RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 A0A087WSZ3 146 aa6.73□□□□□ -1.33
TNFAIP3-208ENST00000615468 PCOTHQ58A44 107 aa6.72□□□□□ -1.33
TNFAIP3-208ENST00000615468 C7orf65Q6ZTY9 151 aa6.72□□□□□ -1.33
TNFAIP3-208ENST00000615468 COA5Q86WW8 74 aa6.71□□□□□ -1.33
TNFAIP3-208ENST00000615468 A0A1B0GW54 56 aa6.71□□□□□ -1.34
TNFAIP3-208ENST00000615468 SERTAD4-AS1Q5TG53 156 aa6.71□□□□□ -1.34
TNFAIP3-208ENST00000615468 CASC2Q6XLA1 102 aa6.71□□□□□ -1.34
TNFAIP3-208ENST00000615468 PRR34Q9NV39 138 aa6.7□□□□□ -1.34
TNFAIP3-208ENST00000615468 Q6ZRX8 168 aa6.7□□□□□ -1.34
TNFAIP3-208ENST00000615468 LOC101927531A0A1B0GV80 90 aa6.7□□□□□ -1.34
TNFAIP3-208ENST00000615468 KCNQ1DNQ9H478 68 aa6.7□□□□□ -1.34
TNFAIP3-208ENST00000615468 PKD1L1Q8TDX9 2849 aa6.7□□□□□ -1.34
TNFAIP3-208ENST00000615468 KRTAP24-1Q3LI83 254 aa6.69□□□□□ -1.34
TNFAIP3-208ENST00000615468 Q75L30 129 aa6.69□□□□□ -1.34
TNFAIP3-208ENST00000615468 CDC42SE1Q9NRR8 79 aa6.69□□□□□ -1.34
TNFAIP3-208ENST00000615468 A6NN06 94 aa6.68□□□□□ -1.34
TNFAIP3-208ENST00000615468 LINC00476Q8WZB0 136 aa6.68□□□□□ -1.34
TNFAIP3-208ENST00000615468 Q9BRP9 147 aa6.68□□□□□ -1.34
TNFAIP3-208ENST00000615468 SPART-AS1P0CW21 52 aa6.68□□□□□ -1.34
TNFAIP3-208ENST00000615468 PHF5AQ7RTV0 110 aaKnown RBP6.67□□□□□ -1.34
TNFAIP3-208ENST00000615468 H0Y9J4 135 aa6.67□□□□□ -1.34
TNFAIP3-208ENST00000615468 SPRR4Q96PI1 79 aa6.67□□□□□ -1.34
TNFAIP3-208ENST00000615468 SPANXA2-OT1Q8N9U9 137 aa6.67□□□□□ -1.34
TNFAIP3-208ENST00000615468 FAM168BA1KXE4 195 aa6.66□□□□□ -1.34
TNFAIP3-208ENST00000615468 MOBPQ13875 183 aa6.66□□□□□ -1.34
TNFAIP3-208ENST00000615468 C15orf56Q8N910 161 aa6.65□□□□□ -1.34
TNFAIP3-208ENST00000615468 A0A096LNI7 61 aa6.65□□□□□ -1.35
TNFAIP3-208ENST00000615468 PRAC1Q96KF2 57 aa6.64□□□□□ -1.35
TNFAIP3-208ENST00000615468 C8orf87E5RJ46 101 aa6.64□□□□□ -1.35
TNFAIP3-208ENST00000615468 TNP2Q05952 138 aa6.63□□□□□ -1.35
TNFAIP3-208ENST00000615468 IGFL1Q6UW32 110 aa6.63□□□□□ -1.35
TNFAIP3-208ENST00000615468 SPINK7P58062 85 aa6.62□□□□□ -1.35
TNFAIP3-208ENST00000615468 TENM3Q9P273 2699 aa6.61□□□□□ -1.35
TNFAIP3-208ENST00000615468 H3BPC8 53 aa6.61□□□□□ -1.35
TNFAIP3-208ENST00000615468 H3BS24 57 aa6.61□□□□□ -1.35
TNFAIP3-208ENST00000615468 KRTAP10-11P60412 298 aa6.6□□□□□ -1.35
TNFAIP3-208ENST00000615468 IGLV1-50A0A075B6I6 118 aa6.59□□□□□ -1.35
TNFAIP3-208ENST00000615468 PRLHP81277 87 aa6.59□□□□□ -1.35
TNFAIP3-208ENST00000615468 LINC00313P59037 77 aa6.58□□□□□ -1.36
TNFAIP3-208ENST00000615468 MDFIQ99750 246 aa6.58□□□□□ -1.36
TNFAIP3-208ENST00000615468 REG3GQ6UW15 175 aa6.56□□□□□ -1.36
TNFAIP3-208ENST00000615468 IGLV7-46A0A075B6I9 117 aa6.56□□□□□ -1.36
TNFAIP3-208ENST00000615468 C9orf163Q8N9P6 203 aa6.56□□□□□ -1.36
TNFAIP3-208ENST00000615468 KRTAP29-1A8MX34 341 aaPredicted RBP6.55□□□□□ -1.36
TNFAIP3-208ENST00000615468 CNBPP62633 177 aaKnown RBP6.55□□□□□ -1.36
TNFAIP3-208ENST00000615468 Q8NAQ8 132 aa6.55□□□□□ -1.36
TNFAIP3-208ENST00000615468 LINC01558Q9Y6Z2 57 aa6.55□□□□□ -1.36
TNFAIP3-208ENST00000615468 IGKV2-24A0A0C4DH68 120 aa6.55□□□□□ -1.36
TNFAIP3-208ENST00000615468 A8MWP4 228 aa6.53□□□□□ -1.36
TNFAIP3-208ENST00000615468 ADM2Q7Z4H4 148 aa6.53□□□□□ -1.36
TNFAIP3-208ENST00000615468 KRTAP4-16G5E9R7 235 aaPredicted RBP6.53□□□□□ -1.36
TNFAIP3-208ENST00000615468 KRTAP26-1Q6PEX3 210 aa6.53□□□□□ -1.36
TNFAIP3-208ENST00000615468 STAB2Q8WWQ8 2551 aa6.52□□□□□ -1.37
TNFAIP3-208ENST00000615468 PRR26Q8N8Z3 221 aa6.51□□□□□ -1.37
TNFAIP3-208ENST00000615468 DEFB131BA0A096LNP1 70 aa6.5□□□□□ -1.37
TNFAIP3-208ENST00000615468 SPRR1AP35321 89 aa6.5□□□□□ -1.37
TNFAIP3-208ENST00000615468 LINC01554Q52M75 96 aa6.5□□□□□ -1.37
TNFAIP3-208ENST00000615468 HRES1P13985 223 aa6.48□□□□□ -1.37
TNFAIP3-208ENST00000615468 CDK2AP2O75956 126 aa6.46□□□□□ -1.37
TNFAIP3-208ENST00000615468 CASC10Q5T4H9 136 aa6.46□□□□□ -1.37
TNFAIP3-208ENST00000615468 IGHV6-1A0A0B4J1U7 121 aa6.46□□□□□ -1.38
TNFAIP3-208ENST00000615468 SRRM2Q9UQ35 2752 aaKnown RBP6.46□□□□□ -1.38
TNFAIP3-208ENST00000615468 IGLV5-37A0A075B6J1 123 aa6.45□□□□□ -1.38
TNFAIP3-208ENST00000615468 PLA2G2DQ9UNK4 145 aa6.45□□□□□ -1.38
TNFAIP3-208ENST00000615468 MMP24-AS1A0A0U1RRL7 71 aa6.45□□□□□ -1.38
TNFAIP3-208ENST00000615468 LINC01556Q5JQF7 62 aa6.44□□□□□ -1.38
TNFAIP3-208ENST00000615468 KRTAP7-1Q8IUC3 87 aa6.44□□□□□ -1.38
TNFAIP3-208ENST00000615468 TLX1NBP0CAT3 122 aa6.43□□□□□ -1.38
TNFAIP3-208ENST00000615468 LINC00472Q9H8W2 130 aa6.43□□□□□ -1.38
TNFAIP3-208ENST00000615468 TP53AIP1Q9HCN2 124 aa6.43□□□□□ -1.38
TNFAIP3-208ENST00000615468 K7EIL1 84 aa6.42□□□□□ -1.38
TNFAIP3-208ENST00000615468 TENM2Q9NT68 2774 aa6.41□□□□□ -1.38
TNFAIP3-208ENST00000615468 IGLV9-49A0A0B4J1Y8 123 aa6.41□□□□□ -1.38
TNFAIP3-208ENST00000615468 RETNLBQ9BQ08 111 aa6.4□□□□□ -1.38
TNFAIP3-208ENST00000615468 PLAC8Q9NZF1 115 aa6.4□□□□□ -1.39
TNFAIP3-208ENST00000615468 A0A1B0GU69 56 aa6.39□□□□□ -1.39
TNFAIP3-208ENST00000615468 IGLV8-61A0A075B6I0 122 aa6.38□□□□□ -1.39
TNFAIP3-208ENST00000615468 UBE2DNLQ8IWF7 75 aa6.38□□□□□ -1.39
TNFAIP3-208ENST00000615468 C8orf17Q9NRJ1 99 aa6.38□□□□□ -1.39
TNFAIP3-208ENST00000615468 PLA2G1BP04054 148 aaKnown RBP6.36□□□□□ -1.39
TNFAIP3-208ENST00000615468 H3BNG1 76 aa6.36□□□□□ -1.39
TNFAIP3-208ENST00000615468 CSAG1Q6PB30 78 aa6.36□□□□□ -1.39
TNFAIP3-208ENST00000615468 ACYP2P14621 99 aa6.35□□□□□ -1.39
TNFAIP3-208ENST00000615468 SPINK6Q6UWN8 80 aa6.35□□□□□ -1.39
TNFAIP3-208ENST00000615468 CHTF8P0CG12 524 aa6.33□□□□□ -1.4
TNFAIP3-208ENST00000615468 MRPL34Q9BQ48 92 aaKnown RBP6.33□□□□□ -1.4
TNFAIP3-208ENST00000615468 MIR22HGQ0VDD5 57 aa6.33□□□□□ -1.4
TNFAIP3-208ENST00000615468 DNAH10OSP0CZ25 163 aa6.32□□□□□ -1.4
TNFAIP3-208ENST00000615468 Q6ZR54 194 aa6.31□□□□□ -1.4
TNFAIP3-208ENST00000615468 ANK2Q01484 3957 aa6.3□□□□□ -1.4
TNFAIP3-208ENST00000615468 A0A1B0GVX0 72 aa6.3□□□□□ -1.4
TNFAIP3-208ENST00000615468 UQCR11O14957 56 aa6.29□□□□□ -1.4
TNFAIP3-208ENST00000615468 A0A087X002 238 aa6.27□□□□□ -1.41
TNFAIP3-208ENST00000615468 NOTCH2NLQ7Z3S9 236 aa6.27□□□□□ -1.41
TNFAIP3-208ENST00000615468 KRTAP11-1Q8IUC1 163 aa6.27□□□□□ -1.41
TNFAIP3-208ENST00000615468 TGP01266 2768 aa6.26□□□□□ -1.41
TNFAIP3-208ENST00000615468 RTL8CO15255 209 aa6.25□□□□□ -1.41
TNFAIP3-208ENST00000615468 ZNF706Q9Y5V0 76 aaPredicted RBP6.25□□□□□ -1.41
TNFAIP3-208ENST00000615468 Q5W150 140 aa6.24□□□□□ -1.41
TNFAIP3-208ENST00000615468 SPATA8Q6RVD6 105 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms