RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 A0A0G2JQZ4 141 aa2.74□□□□□ -1.97
SEC22B-202ENST00000618538 A0A1W2PNN7 141 aa2.74□□□□□ -1.97
SEC22B-202ENST00000618538 F8WDY8 70 aa2.74□□□□□ -1.97
SEC22B-202ENST00000618538 K7EIL1 84 aa2.74□□□□□ -1.97
SEC22B-202ENST00000618538 KLKP1Q107X0 134 aa2.74□□□□□ -1.97
SEC22B-202ENST00000618538 Q5XG85 94 aa2.74□□□□□ -1.97
SEC22B-202ENST00000618538 MRAPQ8TCY5 172 aa2.74□□□□□ -1.97
SEC22B-202ENST00000618538 DNAH7Q8WXX0 4024 aa2.74□□□□□ -1.97
SEC22B-202ENST00000618538 EPM2AB3EWF7 344 aa2.74□□□□□ -1.97
SEC22B-202ENST00000618538 BCE1O60756 84 aa2.74□□□□□ -1.97
SEC22B-202ENST00000618538 PRYO14603 147 aa2.73□□□□□ -1.97
SEC22B-202ENST00000618538 PLA2G1BP04054 148 aaKnown RBP2.73□□□□□ -1.97
SEC22B-202ENST00000618538 SMIM29Q86T20 159 aa2.73□□□□□ -1.97
SEC22B-202ENST00000618538 KRTAP11-1Q8IUC1 163 aa2.73□□□□□ -1.97
SEC22B-202ENST00000618538 FAM236DA0A1B0GTK5 79 aa2.73□□□□□ -1.97
SEC22B-202ENST00000618538 FAM236CP0DP71 79 aa2.73□□□□□ -1.97
SEC22B-202ENST00000618538 NREPQ16612 68 aa2.73□□□□□ -1.97
SEC22B-202ENST00000618538 MRPL55Q7Z7F7 128 aaKnown RBP2.73□□□□□ -1.97
SEC22B-202ENST00000618538 OCR1Q9BZK8 76 aa2.73□□□□□ -1.97
SEC22B-202ENST00000618538 A0A096LNI7 61 aa2.72□□□□□ -1.97
SEC22B-202ENST00000618538 F8WEM9 126 aa2.72□□□□□ -1.97
SEC22B-202ENST00000618538 C4orf26Q17RF5 130 aa2.72□□□□□ -1.97
SEC22B-202ENST00000618538 DHRS4-AS1Q9P1J3 65 aa2.72□□□□□ -1.97
SEC22B-202ENST00000618538 DSCR10P59022 87 aa2.72□□□□□ -1.97
SEC22B-202ENST00000618538 C1orf137Q5JT78 98 aa2.72□□□□□ -1.97
SEC22B-202ENST00000618538 Q8NBF4 154 aa2.72□□□□□ -1.97
SEC22B-202ENST00000618538 HMCN1Q96RW7 5635 aa2.71□□□□□ -1.98
SEC22B-202ENST00000618538 ETDCA0A1B0GVM5 59 aa2.71□□□□□ -1.98
SEC22B-202ENST00000618538 PRLHP81277 87 aa2.71□□□□□ -1.98
SEC22B-202ENST00000618538 TMEM254Q8TBM7 123 aa2.71□□□□□ -1.98
SEC22B-202ENST00000618538 SPRR4Q96PI1 79 aa2.71□□□□□ -1.98
SEC22B-202ENST00000618538 DYNC2H1Q8NCM8 4307 aaKnown RBP2.71□□□□□ -1.98
SEC22B-202ENST00000618538 A0A0U1RQV1 116 aa2.7□□□□□ -1.98
SEC22B-202ENST00000618538 K7EQZ3 153 aa2.7□□□□□ -1.98
SEC22B-202ENST00000618538 PLECQ15149 4684 aaKnown RBP2.7□□□□□ -1.98
SEC22B-202ENST00000618538 IGKV2-24A0A0C4DH68 120 aa2.7□□□□□ -1.98
SEC22B-202ENST00000618538 CHTF8P0CG12 524 aa2.7□□□□□ -1.98
SEC22B-202ENST00000618538 UBE2BP63146 152 aa2.7□□□□□ -1.98
SEC22B-202ENST00000618538 REG3GQ6UW15 175 aa2.7□□□□□ -1.98
SEC22B-202ENST00000618538 FP248Q71RG6 208 aaPredicted RBP2.7□□□□□ -1.98
SEC22B-202ENST00000618538 LINC00476Q8WZB0 136 aa2.7□□□□□ -1.98
SEC22B-202ENST00000618538 PANO1I0J062 215 aa2.69□□□□□ -1.98
SEC22B-202ENST00000618538 IGFL1Q6UW32 110 aa2.69□□□□□ -1.98
SEC22B-202ENST00000618538 HRCT1Q6UXD1 115 aa2.69□□□□□ -1.98
SEC22B-202ENST00000618538 HIGD2AQ9BW72 106 aa2.69□□□□□ -1.98
SEC22B-202ENST00000618538 LCE6AA0A183 80 aa2.69□□□□□ -1.98
SEC22B-202ENST00000618538 FUSP35637 526 aaKnown RBP eCLIP2.69□□□□□ -1.98
SEC22B-202ENST00000618538 CNBPP62633 177 aaKnown RBP2.69□□□□□ -1.98
SEC22B-202ENST00000618538 DEFB116Q30KQ4 102 aa2.69□□□□□ -1.98
SEC22B-202ENST00000618538 FAM229BQ4G0N7 80 aa2.69□□□□□ -1.98
SEC22B-202ENST00000618538 SERP1Q9Y6X1 66 aa2.69□□□□□ -1.98
SEC22B-202ENST00000618538 FBN3Q75N90 2809 aa2.69□□□□□ -1.98
SEC22B-202ENST00000618538 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.68□□□□□ -1.98
SEC22B-202ENST00000618538 C16orf90A8MZG2 172 aa2.68□□□□□ -1.98
SEC22B-202ENST00000618538 PHF5AQ7RTV0 110 aaKnown RBP2.68□□□□□ -1.98
SEC22B-202ENST00000618538 LINC00474Q9P2X8 69 aa2.68□□□□□ -1.98
SEC22B-202ENST00000618538 APLNQ9ULZ1 77 aa2.68□□□□□ -1.98
SEC22B-202ENST00000618538 MEGF8Q7Z7M0 2845 aa2.68□□□□□ -1.98
SEC22B-202ENST00000618538 IGLV8-61A0A075B6I0 122 aa2.68□□□□□ -1.98
SEC22B-202ENST00000618538 STARD9Q9P2P6 4700 aa2.67□□□□□ -1.98
SEC22B-202ENST00000618538 A0A1B0GW54 56 aa2.67□□□□□ -1.98
SEC22B-202ENST00000618538 ZCCHC13Q8WW36 166 aaKnown RBP2.67□□□□□ -1.98
SEC22B-202ENST00000618538 LRCOL1A6NCL2 159 aa2.66□□□□□ -1.98
SEC22B-202ENST00000618538 KRTAP29-1A8MX34 341 aaPredicted RBP2.66□□□□□ -1.98
SEC22B-202ENST00000618538 C5orf47Q569G3 176 aa2.66□□□□□ -1.98
SEC22B-202ENST00000618538 PRKDCP78527 4128 aaKnown RBP2.66□□□□□ -1.98
SEC22B-202ENST00000618538 A0A087WSZ3 146 aa2.66□□□□□ -1.98
SEC22B-202ENST00000618538 PSCAO43653 123 aa2.66□□□□□ -1.98
SEC22B-202ENST00000618538 NDUFC1O43677 76 aa2.66□□□□□ -1.98
SEC22B-202ENST00000618538 RPL37AP61513 92 aaKnown RBP2.66□□□□□ -1.98
SEC22B-202ENST00000618538 Q6ZRN7 208 aaPredicted RBP2.66□□□□□ -1.98
SEC22B-202ENST00000618538 VPS13DQ5THJ4 4388 aa2.66□□□□□ -1.98
SEC22B-202ENST00000618538 KRTAP13-1Q8IUC0 172 aa2.65□□□□□ -1.98
SEC22B-202ENST00000618538 DNAH2Q9P225 4427 aa2.64□□□□□ -1.99
SEC22B-202ENST00000618538 HCG22E2RYF7 251 aa2.64□□□□□ -1.99
SEC22B-202ENST00000618538 SPRR1BP22528 89 aa2.64□□□□□ -1.99
SEC22B-202ENST00000618538 WFDC13Q8IUB5 93 aa2.64□□□□□ -1.99
SEC22B-202ENST00000618538 C9orf163Q8N9P6 203 aa2.64□□□□□ -1.99
SEC22B-202ENST00000618538 DNAH8Q96JB1 4490 aa2.64□□□□□ -1.99
SEC22B-202ENST00000618538 SMIM26A0A096LP01 95 aa2.64□□□□□ -1.99
SEC22B-202ENST00000618538 UBE2AP49459 152 aa2.64□□□□□ -1.99
SEC22B-202ENST00000618538 LINC00336Q6ZUF6 198 aa2.64□□□□□ -1.99
SEC22B-202ENST00000618538 UBE2DNLQ8IWF7 75 aa2.64□□□□□ -1.99
SEC22B-202ENST00000618538 HECTD4Q9Y4D8 3996 aa2.63□□□□□ -1.99
SEC22B-202ENST00000618538 H0Y9J4 135 aa2.63□□□□□ -1.99
SEC22B-202ENST00000618538 ATP5EP56381 51 aaPredicted RBP2.63□□□□□ -1.99
SEC22B-202ENST00000618538 LINC00472Q9H8W2 130 aa2.63□□□□□ -1.99
SEC22B-202ENST00000618538 TGP01266 2768 aa2.63□□□□□ -1.99
SEC22B-202ENST00000618538 NBDYA0A0U1RRE5 68 aa2.62□□□□□ -1.99
SEC22B-202ENST00000618538 DNAH17Q9UFH2 4485 aa2.62□□□□□ -1.99
SEC22B-202ENST00000618538 hDV103S1A0JD37 113 aa2.62□□□□□ -1.99
SEC22B-202ENST00000618538 PRR4Q16378 134 aa2.62□□□□□ -1.99
SEC22B-202ENST00000618538 Q96NJ1 140 aa2.62□□□□□ -1.99
SEC22B-202ENST00000618538 KMT2AQ03164 3969 aa2.62□□□□□ -1.99
SEC22B-202ENST00000618538 PRR15Q8IV56 129 aa2.61□□□□□ -1.99
SEC22B-202ENST00000618538 C1orf64Q8NEQ6 169 aa2.61□□□□□ -1.99
SEC22B-202ENST00000618538 MPLKIPQ8TAP9 179 aa2.61□□□□□ -1.99
SEC22B-202ENST00000618538 SPACA4Q8TDM5 124 aa2.61□□□□□ -1.99
SEC22B-202ENST00000618538 B9D2Q9BPU9 175 aa2.61□□□□□ -1.99
SEC22B-202ENST00000618538 FRAS1Q86XX4 4008 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 183 ms