619747 PRLHP81277 87 aa12.22□□□□□ -0.45
LAPTM4B-204ENST00000619747 REG3GQ6UW15 175 aa12.22□□□□□ -0.45
LAPTM4B-204ENST00000619747 LCE6AA0A183 80 aa12.21□□□□□ -0.45
LAPTM4B-204ENST00000619747 CHKB-CPT1BH3BT56 60 aa12.21□□□□□ -0.45
LAPTM4B-204ENST00000619747 DHRS4-AS1Q9P1J3 65 aa12.2□□□□□ -0.46
LAPTM4B-204ENST00000619747 PHF5AQ7RTV0 110 aaKnown RBP12.2□□□□□ -0.46
LAPTM4B-204ENST00000619747 KRTAP11-1Q8IUC1 163 aa12.18□□□□□ -0.46
LAPTM4B-204ENST00000619747 C14orf177Q52M58 125 aa12.17□□□□□ -0.46
LAPTM4B-204ENST00000619747 Q6ZRN7 208 aaPredicted RBP12.17□□□□□ -0.46
LAPTM4B-204ENST00000619747 CYP4F30PQ9H0H9 118 aa12.17□□□□□ -0.46
LAPTM4B-204ENST00000619747 PANO1I0J062 215 aa12.17□□□□□ -0.46
LAPTM4B-204ENST00000619747 C9orf163Q8N9P6 203 aa12.15□□□□□ -0.46
LAPTM4B-204ENST00000619747 UBE2AP49459 152 aa12.14□□□□□ -0.47
LAPTM4B-204ENST00000619747 VPS13DQ5THJ4 4388 aa12.14□□□□□ -0.47
LAPTM4B-204ENST00000619747 HCG22E2RYF7 251 aa12.14□□□□□ -0.47
LAPTM4B-204ENST00000619747 A0A0G2JQZ4 141 aa12.13□□□□□ -0.47
LAPTM4B-204ENST00000619747 C4orf48Q5BLP8 95 aa12.11□□□□□ -0.47
LAPTM4B-204ENST00000619747 PRR15LQ9BU68 103 aa12.11□□□□□ -0.47
LAPTM4B-204ENST00000619747 LCA10Q71F78 164 aa12.1□□□□□ -0.47
LAPTM4B-204ENST00000619747 Q8N9P0 234 aaPredicted RBP12.08□□□□□ -0.48
LAPTM4B-204ENST00000619747 DNAH2Q9P225 4427 aa12.07□□□□□ -0.48
LAPTM4B-204ENST00000619747 IGLV5-48A0A075B6I7 105 aa12.07□□□□□ -0.48
LAPTM4B-204ENST00000619747 C1orf137Q5JT78 98 aa12.07□□□□□ -0.48
LAPTM4B-204ENST00000619747 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.06□□□□□ -0.48
LAPTM4B-204ENST00000619747 K7EQZ3 153 aa12.05□□□□□ -0.48
LAPTM4B-204ENST00000619747 A0A087WTM6 91 aa12.04□□□□□ -0.48
LAPTM4B-204ENST00000619747 A0A1W2PNM2 257 aa12.04□□□□□ -0.48
LAPTM4B-204ENST00000619747 ATP11AUNQ6ZP68 121 aa12.04□□□□□ -0.48
LAPTM4B-204ENST00000619747 A6NN06 94 aa12.04□□□□□ -0.48
LAPTM4B-204ENST00000619747 A6NED7 52 aa12.03□□□□□ -0.48
LAPTM4B-204ENST00000619747 NDUFS5O43920 106 aa12.03□□□□□ -0.48
LAPTM4B-204ENST00000619747 LY6G6CO95867 125 aa12.03□□□□□ -0.48
LAPTM4B-204ENST00000619747 HECTD4Q9Y4D8 3996 aa12.02□□□□□ -0.49
LAPTM4B-204ENST00000619747 DSCR10P59022 87 aa12.02□□□□□ -0.49
LAPTM4B-204ENST00000619747 DEFB116Q30KQ4 102 aa12.02□□□□□ -0.49
LAPTM4B-204ENST00000619747 TNP2Q05952 138 aa12.01□□□□□ -0.49
LAPTM4B-204ENST00000619747 LIMD2Q9BT23 127 aa12.01□□□□□ -0.49
LAPTM4B-204ENST00000619747 NDUFB1O75438 58 aa11.99□□□□□ -0.49
LAPTM4B-204ENST00000619747 LINC00208Q96KT6 92 aa11.98□□□□□ -0.49
LAPTM4B-204ENST00000619747 LINC00476Q8WZB0 136 aa11.98□□□□□ -0.49
LAPTM4B-204ENST00000619747 Q6ZR54 194 aa11.97□□□□□ -0.49
LAPTM4B-204ENST00000619747 RTL8CO15255 209 aa11.96□□□□□ -0.49
LAPTM4B-204ENST00000619747 Q8NBF4 154 aa11.94□□□□□ -0.5
LAPTM4B-204ENST00000619747 FRAS1Q86XX4 4008 aa11.94□□□□□ -0.5
LAPTM4B-204ENST00000619747 SPACA4Q8TDM5 124 aa11.93□□□□□ -0.5
LAPTM4B-204ENST00000619747 MP68P56378 58 aa11.92□□□□□ -0.5
LAPTM4B-204ENST00000619747 IGFL1Q6UW32 110 aa11.92□□□□□ -0.5
LAPTM4B-204ENST00000619747 WFDC13Q8IUB5 93 aa11.92□□□□□ -0.5
LAPTM4B-204ENST00000619747 C1orf134Q5TEV5 83 aa11.92□□□□□ -0.5
LAPTM4B-204ENST00000619747 C7orf65Q6ZTY9 151 aa11.92□□□□□ -0.5
LAPTM4B-204ENST00000619747 Q75L30 129 aa11.91□□□□□ -0.5
LAPTM4B-204ENST00000619747 C8orf87E5RJ46 101 aa11.91□□□□□ -0.5
LAPTM4B-204ENST00000619747 DNAH6Q9C0G6 4158 aa11.88□□□□□ -0.51
LAPTM4B-204ENST00000619747 IGLV5-52A0A0A0MRZ9 124 aa11.87□□□□□ -0.51
LAPTM4B-204ENST00000619747 MOBPQ13875 183 aa11.86□□□□□ -0.51
LAPTM4B-204ENST00000619747 CDC42SE1Q9NRR8 79 aa11.86□□□□□ -0.51
LAPTM4B-204ENST00000619747 SPRR4Q96PI1 79 aa11.85□□□□□ -0.51
LAPTM4B-204ENST00000619747 A0A087WSZ3 146 aa11.84□□□□□ -0.51
LAPTM4B-204ENST00000619747 LOC101927531A0A1B0GV80 90 aa11.83□□□□□ -0.52
LAPTM4B-204ENST00000619747 DNAH17Q9UFH2 4485 aa11.83□□□□□ -0.52
LAPTM4B-204ENST00000619747 H0Y9J4 135 aa11.83□□□□□ -0.52
LAPTM4B-204ENST00000619747 HYDINQ4G0P3 5121 aa11.82□□□□□ -0.52
LAPTM4B-204ENST00000619747 A0A1B0GW54 56 aa11.81□□□□□ -0.52
LAPTM4B-204ENST00000619747 SPANXA2-OT1Q8N9U9 137 aa11.81□□□□□ -0.52
LAPTM4B-204ENST00000619747 PSORS1C2Q9UIG4 136 aa11.81□□□□□ -0.52
LAPTM4B-204ENST00000619747 DNAH8Q96JB1 4490 aa11.8□□□□□ -0.52
LAPTM4B-204ENST00000619747 KRTAP13-1Q8IUC0 172 aa11.8□□□□□ -0.52
LAPTM4B-204ENST00000619747 H0Y9P7 68 aa11.79□□□□□ -0.52
LAPTM4B-204ENST00000619747 COA5Q86WW8 74 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms