RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 DNAH8Q96JB1 4490 aa12.92□□□□□ -0.34
CNTNAP3B-212ENST00000617422 REG3GQ6UW15 175 aa12.92□□□□□ -0.34
CNTNAP3B-212ENST00000617422 ETDCA0A1B0GVM5 59 aa12.91□□□□□ -0.34
CNTNAP3B-212ENST00000617422 LINC00474Q9P2X8 69 aa12.91□□□□□ -0.34
CNTNAP3B-212ENST00000617422 PKIGQ9Y2B9 76 aa12.9□□□□□ -0.34
CNTNAP3B-212ENST00000617422 IGLV5-52A0A0A0MRZ9 124 aa12.88□□□□□ -0.35
CNTNAP3B-212ENST00000617422 KLKP1Q107X0 134 aa12.88□□□□□ -0.35
CNTNAP3B-212ENST00000617422 ERC2-IT1O76042 136 aa12.87□□□□□ -0.35
CNTNAP3B-212ENST00000617422 KRTAP10-2P60368 255 aa12.87□□□□□ -0.35
CNTNAP3B-212ENST00000617422 FAM236DA0A1B0GTK5 79 aa12.87□□□□□ -0.35
CNTNAP3B-212ENST00000617422 EPM2AB3EWF7 344 aa12.87□□□□□ -0.35
CNTNAP3B-212ENST00000617422 FAM236CP0DP71 79 aa12.87□□□□□ -0.35
CNTNAP3B-212ENST00000617422 SRRM2Q9UQ35 2752 aaKnown RBP12.86□□□□□ -0.35
CNTNAP3B-212ENST00000617422 H7BZZ5 65 aa12.84□□□□□ -0.35
CNTNAP3B-212ENST00000617422 OXTP01178 125 aa12.84□□□□□ -0.35
CNTNAP3B-212ENST00000617422 UBE2BP63146 152 aa12.84□□□□□ -0.35
CNTNAP3B-212ENST00000617422 DHRS4-AS1Q9P1J3 65 aa12.84□□□□□ -0.35
CNTNAP3B-212ENST00000617422 PRLHP81277 87 aa12.83□□□□□ -0.36
CNTNAP3B-212ENST00000617422 ST20-AS1Q8NBB2 130 aa12.83□□□□□ -0.36
CNTNAP3B-212ENST00000617422 DEFB105AQ8NG35 78 aa12.83□□□□□ -0.36
CNTNAP3B-212ENST00000617422 SCXQ7RTU7 201 aa12.83□□□□□ -0.36
CNTNAP3B-212ENST00000617422 C5orf47Q569G3 176 aa12.82□□□□□ -0.36
CNTNAP3B-212ENST00000617422 Q8N377 158 aa12.81□□□□□ -0.36
CNTNAP3B-212ENST00000617422 NDUFC1O43677 76 aa12.8□□□□□ -0.36
CNTNAP3B-212ENST00000617422 NREPQ16612 68 aa12.79□□□□□ -0.36
CNTNAP3B-212ENST00000617422 SERP1Q9Y6X1 66 aa12.78□□□□□ -0.36
CNTNAP3B-212ENST00000617422 PLAC8Q9NZF1 115 aa12.77□□□□□ -0.37
CNTNAP3B-212ENST00000617422 A0A1B0GW54 56 aa12.76□□□□□ -0.37
CNTNAP3B-212ENST00000617422 IGLV5-48A0A075B6I7 105 aa12.76□□□□□ -0.37
CNTNAP3B-212ENST00000617422 BPY2O14599 106 aa12.76□□□□□ -0.37
CNTNAP3B-212ENST00000617422 SNURFQ9Y675 71 aa12.75□□□□□ -0.37
CNTNAP3B-212ENST00000617422 FAM30AQ9NZY2 134 aa12.74□□□□□ -0.37
CNTNAP3B-212ENST00000617422 KMT2CQ8NEZ4 4911 aaKnown RBP12.74□□□□□ -0.37
CNTNAP3B-212ENST00000617422 LCE6AA0A183 80 aa12.73□□□□□ -0.37
CNTNAP3B-212ENST00000617422 IGKV4-1P06312 121 aa12.73□□□□□ -0.37
CNTNAP3B-212ENST00000617422 HIGD2AQ9BW72 106 aa12.73□□□□□ -0.37
CNTNAP3B-212ENST00000617422 RYR2Q92736 4967 aa12.73□□□□□ -0.37
CNTNAP3B-212ENST00000617422 Q5XG85 94 aa12.72□□□□□ -0.37
CNTNAP3B-212ENST00000617422 PKHD1P08F94 4074 aa12.71□□□□□ -0.37
CNTNAP3B-212ENST00000617422 F8WEM9 126 aa12.71□□□□□ -0.37
CNTNAP3B-212ENST00000617422 ATP5EP56381 51 aaPredicted RBP12.7□□□□□ -0.38
CNTNAP3B-212ENST00000617422 KRTAP13-1Q8IUC0 172 aa12.7□□□□□ -0.38
CNTNAP3B-212ENST00000617422 H0Y9J4 135 aa12.69□□□□□ -0.38
CNTNAP3B-212ENST00000617422 KRTAP10-1P60331 282 aa12.69□□□□□ -0.38
CNTNAP3B-212ENST00000617422 TMEM254Q8TBM7 123 aa12.67□□□□□ -0.38
CNTNAP3B-212ENST00000617422 Q8N9L7 120 aa12.67□□□□□ -0.38
CNTNAP3B-212ENST00000617422 UBE2AP49459 152 aa12.66□□□□□ -0.38
CNTNAP3B-212ENST00000617422 SMIM29Q86T20 159 aa12.66□□□□□ -0.38
CNTNAP3B-212ENST00000617422 PSORS1C2Q9UIG4 136 aa12.66□□□□□ -0.38
CNTNAP3B-212ENST00000617422 C4orf26Q17RF5 130 aa12.66□□□□□ -0.38
CNTNAP3B-212ENST00000617422 OCR1Q9BZK8 76 aa12.64□□□□□ -0.39
CNTNAP3B-212ENST00000617422 LRP1BQ9NZR2 4599 aa12.64□□□□□ -0.39
CNTNAP3B-212ENST00000617422 CIRBP-AS1Q8TBR5 109 aa12.64□□□□□ -0.39
CNTNAP3B-212ENST00000617422 Q6ZSA8 131 aa12.63□□□□□ -0.39
CNTNAP3B-212ENST00000617422 C1orf137Q5JT78 98 aa12.61□□□□□ -0.39
CNTNAP3B-212ENST00000617422 A0A1W2PNM2 257 aa12.6□□□□□ -0.39
CNTNAP3B-212ENST00000617422 Q8NBF4 154 aa12.6□□□□□ -0.39
CNTNAP3B-212ENST00000617422 HRCT1Q6UXD1 115 aa12.59□□□□□ -0.39
CNTNAP3B-212ENST00000617422 SMIM26A0A096LP01 95 aa12.59□□□□□ -0.39
CNTNAP3B-212ENST00000617422 A0A0U1RQV1 116 aa12.58□□□□□ -0.4
CNTNAP3B-212ENST00000617422 SPRR4Q96PI1 79 aa12.57□□□□□ -0.4
CNTNAP3B-212ENST00000617422 A0A0G2JQZ4 141 aa12.54□□□□□ -0.4
CNTNAP3B-212ENST00000617422 DYNC1H1Q14204 4646 aaKnown RBP12.54□□□□□ -0.4
CNTNAP3B-212ENST00000617422 SPRR1BP22528 89 aa12.53□□□□□ -0.4
CNTNAP3B-212ENST00000617422 LINC00336Q6ZUF6 198 aa12.5□□□□□ -0.41
CNTNAP3B-212ENST00000617422 A0A1B0GVY2 172 aa12.49□□□□□ -0.41
CNTNAP3B-212ENST00000617422 ZNF861PO60384 105 aa12.49□□□□□ -0.41
CNTNAP3B-212ENST00000617422 VPS13BQ7Z7G8 4022 aa12.47□□□□□ -0.41
CNTNAP3B-212ENST00000617422 IGLV7-43P04211 117 aa12.47□□□□□ -0.41
CNTNAP3B-212ENST00000617422 IGLV8-61A0A075B6I0 122 aa12.46□□□□□ -0.41
CNTNAP3B-212ENST00000617422 IGFL1Q6UW32 110 aa12.46□□□□□ -0.41
CNTNAP3B-212ENST00000617422 FP248Q71RG6 208 aaPredicted RBP12.46□□□□□ -0.41
CNTNAP3B-212ENST00000617422 RYR3Q15413 4870 aa12.46□□□□□ -0.42
CNTNAP3B-212ENST00000617422 DSCR10P59022 87 aa12.45□□□□□ -0.42
CNTNAP3B-212ENST00000617422 LINC00483Q53H64 154 aa12.42□□□□□ -0.42
CNTNAP3B-212ENST00000617422 ANAPC11Q9NYG5 84 aa12.42□□□□□ -0.42
CNTNAP3B-212ENST00000617422 K7EQZ3 153 aa12.4□□□□□ -0.42
CNTNAP3B-212ENST00000617422 APOBP04114 4563 aaKnown RBP12.39□□□□□ -0.43
CNTNAP3B-212ENST00000617422 HCG22E2RYF7 251 aa12.36□□□□□ -0.43
CNTNAP3B-212ENST00000617422 IGLV9-49A0A0B4J1Y8 123 aa12.35□□□□□ -0.43
CNTNAP3B-212ENST00000617422 ZNF706Q9Y5V0 76 aaPredicted RBP12.35□□□□□ -0.43
CNTNAP3B-212ENST00000617422 ZCCHC13Q8WW36 166 aaKnown RBP12.34□□□□□ -0.43
CNTNAP3B-212ENST00000617422 PRO0628Q9UI54 55 aa12.32□□□□□ -0.44
CNTNAP3B-212ENST00000617422 FAM229BQ4G0N7 80 aa12.29□□□□□ -0.44
CNTNAP3B-212ENST00000617422 FAT1Q14517 4588 aa12.27□□□□□ -0.44
CNTNAP3B-212ENST00000617422 A0A087WSZ3 146 aa12.27□□□□□ -0.45
CNTNAP3B-212ENST00000617422 MOBPQ13875 183 aa12.26□□□□□ -0.45
CNTNAP3B-212ENST00000617422 hDV103S1A0JD37 113 aa12.24□□□□□ -0.45
CNTNAP3B-212ENST00000617422 SMR3BP02814 79 aaPredicted RBP12.23□□□□□ -0.45
CNTNAP3B-212ENST00000617422 NDUFB1O75438 58 aa12.23□□□□□ -0.45
CNTNAP3B-212ENST00000617422 MPLKIPQ8TAP9 179 aa12.22□□□□□ -0.45
CNTNAP3B-212ENST00000617422 MP68P56378 58 aa12.2□□□□□ -0.46
CNTNAP3B-212ENST00000617422 DEFB116Q30KQ4 102 aa12.2□□□□□ -0.46
CNTNAP3B-212ENST00000617422 CYP4F30PQ9H0H9 118 aa12.19□□□□□ -0.46
CNTNAP3B-212ENST00000617422 WFDC13Q8IUB5 93 aa12.19□□□□□ -0.46
CNTNAP3B-212ENST00000617422 A0A087X002 238 aa12.18□□□□□ -0.46
CNTNAP3B-212ENST00000617422 C1orf64Q8NEQ6 169 aa12.18□□□□□ -0.46
CNTNAP3B-212ENST00000617422 KRTAP29-1A8MX34 341 aaPredicted RBP12.17□□□□□ -0.46
CNTNAP3B-212ENST00000617422 KRTAP1-4P0C5Y4 121 aa12.17□□□□□ -0.46
CNTNAP3B-212ENST00000617422 RPL37AP61513 92 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms