RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 FAM236CP0DP71 79 aa8.82□□□□□ -1
PCDHGA3-202ENST00000612467 DNAH2Q9P225 4427 aa8.82□□□□□ -1
PCDHGA3-202ENST00000612467 TRAV7A0A075B6U4 112 aa8.82□□□□□ -1
PCDHGA3-202ENST00000612467 LRCOL1A6NCL2 159 aa8.82□□□□□ -1
PCDHGA3-202ENST00000612467 H7BZZ5 65 aa8.82□□□□□ -1
PCDHGA3-202ENST00000612467 VPS13DQ5THJ4 4388 aa8.81□□□□□ -1
PCDHGA3-202ENST00000612467 Q8NBF4 154 aa8.81□□□□□ -1
PCDHGA3-202ENST00000612467 NBDYA0A0U1RRE5 68 aa8.81□□□□□ -1
PCDHGA3-202ENST00000612467 IGFL1Q6UW32 110 aa8.78□□□□□ -1
PCDHGA3-202ENST00000612467 LINC00474Q9P2X8 69 aa8.78□□□□□ -1
PCDHGA3-202ENST00000612467 EPM2AB3EWF7 344 aa8.78□□□□□ -1
PCDHGA3-202ENST00000612467 BCE1O60756 84 aa8.78□□□□□ -1
PCDHGA3-202ENST00000612467 FP248Q71RG6 208 aaPredicted RBP8.78□□□□□ -1
PCDHGA3-202ENST00000612467 Q6ZRN7 208 aaPredicted RBP8.77□□□□□ -1.01
PCDHGA3-202ENST00000612467 PKIGQ9Y2B9 76 aa8.77□□□□□ -1.01
PCDHGA3-202ENST00000612467 C9orf163Q8N9P6 203 aa8.76□□□□□ -1.01
PCDHGA3-202ENST00000612467 FRAS1Q86XX4 4008 aa8.76□□□□□ -1.01
PCDHGA3-202ENST00000612467 HECTD4Q9Y4D8 3996 aa8.76□□□□□ -1.01
PCDHGA3-202ENST00000612467 K7EQZ3 153 aa8.75□□□□□ -1.01
PCDHGA3-202ENST00000612467 DSCR10P59022 87 aa8.75□□□□□ -1.01
PCDHGA3-202ENST00000612467 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.75□□□□□ -1.01
PCDHGA3-202ENST00000612467 F8WEM9 126 aa8.74□□□□□ -1.01
PCDHGA3-202ENST00000612467 SPRR4Q96PI1 79 aa8.74□□□□□ -1.01
PCDHGA3-202ENST00000612467 SERP1Q9Y6X1 66 aa8.74□□□□□ -1.01
PCDHGA3-202ENST00000612467 FAM30AQ9NZY2 134 aa8.74□□□□□ -1.01
PCDHGA3-202ENST00000612467 A0A087WSZ3 146 aa8.73□□□□□ -1.01
PCDHGA3-202ENST00000612467 UBE2AP49459 152 aa8.73□□□□□ -1.01
PCDHGA3-202ENST00000612467 C14orf177Q52M58 125 aa8.72□□□□□ -1.01
PCDHGA3-202ENST00000612467 PRO0628Q9UI54 55 aa8.72□□□□□ -1.01
PCDHGA3-202ENST00000612467 NUPR2A6NF83 97 aa8.72□□□□□ -1.01
PCDHGA3-202ENST00000612467 FBN3Q75N90 2809 aa8.71□□□□□ -1.02
PCDHGA3-202ENST00000612467 RPL37AP61513 92 aaKnown RBP8.71□□□□□ -1.02
PCDHGA3-202ENST00000612467 OCR1Q9BZK8 76 aa8.71□□□□□ -1.02
PCDHGA3-202ENST00000612467 KLKP1Q107X0 134 aa8.7□□□□□ -1.02
PCDHGA3-202ENST00000612467 A0A0U1RQV1 116 aa8.68□□□□□ -1.02
PCDHGA3-202ENST00000612467 TMEM254Q8TBM7 123 aa8.68□□□□□ -1.02
PCDHGA3-202ENST00000612467 DNAH8Q96JB1 4490 aa8.68□□□□□ -1.02
PCDHGA3-202ENST00000612467 FAM229BQ4G0N7 80 aa8.67□□□□□ -1.02
PCDHGA3-202ENST00000612467 DNAH17Q9UFH2 4485 aa8.67□□□□□ -1.02
PCDHGA3-202ENST00000612467 A0A087WTM6 91 aa8.65□□□□□ -1.02
PCDHGA3-202ENST00000612467 KRTAP21-3Q3LHN1 58 aa8.65□□□□□ -1.02
PCDHGA3-202ENST00000612467 SEC61GP60059 68 aa8.65□□□□□ -1.03
PCDHGA3-202ENST00000612467 SMIM26A0A096LP01 95 aa8.64□□□□□ -1.03
PCDHGA3-202ENST00000612467 WFDC13Q8IUB5 93 aa8.64□□□□□ -1.03
PCDHGA3-202ENST00000612467 DNAH6Q9C0G6 4158 aa8.64□□□□□ -1.03
PCDHGA3-202ENST00000612467 BRK1Q8WUW1 75 aa8.64□□□□□ -1.03
PCDHGA3-202ENST00000612467 MPLKIPQ8TAP9 179 aa8.63□□□□□ -1.03
PCDHGA3-202ENST00000612467 SPACA4Q8TDM5 124 aa8.63□□□□□ -1.03
PCDHGA3-202ENST00000612467 ANAPC11Q9NYG5 84 aa8.63□□□□□ -1.03
PCDHGA3-202ENST00000612467 IGLV8-61A0A075B6I0 122 aa8.62□□□□□ -1.03
PCDHGA3-202ENST00000612467 IGLV9-49A0A0B4J1Y8 123 aa8.62□□□□□ -1.03
PCDHGA3-202ENST00000612467 A0A1B0GW54 56 aa8.61□□□□□ -1.03
PCDHGA3-202ENST00000612467 RTL8CO15255 209 aa8.6□□□□□ -1.03
PCDHGA3-202ENST00000612467 KRTAP13-1Q8IUC0 172 aa8.6□□□□□ -1.03
PCDHGA3-202ENST00000612467 H0Y9J4 135 aa8.59□□□□□ -1.03
PCDHGA3-202ENST00000612467 HCG22E2RYF7 251 aa8.58□□□□□ -1.04
PCDHGA3-202ENST00000612467 SPRR1BP22528 89 aa8.58□□□□□ -1.04
PCDHGA3-202ENST00000612467 PSORS1C2Q9UIG4 136 aa8.56□□□□□ -1.04
PCDHGA3-202ENST00000612467 DNAH11Q96DT5 4516 aa8.56□□□□□ -1.04
PCDHGA3-202ENST00000612467 NDUFC1O43677 76 aa8.55□□□□□ -1.04
PCDHGA3-202ENST00000612467 Q6ZR54 194 aa8.55□□□□□ -1.04
PCDHGA3-202ENST00000612467 DNAH5Q8TE73 4624 aa8.55□□□□□ -1.04
PCDHGA3-202ENST00000612467 LY6G6CO95867 125 aa8.54□□□□□ -1.04
PCDHGA3-202ENST00000612467 V9GYY9 64 aa8.54□□□□□ -1.04
PCDHGA3-202ENST00000612467 HYDINQ4G0P3 5121 aa8.54□□□□□ -1.04
PCDHGA3-202ENST00000612467 LINC00472Q9H8W2 130 aa8.52□□□□□ -1.05
PCDHGA3-202ENST00000612467 IGLV5-52A0A0A0MRZ9 124 aa8.51□□□□□ -1.05
PCDHGA3-202ENST00000612467 PRR4Q16378 134 aa8.51□□□□□ -1.05
PCDHGA3-202ENST00000612467 C1orf195Q5TG92 126 aa8.51□□□□□ -1.05
PCDHGA3-202ENST00000612467 ALMS1Q8TCU4 4167 aa8.5□□□□□ -1.05
PCDHGA3-202ENST00000612467 MOBPQ13875 183 aa8.48□□□□□ -1.05
PCDHGA3-202ENST00000612467 C1orf134Q5TEV5 83 aa8.48□□□□□ -1.05
PCDHGA3-202ENST00000612467 ATP5EP56381 51 aaPredicted RBP8.48□□□□□ -1.05
PCDHGA3-202ENST00000612467 LCE6AA0A183 80 aa8.47□□□□□ -1.05
PCDHGA3-202ENST00000612467 PRR15Q8IV56 129 aa8.47□□□□□ -1.05
PCDHGA3-202ENST00000612467 KRTAP29-1A8MX34 341 aaPredicted RBP8.47□□□□□ -1.05
PCDHGA3-202ENST00000612467 CASC2Q6XLA1 102 aa8.46□□□□□ -1.05
PCDHGA3-202ENST00000612467 A8MWP4 228 aa8.45□□□□□ -1.06
PCDHGA3-202ENST00000612467 KRTAP10-2P60368 255 aa8.45□□□□□ -1.06
PCDHGA3-202ENST00000612467 WWC2-AS2Q96NR7 200 aa8.45□□□□□ -1.06
PCDHGA3-202ENST00000612467 PLAC8Q9NZF1 115 aa8.45□□□□□ -1.06
PCDHGA3-202ENST00000612467 ZCCHC13Q8WW36 166 aaKnown RBP8.45□□□□□ -1.06
PCDHGA3-202ENST00000612467 Q96NJ1 140 aa8.45□□□□□ -1.06
PCDHGA3-202ENST00000612467 LRP1BQ9NZR2 4599 aa8.44□□□□□ -1.06
PCDHGA3-202ENST00000612467 ZNF861PO60384 105 aa8.42□□□□□ -1.06
PCDHGA3-202ENST00000612467 LINC00208Q96KT6 92 aa8.42□□□□□ -1.06
PCDHGA3-202ENST00000612467 LINC00483Q53H64 154 aa8.42□□□□□ -1.06
PCDHGA3-202ENST00000612467 MMP24-AS1A0A0U1RRL7 71 aa8.4□□□□□ -1.06
PCDHGA3-202ENST00000612467 FAT2Q9NYQ8 4349 aa8.4□□□□□ -1.06
PCDHGA3-202ENST00000612467 PKD1P98161 4303 aa8.4□□□□□ -1.07
PCDHGA3-202ENST00000612467 A0A087X002 238 aa8.38□□□□□ -1.07
PCDHGA3-202ENST00000612467 NOTCH2NLQ7Z3S9 236 aa8.38□□□□□ -1.07
PCDHGA3-202ENST00000612467 CIRBP-AS1Q8TBR5 109 aa8.38□□□□□ -1.07
PCDHGA3-202ENST00000612467 H0Y9P7 68 aa8.38□□□□□ -1.07
PCDHGA3-202ENST00000612467 IGHV6-1A0A0B4J1U7 121 aa8.37□□□□□ -1.07
PCDHGA3-202ENST00000612467 PSPHP1O15172 72 aa8.36□□□□□ -1.07
PCDHGA3-202ENST00000612467 IGLV7-43P04211 117 aa8.36□□□□□ -1.07
PCDHGA3-202ENST00000612467 SPINK6Q6UWN8 80 aa8.36□□□□□ -1.07
PCDHGA3-202ENST00000612467 A8MU10 97 aa8.36□□□□□ -1.07
PCDHGA3-202ENST00000612467 hDV103S1A0JD37 113 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms