RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 ORMDL1Q9P0S3 153 aa6.96□□□□□ -1.3
SLIRP-212ENST00000613856 PRO0461Q9UI25 63 aa6.96□□□□□ -1.3
SLIRP-212ENST00000613856 H3BT86 120 aa6.95□□□□□ -1.3
SLIRP-212ENST00000613856 ERC2-IT1O76042 136 aa6.95□□□□□ -1.3
SLIRP-212ENST00000613856 GHRHP01286 108 aa6.95□□□□□ -1.3
SLIRP-212ENST00000613856 RPL37AP61513 92 aaKnown RBP6.95□□□□□ -1.3
SLIRP-212ENST00000613856 IGLV5-48A0A075B6I7 105 aa6.94□□□□□ -1.3
SLIRP-212ENST00000613856 OXTP01178 125 aa6.94□□□□□ -1.3
SLIRP-212ENST00000613856 PPDPFLQ8WWR9 84 aa6.94□□□□□ -1.3
SLIRP-212ENST00000613856 F8W1H4 67 aa6.93□□□□□ -1.3
SLIRP-212ENST00000613856 MT1HL1P0DM35 61 aa6.93□□□□□ -1.3
SLIRP-212ENST00000613856 LINC01547P58512 204 aaPredicted RBP6.93□□□□□ -1.3
SLIRP-212ENST00000613856 BAALC-AS2P0C853 105 aa6.92□□□□□ -1.3
SLIRP-212ENST00000613856 MTURNQ8N3F0 131 aa6.92□□□□□ -1.3
SLIRP-212ENST00000613856 TMEM256-PLSCR3K7ERE1 68 aa6.91□□□□□ -1.3
SLIRP-212ENST00000613856 LCE2AQ5TA79 106 aaPredicted RBP6.91□□□□□ -1.3
SLIRP-212ENST00000613856 ANKRD29Q8N6D5 301 aa6.91□□□□□ -1.3
SLIRP-212ENST00000613856 ST20-AS1Q8NBB2 130 aa6.91□□□□□ -1.3
SLIRP-212ENST00000613856 ZNF706Q9Y5V0 76 aaPredicted RBP6.91□□□□□ -1.3
SLIRP-212ENST00000613856 SPRR1BP22528 89 aa6.9□□□□□ -1.3
SLIRP-212ENST00000613856 SPRR4Q96PI1 79 aa6.9□□□□□ -1.3
SLIRP-212ENST00000613856 TEX49A0A1B0GTD5 131 aa6.89□□□□□ -1.31
SLIRP-212ENST00000613856 Q8N377 158 aa6.89□□□□□ -1.31
SLIRP-212ENST00000613856 LINC00483Q53H64 154 aa6.88□□□□□ -1.31
SLIRP-212ENST00000613856 SPINK6Q6UWN8 80 aa6.88□□□□□ -1.31
SLIRP-212ENST00000613856 TNXBP22105 4242 aa6.87□□□□□ -1.31
SLIRP-212ENST00000613856 DEFB105AQ8NG35 78 aa6.87□□□□□ -1.31
SLIRP-212ENST00000613856 GAGE2AQ6NT46 116 aa6.85□□□□□ -1.31
SLIRP-212ENST00000613856 SMIM29Q86T20 159 aa6.85□□□□□ -1.31
SLIRP-212ENST00000613856 TEN1Q86WV5 123 aa6.85□□□□□ -1.31
SLIRP-212ENST00000613856 NDUFV3P56181 108 aaKnown RBP6.84□□□□□ -1.31
SLIRP-212ENST00000613856 OBSCN-AS1Q96MR7 158 aa6.84□□□□□ -1.31
SLIRP-212ENST00000613856 JMJD7-PLA2G4BH0Y9G9 81 aa6.83□□□□□ -1.32
SLIRP-212ENST00000613856 ETDBQ3ZM63 59 aa6.83□□□□□ -1.32
SLIRP-212ENST00000613856 LAMTOR3Q9UHA4 124 aa6.83□□□□□ -1.32
SLIRP-212ENST00000613856 FAM229BQ4G0N7 80 aa6.82□□□□□ -1.32
SLIRP-212ENST00000613856 C3orf22Q8N5N4 141 aa6.82□□□□□ -1.32
SLIRP-212ENST00000613856 IGLV8-61A0A075B6I0 122 aa6.81□□□□□ -1.32
SLIRP-212ENST00000613856 F8WEM9 126 aa6.81□□□□□ -1.32
SLIRP-212ENST00000613856 KRTAP1-4P0C5Y4 121 aa6.81□□□□□ -1.32
SLIRP-212ENST00000613856 RBM3P98179 157 aaKnown RBP6.79□□□□□ -1.32
SLIRP-212ENST00000613856 TRBV7-4A0A0J9YYF1 115 aa6.78□□□□□ -1.32
SLIRP-212ENST00000613856 C21orf62-AS1Q17RA5 79 aa6.78□□□□□ -1.32
SLIRP-212ENST00000613856 LOC110117498A0A087WWA1 95 aa6.77□□□□□ -1.33
SLIRP-212ENST00000613856 Q8NBF4 154 aa6.77□□□□□ -1.33
SLIRP-212ENST00000613856 DSCR8Q96T75 97 aa6.77□□□□□ -1.33
SLIRP-212ENST00000613856 ANAPC11Q9NYG5 84 aa6.77□□□□□ -1.33
SLIRP-212ENST00000613856 A0A1B0GV72 72 aa6.76□□□□□ -1.33
SLIRP-212ENST00000613856 PDE6GP18545 87 aa6.76□□□□□ -1.33
SLIRP-212ENST00000613856 Q6JHZ5 121 aa6.76□□□□□ -1.33
SLIRP-212ENST00000613856 C14orf132Q9NPU4 83 aa6.76□□□□□ -1.33
SLIRP-212ENST00000613856 A0A087X002 238 aa6.75□□□□□ -1.33
SLIRP-212ENST00000613856 IGLV9-49A0A0B4J1Y8 123 aa6.75□□□□□ -1.33
SLIRP-212ENST00000613856 CRYGAP11844 174 aa6.75□□□□□ -1.33
SLIRP-212ENST00000613856 C9orf153Q5TBE3 101 aa6.75□□□□□ -1.33
SLIRP-212ENST00000613856 LPAP08519 4548 aa6.74□□□□□ -1.33
SLIRP-212ENST00000613856 MOBPQ13875 183 aa6.74□□□□□ -1.33
SLIRP-212ENST00000613856 Q6ZQT0 140 aa6.74□□□□□ -1.33
SLIRP-212ENST00000613856 KRTAP13-2Q52LG2 175 aa6.73□□□□□ -1.33
SLIRP-212ENST00000613856 IGFL1Q6UW32 110 aa6.73□□□□□ -1.33
SLIRP-212ENST00000613856 KRTAP9-2Q9BYQ4 174 aa6.73□□□□□ -1.33
SLIRP-212ENST00000613856 SSBP3-AS1Q7Z2R9 100 aa6.72□□□□□ -1.33
SLIRP-212ENST00000613856 CCKP06307 115 aa6.71□□□□□ -1.34
SLIRP-212ENST00000613856 J3QR89 54 aa6.7□□□□□ -1.34
SLIRP-212ENST00000613856 Q6Q795 121 aa6.7□□□□□ -1.34
SLIRP-212ENST00000613856 FAM240AA0A1B0GVK7 77 aa6.69□□□□□ -1.34
SLIRP-212ENST00000613856 A0A1B0GW54 56 aa6.69□□□□□ -1.34
SLIRP-212ENST00000613856 A0A1W2PNM2 257 aa6.69□□□□□ -1.34
SLIRP-212ENST00000613856 PRR26Q8N8Z3 221 aa6.68□□□□□ -1.34
SLIRP-212ENST00000613856 TYMSOSQ8TAI1 123 aa6.68□□□□□ -1.34
SLIRP-212ENST00000613856 CD164Q04900 197 aa6.67□□□□□ -1.34
SLIRP-212ENST00000613856 A0A0G2JQZ4 141 aa6.66□□□□□ -1.34
SLIRP-212ENST00000613856 K7ERU9 68 aa6.66□□□□□ -1.34
SLIRP-212ENST00000613856 ACYP1P07311 99 aa6.66□□□□□ -1.34
SLIRP-212ENST00000613856 VPS25Q9BRG1 176 aa6.66□□□□□ -1.34
SLIRP-212ENST00000613856 TRBV7-7A0A0K0K1E9 115 aa6.64□□□□□ -1.35
SLIRP-212ENST00000613856 LCE2CQ5TA81 110 aa6.63□□□□□ -1.35
SLIRP-212ENST00000613856 KRTAP10-8P60410 259 aa6.62□□□□□ -1.35
SLIRP-212ENST00000613856 LINC00304Q8N9R0 145 aa6.62□□□□□ -1.35
SLIRP-212ENST00000613856 KRTAP9-6A0A140TA67 174 aa6.61□□□□□ -1.35
SLIRP-212ENST00000613856 SPAG11AQ6PDA7 123 aa6.61□□□□□ -1.35
SLIRP-212ENST00000613856 A0A087WSZ3 146 aa6.6□□□□□ -1.35
SLIRP-212ENST00000613856 RPS29P62273 56 aaKnown RBP6.6□□□□□ -1.35
SLIRP-212ENST00000613856 Q5XG85 94 aa6.6□□□□□ -1.35
SLIRP-212ENST00000613856 LINC00846Q9NV44 126 aa6.6□□□□□ -1.35
SLIRP-212ENST00000613856 SS18L2Q9UHA2 77 aa6.6□□□□□ -1.35
SLIRP-212ENST00000613856 SPINK1P00995 79 aa6.59□□□□□ -1.35
SLIRP-212ENST00000613856 C4orf48Q5BLP8 95 aa6.59□□□□□ -1.35
SLIRP-212ENST00000613856 HRCT1Q6UXD1 115 aa6.59□□□□□ -1.35
SLIRP-212ENST00000613856 MUC2Q02817 5179 aa6.59□□□□□ -1.35
SLIRP-212ENST00000613856 ASB16-AS1Q495Z4 193 aa6.57□□□□□ -1.36
SLIRP-212ENST00000613856 LIMD2Q9BT23 127 aa6.57□□□□□ -1.36
SLIRP-212ENST00000613856 UBL5Q9BZL1 73 aa6.57□□□□□ -1.36
SLIRP-212ENST00000613856 Q6ZVQ6 151 aa6.56□□□□□ -1.36
SLIRP-212ENST00000613856 LORP23490 312 aaPredicted RBP6.55□□□□□ -1.36
SLIRP-212ENST00000613856 NREPQ16612 68 aa6.55□□□□□ -1.36
SLIRP-212ENST00000613856 CDIP1Q9H305 208 aa6.55□□□□□ -1.36
SLIRP-212ENST00000613856 LINC00643Q86TS7 51 aa6.52□□□□□ -1.37
SLIRP-212ENST00000613856 LINC00472Q9H8W2 130 aa6.52□□□□□ -1.37
SLIRP-212ENST00000613856 FAT4Q6V0I7 4981 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms