RNA–Protein interactions for RNA: ENST00000607520.1

SCARNA15-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 4,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-201ENST00000607520 LINC01547P58512 204 aaPredicted RBP3.26□□□□□ -1.89
SCARNA15-201ENST00000607520 TRBV7-6A0A0J9YX20 115 aa3.26□□□□□ -1.89
SCARNA15-201ENST00000607520 FAM236DA0A1B0GTK5 79 aa3.26□□□□□ -1.89
SCARNA15-201ENST00000607520 FAM236CP0DP71 79 aa3.26□□□□□ -1.89
SCARNA15-201ENST00000607520 ELOF1P60002 83 aaKnown RBP3.25□□□□□ -1.89
SCARNA15-201ENST00000607520 SNURFQ9Y675 71 aa3.25□□□□□ -1.89
SCARNA15-201ENST00000607520 MP68P56378 58 aa3.25□□□□□ -1.89
SCARNA15-201ENST00000607520 Q6ZQT0 140 aa3.25□□□□□ -1.89
SCARNA15-201ENST00000607520 KCNQ1DNQ9H478 68 aa3.25□□□□□ -1.89
SCARNA15-201ENST00000607520 FAM30AQ9NZY2 134 aa3.25□□□□□ -1.89
SCARNA15-201ENST00000607520 LOC110117498A0A087WWA1 95 aa3.24□□□□□ -1.89
SCARNA15-201ENST00000607520 NDUFC1O43677 76 aa3.24□□□□□ -1.89
SCARNA15-201ENST00000607520 OXTP01178 125 aa3.24□□□□□ -1.89
SCARNA15-201ENST00000607520 CXCL6P80162 114 aa3.24□□□□□ -1.89
SCARNA15-201ENST00000607520 CSMD1Q96PZ7 3565 aa3.24□□□□□ -1.89
SCARNA15-201ENST00000607520 IGLV5-37A0A075B6J1 123 aa3.24□□□□□ -1.89
SCARNA15-201ENST00000607520 KRTAP26-1Q6PEX3 210 aa3.24□□□□□ -1.89
SCARNA15-201ENST00000607520 PRR26Q8N8Z3 221 aa3.24□□□□□ -1.89
SCARNA15-201ENST00000607520 ANK3Q12955 4377 aaKnown RBP3.23□□□□□ -1.89
SCARNA15-201ENST00000607520 AKAP9Q99996 3911 aa3.22□□□□□ -1.89
SCARNA15-201ENST00000607520 FAM229BQ4G0N7 80 aa3.22□□□□□ -1.89
SCARNA15-201ENST00000607520 SPINK1P00995 79 aa3.22□□□□□ -1.89
SCARNA15-201ENST00000607520 SPRR4Q96PI1 79 aa3.22□□□□□ -1.89
SCARNA15-201ENST00000607520 CSMD2Q7Z408 3487 aa3.21□□□□□ -1.89
SCARNA15-201ENST00000607520 Q8N9L7 120 aa3.21□□□□□ -1.9
SCARNA15-201ENST00000607520 A0A087WSZ3 146 aa3.21□□□□□ -1.9
SCARNA15-201ENST00000607520 WFDC13Q8IUB5 93 aa3.21□□□□□ -1.9
SCARNA15-201ENST00000607520 OBSCN-AS1Q96MR7 158 aa3.21□□□□□ -1.9
SCARNA15-201ENST00000607520 IGKV4-1P06312 121 aa3.2□□□□□ -1.9
SCARNA15-201ENST00000607520 ATP5EP56381 51 aaPredicted RBP3.2□□□□□ -1.9
SCARNA15-201ENST00000607520 ANAPC11Q9NYG5 84 aa3.2□□□□□ -1.9
SCARNA15-201ENST00000607520 IGLV7-46A0A075B6I9 117 aa3.2□□□□□ -1.9
SCARNA15-201ENST00000607520 ST20-AS1Q8NBB2 130 aa3.2□□□□□ -1.9
SCARNA15-201ENST00000607520 A0A0U1RQV1 116 aa3.2□□□□□ -1.9
SCARNA15-201ENST00000607520 A0A1B0GW54 56 aa3.19□□□□□ -1.9
SCARNA15-201ENST00000607520 TMEM254Q8TBM7 123 aa3.19□□□□□ -1.9
SCARNA15-201ENST00000607520 ATP11AUNQ6ZP68 121 aa3.19□□□□□ -1.9
SCARNA15-201ENST00000607520 H3BS24 57 aa3.19□□□□□ -1.9
SCARNA15-201ENST00000607520 COX6B2Q6YFQ2 88 aa3.19□□□□□ -1.9
SCARNA15-201ENST00000607520 SERP1Q9Y6X1 66 aa3.19□□□□□ -1.9
SCARNA15-201ENST00000607520 TRBV7-4A0A0J9YYF1 115 aa3.18□□□□□ -1.9
SCARNA15-201ENST00000607520 IGHV6-1A0A0B4J1U7 121 aa3.18□□□□□ -1.9
SCARNA15-201ENST00000607520 SMIM26A0A096LP01 95 aa3.18□□□□□ -1.9
SCARNA15-201ENST00000607520 DEFB116Q30KQ4 102 aa3.18□□□□□ -1.9
SCARNA15-201ENST00000607520 RPS28P62857 69 aaKnown RBP3.17□□□□□ -1.9
SCARNA15-201ENST00000607520 Q8NDZ9 215 aa3.17□□□□□ -1.9
SCARNA15-201ENST00000607520 MPLKIPQ8TAP9 179 aa3.17□□□□□ -1.9
SCARNA15-201ENST00000607520 PANO1I0J062 215 aa3.17□□□□□ -1.9
SCARNA15-201ENST00000607520 C5orf47Q569G3 176 aa3.17□□□□□ -1.9
SCARNA15-201ENST00000607520 Q8N377 158 aa3.17□□□□□ -1.9
SCARNA15-201ENST00000607520 A0A1B0GVY2 172 aa3.16□□□□□ -1.9
SCARNA15-201ENST00000607520 HCG22E2RYF7 251 aa3.16□□□□□ -1.9
SCARNA15-201ENST00000607520 SMIM29Q86T20 159 aa3.16□□□□□ -1.9
SCARNA15-201ENST00000607520 LINC00208Q96KT6 92 aa3.16□□□□□ -1.9
SCARNA15-201ENST00000607520 CASC2Q6XLA1 102 aa3.15□□□□□ -1.9
SCARNA15-201ENST00000607520 Q6ZSA8 131 aa3.15□□□□□ -1.91
SCARNA15-201ENST00000607520 SVEP1Q4LDE5 3571 aa3.15□□□□□ -1.91
SCARNA15-201ENST00000607520 BRK1Q8WUW1 75 aa3.15□□□□□ -1.91
SCARNA15-201ENST00000607520 Q96NJ1 140 aa3.14□□□□□ -1.91
SCARNA15-201ENST00000607520 RETNLBQ9BQ08 111 aa3.14□□□□□ -1.91
SCARNA15-201ENST00000607520 ERC2-IT1O76042 136 aa3.14□□□□□ -1.91
SCARNA15-201ENST00000607520 LINC00313P59037 77 aa3.14□□□□□ -1.91
SCARNA15-201ENST00000607520 CD164Q04900 197 aa3.13□□□□□ -1.91
SCARNA15-201ENST00000607520 SEC61BP60468 96 aaKnown RBP3.13□□□□□ -1.91
SCARNA15-201ENST00000607520 C9orf92A6NGG3 77 aa3.13□□□□□ -1.91
SCARNA15-201ENST00000607520 IGLV5-48A0A075B6I7 105 aa3.12□□□□□ -1.91
SCARNA15-201ENST00000607520 KLKP1Q107X0 134 aa3.12□□□□□ -1.91
SCARNA15-201ENST00000607520 A0A1W2PNM2 257 aa3.12□□□□□ -1.91
SCARNA15-201ENST00000607520 H0Y9P7 68 aa3.12□□□□□ -1.91
SCARNA15-201ENST00000607520 C8orf87E5RJ46 101 aa3.11□□□□□ -1.91
SCARNA15-201ENST00000607520 K7EQZ3 153 aa3.11□□□□□ -1.91
SCARNA15-201ENST00000607520 IGFL1Q6UW32 110 aa3.11□□□□□ -1.91
SCARNA15-201ENST00000607520 CUBNO60494 3623 aa3.11□□□□□ -1.91
SCARNA15-201ENST00000607520 SPRR1AP35321 89 aa3.11□□□□□ -1.91
SCARNA15-201ENST00000607520 FP248Q71RG6 208 aaPredicted RBP3.11□□□□□ -1.91
SCARNA15-201ENST00000607520 V9GYY9 64 aa3.11□□□□□ -1.91
SCARNA15-201ENST00000607520 CHKB-CPT1BH3BT56 60 aa3.1□□□□□ -1.91
SCARNA15-201ENST00000607520 H7BZZ5 65 aa3.1□□□□□ -1.91
SCARNA15-201ENST00000607520 A0A0G2JQZ4 141 aa3.1□□□□□ -1.91
SCARNA15-201ENST00000607520 hDV103S1A0JD37 113 aa3.1□□□□□ -1.91
SCARNA15-201ENST00000607520 C4orf26Q17RF5 130 aa3.1□□□□□ -1.91
SCARNA15-201ENST00000607520 MEGF8Q7Z7M0 2845 aa3.09□□□□□ -1.91
SCARNA15-201ENST00000607520 C1orf64Q8NEQ6 169 aa3.09□□□□□ -1.91
SCARNA15-201ENST00000607520 TRRAPQ9Y4A5 3859 aa3.09□□□□□ -1.91
SCARNA15-201ENST00000607520 PCOTHQ58A44 107 aa3.08□□□□□ -1.92
SCARNA15-201ENST00000607520 SVIPQ8NHG7 77 aa3.08□□□□□ -1.92
SCARNA15-201ENST00000607520 A8MWP4 228 aa3.07□□□□□ -1.92
SCARNA15-201ENST00000607520 KRTAP29-1A8MX34 341 aaPredicted RBP3.07□□□□□ -1.92
SCARNA15-201ENST00000607520 RBM12B-AS1Q9P1G2 102 aa3.07□□□□□ -1.92
SCARNA15-201ENST00000607520 H3BPC8 53 aa3.07□□□□□ -1.92
SCARNA15-201ENST00000607520 SPRR1BP22528 89 aa3.07□□□□□ -1.92
SCARNA15-201ENST00000607520 PRR15Q8IV56 129 aa3.07□□□□□ -1.92
SCARNA15-201ENST00000607520 TP53AIP1Q9HCN2 124 aa3.07□□□□□ -1.92
SCARNA15-201ENST00000607520 DNHD1Q96M86 4753 aa3.07□□□□□ -1.92
SCARNA15-201ENST00000607520 M0R2T5 61 aa3.07□□□□□ -1.92
SCARNA15-201ENST00000607520 IGKV2D-30A0A075B6S6 120 aa3.06□□□□□ -1.92
SCARNA15-201ENST00000607520 TRAV22A0A0B4J277 110 aa3.06□□□□□ -1.92
SCARNA15-201ENST00000607520 IGKV2-30P06310 120 aa3.06□□□□□ -1.92
SCARNA15-201ENST00000607520 OCR1Q9BZK8 76 aa3.06□□□□□ -1.92
SCARNA15-201ENST00000607520 CYSTM1Q9H1C7 97 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms