RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 ATP5EP56381 51 aaPredicted RBP7.85□□□□□ -1.15
CIITA-212ENST00000618207 KLKP1Q107X0 134 aa7.85□□□□□ -1.15
CIITA-212ENST00000618207 KRTAP11-1Q8IUC1 163 aa7.85□□□□□ -1.15
CIITA-212ENST00000618207 PDE6GP18545 87 aa7.84□□□□□ -1.15
CIITA-212ENST00000618207 LRCOL1A6NCL2 159 aa7.84□□□□□ -1.15
CIITA-212ENST00000618207 PANO1I0J062 215 aa7.84□□□□□ -1.15
CIITA-212ENST00000618207 MPLKIPQ8TAP9 179 aa7.84□□□□□ -1.15
CIITA-212ENST00000618207 C14orf177Q52M58 125 aa7.83□□□□□ -1.16
CIITA-212ENST00000618207 Q8N9L7 120 aa7.82□□□□□ -1.16
CIITA-212ENST00000618207 KMT2AQ03164 3969 aa7.82□□□□□ -1.16
CIITA-212ENST00000618207 RBM12B-AS1Q9P1G2 102 aa7.82□□□□□ -1.16
CIITA-212ENST00000618207 C9orf163Q8N9P6 203 aa7.81□□□□□ -1.16
CIITA-212ENST00000618207 F8WEM9 126 aa7.81□□□□□ -1.16
CIITA-212ENST00000618207 Q6ZRN7 208 aaPredicted RBP7.81□□□□□ -1.16
CIITA-212ENST00000618207 C1orf137Q5JT78 98 aa7.8□□□□□ -1.16
CIITA-212ENST00000618207 ATP5EP2Q5VTU8 51 aa7.8□□□□□ -1.16
CIITA-212ENST00000618207 FBN3Q75N90 2809 aa7.8□□□□□ -1.16
CIITA-212ENST00000618207 TRAV7A0A075B6U4 112 aa7.79□□□□□ -1.16
CIITA-212ENST00000618207 NDUFC1O43677 76 aa7.79□□□□□ -1.16
CIITA-212ENST00000618207 BCE1O60756 84 aa7.79□□□□□ -1.16
CIITA-212ENST00000618207 NREPQ16612 68 aa7.79□□□□□ -1.16
CIITA-212ENST00000618207 DYNC2H1Q8NCM8 4307 aaKnown RBP7.77□□□□□ -1.16
CIITA-212ENST00000618207 A0A1W2PNM2 257 aa7.77□□□□□ -1.17
CIITA-212ENST00000618207 FAM229BQ4G0N7 80 aa7.77□□□□□ -1.17
CIITA-212ENST00000618207 IGLV5-48A0A075B6I7 105 aa7.77□□□□□ -1.17
CIITA-212ENST00000618207 H3BS24 57 aa7.77□□□□□ -1.17
CIITA-212ENST00000618207 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.77□□□□□ -1.17
CIITA-212ENST00000618207 LY6G6CO95867 125 aa7.76□□□□□ -1.17
CIITA-212ENST00000618207 SNURFQ9Y675 71 aa7.75□□□□□ -1.17
CIITA-212ENST00000618207 A0A087WTM6 91 aa7.74□□□□□ -1.17
CIITA-212ENST00000618207 BPY2O14599 106 aa7.74□□□□□ -1.17
CIITA-212ENST00000618207 UBE2AP49459 152 aa7.74□□□□□ -1.17
CIITA-212ENST00000618207 SMIM29Q86T20 159 aa7.74□□□□□ -1.17
CIITA-212ENST00000618207 TNP2Q05952 138 aa7.74□□□□□ -1.17
CIITA-212ENST00000618207 LINC00476Q8WZB0 136 aa7.74□□□□□ -1.17
CIITA-212ENST00000618207 KTN1-AS1Q86SY8 53 aa7.73□□□□□ -1.17
CIITA-212ENST00000618207 CXCL6P80162 114 aa7.73□□□□□ -1.17
CIITA-212ENST00000618207 DEFB116Q30KQ4 102 aa7.72□□□□□ -1.17
CIITA-212ENST00000618207 Q8NBF4 154 aa7.7□□□□□ -1.18
CIITA-212ENST00000618207 RTL8CO15255 209 aa7.7□□□□□ -1.18
CIITA-212ENST00000618207 IGFL1Q6UW32 110 aa7.7□□□□□ -1.18
CIITA-212ENST00000618207 VPS13DQ5THJ4 4388 aa7.69□□□□□ -1.18
CIITA-212ENST00000618207 C1orf134Q5TEV5 83 aa7.67□□□□□ -1.18
CIITA-212ENST00000618207 Q6ZR54 194 aa7.67□□□□□ -1.18
CIITA-212ENST00000618207 SPACA4Q8TDM5 124 aa7.67□□□□□ -1.18
CIITA-212ENST00000618207 A0A087WSZ3 146 aa7.66□□□□□ -1.18
CIITA-212ENST00000618207 IGKV4-1P06312 121 aa7.66□□□□□ -1.18
CIITA-212ENST00000618207 DNAH2Q9P225 4427 aa7.65□□□□□ -1.18
CIITA-212ENST00000618207 IGLV5-52A0A0A0MRZ9 124 aa7.65□□□□□ -1.19
CIITA-212ENST00000618207 Q1T7F1 81 aa7.65□□□□□ -1.19
CIITA-212ENST00000618207 HECTD4Q9Y4D8 3996 aa7.65□□□□□ -1.19
CIITA-212ENST00000618207 C8orf87E5RJ46 101 aa7.64□□□□□ -1.19
CIITA-212ENST00000618207 SPRR4Q96PI1 79 aa7.64□□□□□ -1.19
CIITA-212ENST00000618207 IGLV9-49A0A0B4J1Y8 123 aa7.63□□□□□ -1.19
CIITA-212ENST00000618207 ANAPC11Q9NYG5 84 aa7.62□□□□□ -1.19
CIITA-212ENST00000618207 K7EQZ3 153 aa7.61□□□□□ -1.19
CIITA-212ENST00000618207 NDUFS5O43920 106 aa7.61□□□□□ -1.19
CIITA-212ENST00000618207 PSORS1C2Q9UIG4 136 aa7.61□□□□□ -1.19
CIITA-212ENST00000618207 FRAS1Q86XX4 4008 aa7.61□□□□□ -1.19
CIITA-212ENST00000618207 RPL37AP61513 92 aaKnown RBP7.6□□□□□ -1.19
CIITA-212ENST00000618207 DSCR10P59022 87 aa7.6□□□□□ -1.19
CIITA-212ENST00000618207 H0Y9J4 135 aa7.59□□□□□ -1.19
CIITA-212ENST00000618207 KRTAP13-1Q8IUC0 172 aa7.57□□□□□ -1.2
CIITA-212ENST00000618207 FAM30AQ9NZY2 134 aa7.57□□□□□ -1.2
CIITA-212ENST00000618207 KRTAP10-2P60368 255 aa7.57□□□□□ -1.2
CIITA-212ENST00000618207 TMEM254Q8TBM7 123 aa7.57□□□□□ -1.2
CIITA-212ENST00000618207 PRR26Q8N8Z3 221 aa7.56□□□□□ -1.2
CIITA-212ENST00000618207 DNAH6Q9C0G6 4158 aa7.56□□□□□ -1.2
CIITA-212ENST00000618207 IGLV8-61A0A075B6I0 122 aa7.55□□□□□ -1.2
CIITA-212ENST00000618207 A0A1B0GW54 56 aa7.55□□□□□ -1.2
CIITA-212ENST00000618207 PSPHP1O15172 72 aa7.55□□□□□ -1.2
CIITA-212ENST00000618207 WFDC13Q8IUB5 93 aa7.55□□□□□ -1.2
CIITA-212ENST00000618207 WWC2-AS2Q96NR7 200 aa7.55□□□□□ -1.2
CIITA-212ENST00000618207 hDV103S1A0JD37 113 aa7.54□□□□□ -1.2
CIITA-212ENST00000618207 SPRR1BP22528 89 aa7.54□□□□□ -1.2
CIITA-212ENST00000618207 PLAC8Q9NZF1 115 aa7.53□□□□□ -1.2
CIITA-212ENST00000618207 HYDINQ4G0P3 5121 aa7.52□□□□□ -1.2
CIITA-212ENST00000618207 TRAV22A0A0B4J277 110 aa7.52□□□□□ -1.21
CIITA-212ENST00000618207 DNAH17Q9UFH2 4485 aa7.51□□□□□ -1.21
CIITA-212ENST00000618207 MOBPQ13875 183 aa7.51□□□□□ -1.21
CIITA-212ENST00000618207 A8MU10 97 aa7.51□□□□□ -1.21
CIITA-212ENST00000618207 OCR1Q9BZK8 76 aa7.51□□□□□ -1.21
CIITA-212ENST00000618207 DNAH8Q96JB1 4490 aa7.5□□□□□ -1.21
CIITA-212ENST00000618207 CIRBP-AS1Q8TBR5 109 aa7.5□□□□□ -1.21
CIITA-212ENST00000618207 ZNF861PO60384 105 aa7.49□□□□□ -1.21
CIITA-212ENST00000618207 LCA10Q71F78 164 aa7.48□□□□□ -1.21
CIITA-212ENST00000618207 DNAH11Q96DT5 4516 aa7.48□□□□□ -1.21
CIITA-212ENST00000618207 HCG22E2RYF7 251 aa7.48□□□□□ -1.21
CIITA-212ENST00000618207 ATP11AUNQ6ZP68 121 aa7.47□□□□□ -1.21
CIITA-212ENST00000618207 A8MUN3 132 aa7.47□□□□□ -1.21
CIITA-212ENST00000618207 A6NN06 94 aa7.46□□□□□ -1.22
CIITA-212ENST00000618207 C7orf65Q6ZTY9 151 aa7.46□□□□□ -1.22
CIITA-212ENST00000618207 SPTSSBQ8NFR3 76 aa7.45□□□□□ -1.22
CIITA-212ENST00000618207 IGLV7-43P04211 117 aa7.44□□□□□ -1.22
CIITA-212ENST00000618207 KRTAP10-1P60331 282 aa7.44□□□□□ -1.22
CIITA-212ENST00000618207 C1orf64Q8NEQ6 169 aa7.44□□□□□ -1.22
CIITA-212ENST00000618207 LINC00472Q9H8W2 130 aa7.44□□□□□ -1.22
CIITA-212ENST00000618207 ZNF706Q9Y5V0 76 aaPredicted RBP7.44□□□□□ -1.22
CIITA-212ENST00000618207 DNAH5Q8TE73 4624 aa7.43□□□□□ -1.22
CIITA-212ENST00000618207 Q5VV11 94 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms