RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 MT2AP02795 61 aa11.95□□□□□ -0.5
MMP28-203ENST00000612672 S100A1P23297 94 aa11.95□□□□□ -0.5
MMP28-203ENST00000612672 KRTDAPP60985 99 aa11.94□□□□□ -0.5
MMP28-203ENST00000612672 MACF1Q9UPN3 7388 aaKnown RBP11.93□□□□□ -0.5
MMP28-203ENST00000612672 SYNE2Q8WXH0 6885 aaKnown RBP11.88□□□□□ -0.51
MMP28-203ENST00000612672 TRBV7-7A0A0K0K1E9 115 aa11.88□□□□□ -0.51
MMP28-203ENST00000612672 A6NDN8 102 aa11.88□□□□□ -0.51
MMP28-203ENST00000612672 MT1FP04733 61 aa11.88□□□□□ -0.51
MMP28-203ENST00000612672 C20orf202A1L168 122 aa11.87□□□□□ -0.51
MMP28-203ENST00000612672 IGFL1Q6UW32 110 aa11.86□□□□□ -0.51
MMP28-203ENST00000612672 ATOH7Q8N100 152 aa11.85□□□□□ -0.51
MMP28-203ENST00000612672 SMIM11BQ8TCY0 68 aa11.85□□□□□ -0.51
MMP28-203ENST00000612672 HIST3H2BBQ8N257 126 aa11.84□□□□□ -0.51
MMP28-203ENST00000612672 ANKRD39Q53RE8 183 aa11.83□□□□□ -0.52
MMP28-203ENST00000612672 A4D1N5 150 aa11.82□□□□□ -0.52
MMP28-203ENST00000612672 F8WEM9 126 aa11.82□□□□□ -0.52
MMP28-203ENST00000612672 CLEC2BQ92478 149 aa11.82□□□□□ -0.52
MMP28-203ENST00000612672 Q96NJ1 140 aa11.82□□□□□ -0.52
MMP28-203ENST00000612672 KRTAP9-3Q9BYQ3 159 aa11.82□□□□□ -0.52
MMP28-203ENST00000612672 MUSTN1Q8IVN3 82 aa11.8□□□□□ -0.52
MMP28-203ENST00000612672 HIST1H2BLQ99880 126 aa11.8□□□□□ -0.52
MMP28-203ENST00000612672 NHP2Q9NX24 153 aaKnown RBP11.8□□□□□ -0.52
MMP28-203ENST00000612672 C20orf166-AS1Q96NR2 134 aa11.79□□□□□ -0.52
MMP28-203ENST00000612672 SCGB1D4Q6XE38 83 aa11.78□□□□□ -0.52
MMP28-203ENST00000612672 IFITM1P13164 125 aa11.77□□□□□ -0.53
MMP28-203ENST00000612672 A8MUU9 505 aa11.76□□□□□ -0.53
MMP28-203ENST00000612672 Q6JHZ5 121 aa11.76□□□□□ -0.53
MMP28-203ENST00000612672 Q6ZQY7 126 aa11.76□□□□□ -0.53
MMP28-203ENST00000612672 S100A2P29034 98 aa11.74□□□□□ -0.53
MMP28-203ENST00000612672 LINC00575Q6W349 94 aa11.74□□□□□ -0.53
MMP28-203ENST00000612672 OCIAD2Q56VL3 154 aa11.72□□□□□ -0.53
MMP28-203ENST00000612672 KRTAP16-1A8MUX0 517 aa11.71□□□□□ -0.53
MMP28-203ENST00000612672 S100A6P06703 90 aa11.71□□□□□ -0.53
MMP28-203ENST00000612672 SNRPEP62304 92 aaKnown RBP11.71□□□□□ -0.53
MMP28-203ENST00000612672 TRBV20-1A0A075B6N2 111 aa11.7□□□□□ -0.54
MMP28-203ENST00000612672 TRAV13-2A0A0B4J235 113 aa11.7□□□□□ -0.54
MMP28-203ENST00000612672 LST1O00453 97 aa11.69□□□□□ -0.54
MMP28-203ENST00000612672 COPS9Q8WXC6 57 aa11.69□□□□□ -0.54
MMP28-203ENST00000612672 Q6ZVH6 145 aa11.68□□□□□ -0.54
MMP28-203ENST00000612672 H3BUT2 72 aa11.67□□□□□ -0.54
MMP28-203ENST00000612672 KRTAP10-10P60014 251 aa11.67□□□□□ -0.54
MMP28-203ENST00000612672 hADV29S1A0JD25 119 aa11.66□□□□□ -0.54
MMP28-203ENST00000612672 MPLKIPQ8TAP9 179 aa11.61□□□□□ -0.55
MMP28-203ENST00000612672 DSCR10P59022 87 aa11.6□□□□□ -0.55
MMP28-203ENST00000612672 VAMP3Q15836 100 aa11.6□□□□□ -0.55
MMP28-203ENST00000612672 FAM236DA0A1B0GTK5 79 aa11.59□□□□□ -0.55
MMP28-203ENST00000612672 FAM236CP0DP71 79 aa11.59□□□□□ -0.55
MMP28-203ENST00000612672 HRES1P13985 223 aa11.58□□□□□ -0.56
MMP28-203ENST00000612672 HSBP1L1C9JCN9 74 aa11.57□□□□□ -0.56
MMP28-203ENST00000612672 SCGB1D1O95968 90 aa11.57□□□□□ -0.56
MMP28-203ENST00000612672 KRTAP19-6Q3LI70 58 aa11.56□□□□□ -0.56
MMP28-203ENST00000612672 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.56□□□□□ -0.56
MMP28-203ENST00000612672 SNHG12Q9BXW3 62 aa11.51□□□□□ -0.57
MMP28-203ENST00000612672 SS18L2Q9UHA2 77 aa11.51□□□□□ -0.57
MMP28-203ENST00000612672 PPDPFLQ8WWR9 84 aa11.5□□□□□ -0.57
MMP28-203ENST00000612672 A0A087WSZ3 146 aa11.48□□□□□ -0.57
MMP28-203ENST00000612672 COX8AP10176 69 aa11.46□□□□□ -0.57
MMP28-203ENST00000612672 NOTCH2NLQ7Z3S9 236 aa11.45□□□□□ -0.58
MMP28-203ENST00000612672 TEN1Q86WV5 123 aa11.44□□□□□ -0.58
MMP28-203ENST00000612672 C12orf57Q99622 126 aa11.44□□□□□ -0.58
MMP28-203ENST00000612672 RBM12B-AS1Q9P1G2 102 aa11.44□□□□□ -0.58
MMP28-203ENST00000612672 C14orf144Q96I85 54 aa11.43□□□□□ -0.58
MMP28-203ENST00000612672 PAM16Q9Y3D7 125 aa11.43□□□□□ -0.58
MMP28-203ENST00000612672 SIGMAR1Q99720 223 aa11.41□□□□□ -0.58
MMP28-203ENST00000612672 DLEU1O43261 78 aa11.4□□□□□ -0.58
MMP28-203ENST00000612672 SPATA45Q537H7 98 aa11.4□□□□□ -0.58
MMP28-203ENST00000612672 KRTAP6-3Q3LI67 103 aa11.39□□□□□ -0.59
MMP28-203ENST00000612672 HIST1H4GQ99525 98 aa11.39□□□□□ -0.59
MMP28-203ENST00000612672 BVES-AS1Q5T3Y7 98 aa11.38□□□□□ -0.59
MMP28-203ENST00000612672 LINC00313P59037 77 aa11.36□□□□□ -0.59
MMP28-203ENST00000612672 VAMP8Q9BV40 100 aa11.36□□□□□ -0.59
MMP28-203ENST00000612672 LINC00846Q9NV44 126 aa11.36□□□□□ -0.59
MMP28-203ENST00000612672 NDUFV3P56181 108 aaKnown RBP11.35□□□□□ -0.59
MMP28-203ENST00000612672 C2orf91Q6ZV80 131 aa11.35□□□□□ -0.59
MMP28-203ENST00000612672 FAM218AQ96MZ4 157 aa11.35□□□□□ -0.59
MMP28-203ENST00000612672 TMA7Q9Y2S6 64 aaKnown RBP11.35□□□□□ -0.59
MMP28-203ENST00000612672 A0A1W2PNM2 257 aa11.34□□□□□ -0.59
MMP28-203ENST00000612672 PYY3Q5JQD4 70 aa11.32□□□□□ -0.6
MMP28-203ENST00000612672 HIGD1BQ9P298 99 aa11.31□□□□□ -0.6
MMP28-203ENST00000612672 IGKV4-1P06312 121 aa11.28□□□□□ -0.6
MMP28-203ENST00000612672 H3BMG7 143 aa11.27□□□□□ -0.61
MMP28-203ENST00000612672 DEFB116Q30KQ4 102 aa11.25□□□□□ -0.61
MMP28-203ENST00000612672 NEBP20929 6669 aa11.23□□□□□ -0.61
MMP28-203ENST00000612672 CEND1Q8N111 149 aa11.21□□□□□ -0.61
MMP28-203ENST00000612672 Q8N9P0 234 aaPredicted RBP11.21□□□□□ -0.61
MMP28-203ENST00000612672 A0A0B4J2C4 111 aa11.2□□□□□ -0.62
MMP28-203ENST00000612672 RAB37Q96AX2 223 aa11.2□□□□□ -0.62
MMP28-203ENST00000612672 FXYD2P54710 66 aa11.19□□□□□ -0.62
MMP28-203ENST00000612672 MUC12Q9UKN1 5478 aa11.19□□□□□ -0.62
MMP28-203ENST00000612672 IGHV6-1A0A0B4J1U7 121 aa11.18□□□□□ -0.62
MMP28-203ENST00000612672 LINC00472Q9H8W2 130 aa11.18□□□□□ -0.62
MMP28-203ENST00000612672 FABP2P12104 132 aa11.16□□□□□ -0.62
MMP28-203ENST00000612672 A0A1B0GV72 72 aa11.14□□□□□ -0.63
MMP28-203ENST00000612672 H0YGX0 51 aa11.14□□□□□ -0.63
MMP28-203ENST00000612672 MTURNQ8N3F0 131 aa11.14□□□□□ -0.63
MMP28-203ENST00000612672 A8MWP4 228 aa11.13□□□□□ -0.63
MMP28-203ENST00000612672 SPINK7P58062 85 aa11.12□□□□□ -0.63
MMP28-203ENST00000612672 TRBV7-4A0A0J9YYF1 115 aa11.11□□□□□ -0.63
MMP28-203ENST00000612672 PRO1854Q9UHT4 67 aa11.11□□□□□ -0.63
MMP28-203ENST00000612672 ZCCHC13Q8WW36 166 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms