RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 FAM218AQ96MZ4 157 aa10.67□□□□□ -0.7
TRAPPC3-209ENST00000616395 DHRS4-AS1Q9P1J3 65 aa10.67□□□□□ -0.7
TRAPPC3-209ENST00000616395 RPL37AP8A6NKH3 93 aa10.66□□□□□ -0.7
TRAPPC3-209ENST00000616395 TMEM256-PLSCR3K7ERE1 68 aa10.66□□□□□ -0.7
TRAPPC3-209ENST00000616395 PRR26Q8N8Z3 221 aa10.66□□□□□ -0.7
TRAPPC3-209ENST00000616395 PPDPFLQ8WWR9 84 aa10.65□□□□□ -0.7
TRAPPC3-209ENST00000616395 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC3-209ENST00000616395 SMCPP49901 116 aaPredicted RBP10.63□□□□□ -0.71
TRAPPC3-209ENST00000616395 SPRR1AP35321 89 aa10.6□□□□□ -0.71
TRAPPC3-209ENST00000616395 PHF5AQ7RTV0 110 aaKnown RBP10.6□□□□□ -0.71
TRAPPC3-209ENST00000616395 FSIP2Q5CZC0 6907 aa10.59□□□□□ -0.71
TRAPPC3-209ENST00000616395 Q6ZRX8 168 aa10.59□□□□□ -0.71
TRAPPC3-209ENST00000616395 JMJD7-PLA2G4BH0Y9G9 81 aa10.58□□□□□ -0.71
TRAPPC3-209ENST00000616395 KRTAP7-1Q8IUC3 87 aa10.58□□□□□ -0.71
TRAPPC3-209ENST00000616395 B5MCH6 92 aa10.58□□□□□ -0.72
TRAPPC3-209ENST00000616395 Q6ZQY7 126 aa10.58□□□□□ -0.72
TRAPPC3-209ENST00000616395 FAM19A1Q7Z5A9 133 aa10.57□□□□□ -0.72
TRAPPC3-209ENST00000616395 C21orf62-AS1Q17RA5 79 aa10.56□□□□□ -0.72
TRAPPC3-209ENST00000616395 KRTAP11-1Q8IUC1 163 aa10.55□□□□□ -0.72
TRAPPC3-209ENST00000616395 UBE2AP49459 152 aa10.54□□□□□ -0.72
TRAPPC3-209ENST00000616395 C1orf137Q5JT78 98 aa10.54□□□□□ -0.72
TRAPPC3-209ENST00000616395 LAMTOR3Q9UHA4 124 aa10.54□□□□□ -0.72
TRAPPC3-209ENST00000616395 KRTAP4-16G5E9R7 235 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC3-209ENST00000616395 H0Y9J4 135 aa10.53□□□□□ -0.72
TRAPPC3-209ENST00000616395 TEX49A0A1B0GTD5 131 aa10.51□□□□□ -0.73
TRAPPC3-209ENST00000616395 BCE1O60756 84 aa10.51□□□□□ -0.73
TRAPPC3-209ENST00000616395 CRCT1Q9UGL9 99 aa10.51□□□□□ -0.73
TRAPPC3-209ENST00000616395 ACYP1P07311 99 aa10.48□□□□□ -0.73
TRAPPC3-209ENST00000616395 PDE6GP18545 87 aa10.48□□□□□ -0.73
TRAPPC3-209ENST00000616395 IGLV7-43P04211 117 aa10.47□□□□□ -0.73
TRAPPC3-209ENST00000616395 RBM3P98179 157 aaKnown RBP10.47□□□□□ -0.73
TRAPPC3-209ENST00000616395 KRTAP1-4P0C5Y4 121 aa10.46□□□□□ -0.73
TRAPPC3-209ENST00000616395 DSCR8Q96T75 97 aa10.46□□□□□ -0.73
TRAPPC3-209ENST00000616395 HIGD2AQ9BW72 106 aa10.46□□□□□ -0.73
TRAPPC3-209ENST00000616395 Q9BRP9 147 aa10.45□□□□□ -0.74
TRAPPC3-209ENST00000616395 F8WEM9 126 aa10.44□□□□□ -0.74
TRAPPC3-209ENST00000616395 NDUFV3P56181 108 aaKnown RBP10.44□□□□□ -0.74
TRAPPC3-209ENST00000616395 DEFB105AQ8NG35 78 aa10.44□□□□□ -0.74
TRAPPC3-209ENST00000616395 VPS25Q9BRG1 176 aa10.44□□□□□ -0.74
TRAPPC3-209ENST00000616395 PRLHP81277 87 aa10.43□□□□□ -0.74
TRAPPC3-209ENST00000616395 SMCR5Q8TEV8 140 aa10.43□□□□□ -0.74
TRAPPC3-209ENST00000616395 OBSCN-AS1Q96MR7 158 aa10.43□□□□□ -0.74
TRAPPC3-209ENST00000616395 ZNF706Q9Y5V0 76 aaPredicted RBP10.43□□□□□ -0.74
TRAPPC3-209ENST00000616395 FAM240AA0A1B0GVK7 77 aa10.42□□□□□ -0.74
TRAPPC3-209ENST00000616395 IGLV5-48A0A075B6I7 105 aa10.41□□□□□ -0.74
TRAPPC3-209ENST00000616395 C14orf132Q9NPU4 83 aa10.4□□□□□ -0.74
TRAPPC3-209ENST00000616395 GAGE2AQ6NT46 116 aa10.39□□□□□ -0.75
TRAPPC3-209ENST00000616395 LOC110117498A0A087WWA1 95 aa10.37□□□□□ -0.75
TRAPPC3-209ENST00000616395 Q8N377 158 aa10.37□□□□□ -0.75
TRAPPC3-209ENST00000616395 CCKP06307 115 aa10.36□□□□□ -0.75
TRAPPC3-209ENST00000616395 A0A1B0GV72 72 aa10.35□□□□□ -0.75
TRAPPC3-209ENST00000616395 ERC2-IT1O76042 136 aa10.34□□□□□ -0.75
TRAPPC3-209ENST00000616395 ZNF861PO60384 105 aa10.33□□□□□ -0.76
TRAPPC3-209ENST00000616395 ST20-AS1Q8NBB2 130 aa10.33□□□□□ -0.76
TRAPPC3-209ENST00000616395 MUC17Q685J3 4493 aa10.32□□□□□ -0.76
TRAPPC3-209ENST00000616395 LINC01547P58512 204 aaPredicted RBP10.32□□□□□ -0.76
TRAPPC3-209ENST00000616395 KRTAP13-1Q8IUC0 172 aa10.32□□□□□ -0.76
TRAPPC3-209ENST00000616395 SPRR1BP22528 89 aa10.31□□□□□ -0.76
TRAPPC3-209ENST00000616395 TRBV7-4A0A0J9YYF1 115 aa10.3□□□□□ -0.76
TRAPPC3-209ENST00000616395 A0A1B0GW54 56 aa10.3□□□□□ -0.76
TRAPPC3-209ENST00000616395 Q6ZQT0 140 aa10.3□□□□□ -0.76
TRAPPC3-209ENST00000616395 Q6JHZ5 121 aa10.27□□□□□ -0.77
TRAPPC3-209ENST00000616395 UBL5Q9BZL1 73 aa10.27□□□□□ -0.77
TRAPPC3-209ENST00000616395 CDIP1Q9H305 208 aa10.27□□□□□ -0.77
TRAPPC3-209ENST00000616395 SIGMAR1Q99720 223 aa10.26□□□□□ -0.77
TRAPPC3-209ENST00000616395 SPRR4Q96PI1 79 aa10.25□□□□□ -0.77
TRAPPC3-209ENST00000616395 RETNLBQ9BQ08 111 aa10.24□□□□□ -0.77
TRAPPC3-209ENST00000616395 LINC00643Q86TS7 51 aa10.23□□□□□ -0.77
TRAPPC3-209ENST00000616395 IGLV8-61A0A075B6I0 122 aa10.22□□□□□ -0.77
TRAPPC3-209ENST00000616395 C3orf22Q8N5N4 141 aa10.22□□□□□ -0.77
TRAPPC3-209ENST00000616395 SMIM29Q86T20 159 aa10.21□□□□□ -0.78
TRAPPC3-209ENST00000616395 A0A087X002 238 aa10.2□□□□□ -0.78
TRAPPC3-209ENST00000616395 TPRXLQ17RH7 258 aa10.2□□□□□ -0.78
TRAPPC3-209ENST00000616395 LINC00483Q53H64 154 aa10.2□□□□□ -0.78
TRAPPC3-209ENST00000616395 TYMSOSQ8TAI1 123 aa10.18□□□□□ -0.78
TRAPPC3-209ENST00000616395 C9orf153Q5TBE3 101 aa10.17□□□□□ -0.78
TRAPPC3-209ENST00000616395 ATP5EP2Q5VTU8 51 aa10.17□□□□□ -0.78
TRAPPC3-209ENST00000616395 Q8NBF4 154 aa10.17□□□□□ -0.78
TRAPPC3-209ENST00000616395 LINC00846Q9NV44 126 aa10.17□□□□□ -0.78
TRAPPC3-209ENST00000616395 ANAPC11Q9NYG5 84 aa10.15□□□□□ -0.78
TRAPPC3-209ENST00000616395 IGLV7-46A0A075B6I9 117 aa10.14□□□□□ -0.79
TRAPPC3-209ENST00000616395 CRYGAP11844 174 aa10.13□□□□□ -0.79
TRAPPC3-209ENST00000616395 NREPQ16612 68 aa10.13□□□□□ -0.79
TRAPPC3-209ENST00000616395 IGLV9-49A0A0B4J1Y8 123 aa10.12□□□□□ -0.79
TRAPPC3-209ENST00000616395 IGFL1Q6UW32 110 aa10.12□□□□□ -0.79
TRAPPC3-209ENST00000616395 IMUPQ9GZP8 106 aa10.12□□□□□ -0.79
TRAPPC3-209ENST00000616395 FAM229BQ4G0N7 80 aa10.1□□□□□ -0.79
TRAPPC3-209ENST00000616395 Q6Q795 121 aa10.09□□□□□ -0.79
TRAPPC3-209ENST00000616395 Q6ZVQ6 151 aa10.08□□□□□ -0.8
TRAPPC3-209ENST00000616395 A0A1W2PNM2 257 aa10.07□□□□□ -0.8
TRAPPC3-209ENST00000616395 MT-ATP8P03928 68 aa10.07□□□□□ -0.8
TRAPPC3-209ENST00000616395 SSBP3-AS1Q7Z2R9 100 aa10.07□□□□□ -0.8
TRAPPC3-209ENST00000616395 TRBV7-7A0A0K0K1E9 115 aa10.07□□□□□ -0.8
TRAPPC3-209ENST00000616395 SCGB1A1P11684 91 aa10.07□□□□□ -0.8
TRAPPC3-209ENST00000616395 MOBPQ13875 183 aa10.07□□□□□ -0.8
TRAPPC3-209ENST00000616395 KRTAP13-2Q52LG2 175 aa10.07□□□□□ -0.8
TRAPPC3-209ENST00000616395 LINC00304Q8N9R0 145 aa10.06□□□□□ -0.8
TRAPPC3-209ENST00000616395 KRTAP4-1Q9BYQ7 146 aa10.06□□□□□ -0.8
TRAPPC3-209ENST00000616395 SS18L2Q9UHA2 77 aa10.06□□□□□ -0.8
TRAPPC3-209ENST00000616395 CXCL6P80162 114 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 188.7 ms