RNA–Protein interactions for RNA: ENST00000617585.1

ARHGEF1-223, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-223ENST00000617585 BVES-AS1Q5T3Y7 98 aa12.12□□□□□ -0.47
ARHGEF1-223ENST00000617585 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.11□□□□□ -0.47
ARHGEF1-223ENST00000617585 TCL1BO95988 128 aa12.1□□□□□ -0.47
ARHGEF1-223ENST00000617585 Q6JHZ5 121 aa12.1□□□□□ -0.47
ARHGEF1-223ENST00000617585 PPDPFLQ8WWR9 84 aa12.1□□□□□ -0.47
ARHGEF1-223ENST00000617585 C12orf57Q99622 126 aa12.09□□□□□ -0.47
ARHGEF1-223ENST00000617585 PCOTHQ58A44 107 aa12.08□□□□□ -0.48
ARHGEF1-223ENST00000617585 HIGD1BQ9P298 99 aa12.08□□□□□ -0.48
ARHGEF1-223ENST00000617585 CFC1BP0CG36 223 aa12.06□□□□□ -0.48
ARHGEF1-223ENST00000617585 CFC1P0CG37 223 aa12.06□□□□□ -0.48
ARHGEF1-223ENST00000617585 OCIAD2Q56VL3 154 aa12.06□□□□□ -0.48
ARHGEF1-223ENST00000617585 CLEC2BQ92478 149 aa12.06□□□□□ -0.48
ARHGEF1-223ENST00000617585 KRTAP19-2Q3LHN2 52 aa12.04□□□□□ -0.48
ARHGEF1-223ENST00000617585 LCE2CQ5TA81 110 aa12.04□□□□□ -0.48
ARHGEF1-223ENST00000617585 IGFL1Q6UW32 110 aa12.04□□□□□ -0.48
ARHGEF1-223ENST00000617585 C14orf144Q96I85 54 aa12.04□□□□□ -0.48
ARHGEF1-223ENST00000617585 TRBV7-7A0A0K0K1E9 115 aa12.02□□□□□ -0.49
ARHGEF1-223ENST00000617585 A0A0B4J2C4 111 aa12.01□□□□□ -0.49
ARHGEF1-223ENST00000617585 SPATA45Q537H7 98 aa12.01□□□□□ -0.49
ARHGEF1-223ENST00000617585 PAM16Q9Y3D7 125 aa12.01□□□□□ -0.49
ARHGEF1-223ENST00000617585 C2orf91Q6ZV80 131 aa12□□□□□ -0.49
ARHGEF1-223ENST00000617585 RPL37P61927 97 aaKnown RBP11.99□□□□□ -0.49
ARHGEF1-223ENST00000617585 RAB37Q96AX2 223 aa11.98□□□□□ -0.49
ARHGEF1-223ENST00000617585 H0YGX0 51 aa11.97□□□□□ -0.49
ARHGEF1-223ENST00000617585 VAMP8Q9BV40 100 aa11.97□□□□□ -0.49
ARHGEF1-223ENST00000617585 SNHG12Q9BXW3 62 aa11.97□□□□□ -0.49
ARHGEF1-223ENST00000617585 CEND1Q8N111 149 aa11.93□□□□□ -0.5
ARHGEF1-223ENST00000617585 SNCGO76070 127 aa11.92□□□□□ -0.5
ARHGEF1-223ENST00000617585 FAM218AQ96MZ4 157 aa11.92□□□□□ -0.5
ARHGEF1-223ENST00000617585 Q6Q795 121 aa11.91□□□□□ -0.5
ARHGEF1-223ENST00000617585 A0A1B0GX51 115 aa11.9□□□□□ -0.5
ARHGEF1-223ENST00000617585 H3BUT2 72 aa11.89□□□□□ -0.51
ARHGEF1-223ENST00000617585 PRO1854Q9UHT4 67 aa11.88□□□□□ -0.51
ARHGEF1-223ENST00000617585 TMEM238LA0A1B0GVL6 79 aa11.87□□□□□ -0.51
ARHGEF1-223ENST00000617585 A6NJY4 79 aa11.87□□□□□ -0.51
ARHGEF1-223ENST00000617585 MT1HP80294 61 aa11.86□□□□□ -0.51
ARHGEF1-223ENST00000617585 NDUFV3P56181 108 aaKnown RBP11.85□□□□□ -0.51
ARHGEF1-223ENST00000617585 LST1O00453 97 aa11.84□□□□□ -0.51
ARHGEF1-223ENST00000617585 GHRHP01286 108 aa11.84□□□□□ -0.51
ARHGEF1-223ENST00000617585 FXYD2P54710 66 aa11.84□□□□□ -0.51
ARHGEF1-223ENST00000617585 LCE2DQ5TA82 110 aaPredicted RBP11.83□□□□□ -0.52
ARHGEF1-223ENST00000617585 TEN1Q86WV5 123 aa11.83□□□□□ -0.52
ARHGEF1-223ENST00000617585 SS18L2Q9UHA2 77 aa11.82□□□□□ -0.52
ARHGEF1-223ENST00000617585 PYY3Q5JQD4 70 aa11.8□□□□□ -0.52
ARHGEF1-223ENST00000617585 Q75L30 129 aa11.8□□□□□ -0.52
ARHGEF1-223ENST00000617585 TRIAP1O43715 76 aa11.78□□□□□ -0.52
ARHGEF1-223ENST00000617585 OBSCN-AS1Q96MR7 158 aa11.78□□□□□ -0.52
ARHGEF1-223ENST00000617585 H3BMG7 143 aa11.77□□□□□ -0.53
ARHGEF1-223ENST00000617585 KRTAP9-6A0A140TA67 174 aa11.75□□□□□ -0.53
ARHGEF1-223ENST00000617585 HSD52Q0P140 79 aa11.75□□□□□ -0.53
ARHGEF1-223ENST00000617585 FABP2P12104 132 aa11.73□□□□□ -0.53
ARHGEF1-223ENST00000617585 FLGP20930 4061 aaPredicted RBP11.72□□□□□ -0.53
ARHGEF1-223ENST00000617585 A0A087WSZ3 146 aa11.72□□□□□ -0.53
ARHGEF1-223ENST00000617585 Q96NJ1 140 aa11.72□□□□□ -0.53
ARHGEF1-223ENST00000617585 ATP11AUNQ6ZP68 121 aa11.71□□□□□ -0.53
ARHGEF1-223ENST00000617585 A0A1W2PNM2 257 aa11.7□□□□□ -0.54
ARHGEF1-223ENST00000617585 H3BQ85 93 aa11.7□□□□□ -0.54
ARHGEF1-223ENST00000617585 C20orf166-AS1Q96NR2 134 aa11.68□□□□□ -0.54
ARHGEF1-223ENST00000617585 LORP23490 312 aaPredicted RBP11.67□□□□□ -0.54
ARHGEF1-223ENST00000617585 ORMDL1Q9P0S3 153 aa11.67□□□□□ -0.54
ARHGEF1-223ENST00000617585 DNAL4O96015 105 aa11.66□□□□□ -0.54
ARHGEF1-223ENST00000617585 K7ERJ3 54 aa11.65□□□□□ -0.54
ARHGEF1-223ENST00000617585 A8MUU9 505 aa11.64□□□□□ -0.55
ARHGEF1-223ENST00000617585 COX6CP09669 75 aa11.64□□□□□ -0.55
ARHGEF1-223ENST00000617585 KRTAP10-6P60371 365 aaPredicted RBP11.64□□□□□ -0.55
ARHGEF1-223ENST00000617585 UQCR10Q9UDW1 63 aa11.64□□□□□ -0.55
ARHGEF1-223ENST00000617585 TRBV7-4A0A0J9YYF1 115 aa11.63□□□□□ -0.55
ARHGEF1-223ENST00000617585 TMEM256-PLSCR3K7ERE1 68 aa11.63□□□□□ -0.55
ARHGEF1-223ENST00000617585 PSMB2P49721 201 aa11.63□□□□□ -0.55
ARHGEF1-223ENST00000617585 COX6B2Q6YFQ2 88 aa11.63□□□□□ -0.55
ARHGEF1-223ENST00000617585 ANKRD29Q8N6D5 301 aa11.62□□□□□ -0.55
ARHGEF1-223ENST00000617585 UBE2V1Q13404 147 aa11.57□□□□□ -0.56
ARHGEF1-223ENST00000617585 TRACP01848 142 aa11.55□□□□□ -0.56
ARHGEF1-223ENST00000617585 M0R2T5 61 aa11.54□□□□□ -0.56
ARHGEF1-223ENST00000617585 DSCR10P59022 87 aa11.53□□□□□ -0.56
ARHGEF1-223ENST00000617585 TMA7Q9Y2S6 64 aaKnown RBP11.53□□□□□ -0.56
ARHGEF1-223ENST00000617585 LINC00472Q9H8W2 130 aa11.52□□□□□ -0.57
ARHGEF1-223ENST00000617585 FSIP2Q5CZC0 6907 aa11.51□□□□□ -0.57
ARHGEF1-223ENST00000617585 CCKP06307 115 aa11.51□□□□□ -0.57
ARHGEF1-223ENST00000617585 SIGMAR1Q99720 223 aa11.51□□□□□ -0.57
ARHGEF1-223ENST00000617585 IGKV4-1P06312 121 aa11.5□□□□□ -0.57
ARHGEF1-223ENST00000617585 A0A1B0GV72 72 aa11.49□□□□□ -0.57
ARHGEF1-223ENST00000617585 KRTAP16-1A8MUX0 517 aa11.49□□□□□ -0.57
ARHGEF1-223ENST00000617585 LINC00313P59037 77 aa11.49□□□□□ -0.57
ARHGEF1-223ENST00000617585 CRCT1Q9UGL9 99 aa11.47□□□□□ -0.57
ARHGEF1-223ENST00000617585 SCGB1C2P0DMR2 95 aa11.45□□□□□ -0.58
ARHGEF1-223ENST00000617585 RBM3P98179 157 aaKnown RBP11.43□□□□□ -0.58
ARHGEF1-223ENST00000617585 NOTCH2NLQ7Z3S9 236 aa11.42□□□□□ -0.58
ARHGEF1-223ENST00000617585 DEFB116Q30KQ4 102 aa11.41□□□□□ -0.58
ARHGEF1-223ENST00000617585 DSCR8Q96T75 97 aa11.39□□□□□ -0.59
ARHGEF1-223ENST00000617585 TRBV20-1A0A075B6N2 111 aa11.38□□□□□ -0.59
ARHGEF1-223ENST00000617585 BAALC-AS2P0C853 105 aa11.37□□□□□ -0.59
ARHGEF1-223ENST00000617585 C21orf62-AS1Q17RA5 79 aa11.36□□□□□ -0.59
ARHGEF1-223ENST00000617585 IGHV6-1A0A0B4J1U7 121 aa11.34□□□□□ -0.59
ARHGEF1-223ENST00000617585 VPS25Q9BRG1 176 aa11.34□□□□□ -0.59
ARHGEF1-223ENST00000617585 C9JAW5 83 aa11.33□□□□□ -0.6
ARHGEF1-223ENST00000617585 C8orf87E5RJ46 101 aa11.33□□□□□ -0.6
ARHGEF1-223ENST00000617585 M0R143 59 aa11.33□□□□□ -0.6
ARHGEF1-223ENST00000617585 A0A1B0GVX0 72 aa11.32□□□□□ -0.6
ARHGEF1-223ENST00000617585 J3KT08 172 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms