RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 NDUFAF8A1L188 74 aa3.06□□□□□ -1.92
LINC01109-201ENST00000603837 KRTAP4-16G5E9R7 235 aaPredicted RBP3.06□□□□□ -1.92
LINC01109-201ENST00000603837 SPAG11BQ08648 103 aa3.06□□□□□ -1.92
LINC01109-201ENST00000603837 Q8NDZ9 215 aa3.06□□□□□ -1.92
LINC01109-201ENST00000603837 KLK12Q9UKR0 248 aa3.06□□□□□ -1.92
LINC01109-201ENST00000603837 ODF3BA8MYP8 253 aa3.06□□□□□ -1.92
LINC01109-201ENST00000603837 LINC01558Q9Y6Z2 57 aa3.06□□□□□ -1.92
LINC01109-201ENST00000603837 STAB1Q9NY15 2570 aa3.05□□□□□ -1.92
LINC01109-201ENST00000603837 IGHV4-30-2A0A087WSY4 118 aa3.05□□□□□ -1.92
LINC01109-201ENST00000603837 A8MTW9 85 aa3.05□□□□□ -1.92
LINC01109-201ENST00000603837 IGHV3-11P01762 117 aa3.05□□□□□ -1.92
LINC01109-201ENST00000603837 TLX1NBP0CAT3 122 aa3.05□□□□□ -1.92
LINC01109-201ENST00000603837 SPINK13Q1W4C9 94 aa3.05□□□□□ -1.92
LINC01109-201ENST00000603837 MINOS1Q5TGZ0 78 aa3.05□□□□□ -1.92
LINC01109-201ENST00000603837 COA5Q86WW8 74 aa3.05□□□□□ -1.92
LINC01109-201ENST00000603837 COL6A5A8TX70 2615 aa3.05□□□□□ -1.92
LINC01109-201ENST00000603837 IGKV3OR2-268A0A0C4DH90 116 aa3.05□□□□□ -1.92
LINC01109-201ENST00000603837 HTN1P15515 57 aa3.05□□□□□ -1.92
LINC01109-201ENST00000603837 BRD3OSQ6XYD6 125 aa3.05□□□□□ -1.92
LINC01109-201ENST00000603837 Q6ZR54 194 aa3.05□□□□□ -1.92
LINC01109-201ENST00000603837 K7ERS5 55 aa3.04□□□□□ -1.92
LINC01109-201ENST00000603837 CAMK2N2Q96S95 79 aa3.04□□□□□ -1.92
LINC01109-201ENST00000603837 TENM1Q9UKZ4 2725 aa3.04□□□□□ -1.92
LINC01109-201ENST00000603837 NBEAL1Q6ZS30 2694 aa3.04□□□□□ -1.92
LINC01109-201ENST00000603837 KRTAP17-1Q9BYP8 105 aa3.04□□□□□ -1.92
LINC01109-201ENST00000603837 AKAP9Q99996 3911 aa3.04□□□□□ -1.92
LINC01109-201ENST00000603837 CR1P17927 2039 aa3.04□□□□□ -1.92
LINC01109-201ENST00000603837 G3V318 75 aa3.04□□□□□ -1.92
LINC01109-201ENST00000603837 KCNQ1DNQ9H478 68 aa3.04□□□□□ -1.92
LINC01109-201ENST00000603837 VWFP04275 2813 aa3.03□□□□□ -1.92
LINC01109-201ENST00000603837 DEFB113Q30KQ7 82 aa3.03□□□□□ -1.92
LINC01109-201ENST00000603837 SPAG11AQ6PDA7 123 aa3.03□□□□□ -1.92
LINC01109-201ENST00000603837 RHPN1-AS1Q9BWJ2 59 aa3.03□□□□□ -1.92
LINC01109-201ENST00000603837 PLAC8Q9NZF1 115 aa3.03□□□□□ -1.92
LINC01109-201ENST00000603837 A0A1W2PNM2 257 aa3.03□□□□□ -1.92
LINC01109-201ENST00000603837 DEFB112Q30KQ8 113 aa3.03□□□□□ -1.92
LINC01109-201ENST00000603837 IGLV8-61A0A075B6I0 122 aa3.02□□□□□ -1.93
LINC01109-201ENST00000603837 NOTCH1P46531 2555 aa3.02□□□□□ -1.93
LINC01109-201ENST00000603837 LY6EQ16553 131 aa3.02□□□□□ -1.93
LINC01109-201ENST00000603837 Q8NBF4 154 aa3.02□□□□□ -1.93
LINC01109-201ENST00000603837 C7orf33Q8WU49 177 aa3.02□□□□□ -1.93
LINC01109-201ENST00000603837 C20orf166-AS1Q96NR2 134 aa3.02□□□□□ -1.93
LINC01109-201ENST00000603837 A0A087X002 238 aa3.01□□□□□ -1.93
LINC01109-201ENST00000603837 RTL8CO15255 209 aa3.01□□□□□ -1.93
LINC01109-201ENST00000603837 NBEAL2Q6ZNJ1 2754 aa3.01□□□□□ -1.93
LINC01109-201ENST00000603837 TRGV4A0A0C4DH28 118 aa3.01□□□□□ -1.93
LINC01109-201ENST00000603837 A8MUU9 505 aa3.01□□□□□ -1.93
LINC01109-201ENST00000603837 CNBPP62633 177 aaKnown RBP3.01□□□□□ -1.93
LINC01109-201ENST00000603837 H3BPC8 53 aa3□□□□□ -1.93
LINC01109-201ENST00000603837 FBN1P35555 2871 aaKnown RBP3□□□□□ -1.93
LINC01109-201ENST00000603837 H0Y9P7 68 aa3□□□□□ -1.93
LINC01109-201ENST00000603837 Q8IZM0 81 aa3□□□□□ -1.93
LINC01109-201ENST00000603837 SMR3AQ99954 134 aa3□□□□□ -1.93
LINC01109-201ENST00000603837 TRRAPQ9Y4A5 3859 aa2.99□□□□□ -1.93
LINC01109-201ENST00000603837 K7EQZ3 153 aa2.99□□□□□ -1.93
LINC01109-201ENST00000603837 MSMBP08118 114 aa2.99□□□□□ -1.93
LINC01109-201ENST00000603837 XAGE1AQ9HD64 81 aa2.99□□□□□ -1.93
LINC01109-201ENST00000603837 COX17Q14061 63 aa2.99□□□□□ -1.93
LINC01109-201ENST00000603837 LINC00959A0A1B0GUT2 108 aa2.99□□□□□ -1.93
LINC01109-201ENST00000603837 A0A1B0GVX0 72 aa2.99□□□□□ -1.93
LINC01109-201ENST00000603837 IGLV6-57P01721 117 aa2.99□□□□□ -1.93
LINC01109-201ENST00000603837 DSCR10P59022 87 aa2.99□□□□□ -1.93
LINC01109-201ENST00000603837 PKD1L1Q8TDX9 2849 aa2.98□□□□□ -1.93
LINC01109-201ENST00000603837 MGAM2Q2M2H8 2515 aa2.98□□□□□ -1.93
LINC01109-201ENST00000603837 H3BUX3 64 aa2.98□□□□□ -1.93
LINC01109-201ENST00000603837 INSP01308 110 aa2.98□□□□□ -1.93
LINC01109-201ENST00000603837 C9orf163Q8N9P6 203 aa2.98□□□□□ -1.93
LINC01109-201ENST00000603837 DEFB116Q30KQ4 102 aa2.98□□□□□ -1.93
LINC01109-201ENST00000603837 WFDC13Q8IUB5 93 aa2.98□□□□□ -1.93
LINC01109-201ENST00000603837 A6NDX4 124 aa2.97□□□□□ -1.93
LINC01109-201ENST00000603837 DNAH10OSP0CZ25 163 aa2.97□□□□□ -1.93
LINC01109-201ENST00000603837 IGLV7-46A0A075B6I9 117 aa2.97□□□□□ -1.93
LINC01109-201ENST00000603837 A0A1B0GW54 56 aa2.97□□□□□ -1.93
LINC01109-201ENST00000603837 IGKV2D-24A0A075B6R9 120 aa2.96□□□□□ -1.94
LINC01109-201ENST00000603837 LINC00483Q53H64 154 aa2.96□□□□□ -1.94
LINC01109-201ENST00000603837 C10orf99Q6UWK7 81 aa2.96□□□□□ -1.94
LINC01109-201ENST00000603837 KPRPQ5T749 579 aaPredicted RBP2.96□□□□□ -1.94
LINC01109-201ENST00000603837 WFDC10BQ8IUB3 73 aa2.96□□□□□ -1.94
LINC01109-201ENST00000603837 CASC10Q5T4H9 136 aa2.95□□□□□ -1.94
LINC01109-201ENST00000603837 USMG5Q96IX5 58 aa2.95□□□□□ -1.94
LINC01109-201ENST00000603837 IGLV1-50A0A075B6I6 118 aa2.95□□□□□ -1.94
LINC01109-201ENST00000603837 TRGV1A0A0A0MS02 117 aa2.95□□□□□ -1.94
LINC01109-201ENST00000603837 C5orf56Q8N8D9 126 aa2.94□□□□□ -1.94
LINC01109-201ENST00000603837 ANK3Q12955 4377 aaKnown RBP2.94□□□□□ -1.94
LINC01109-201ENST00000603837 H3BUA1 57 aa2.94□□□□□ -1.94
LINC01109-201ENST00000603837 IGLV5-48A0A075B6I7 105 aa2.93□□□□□ -1.94
LINC01109-201ENST00000603837 DEFB105AQ8NG35 78 aa2.93□□□□□ -1.94
LINC01109-201ENST00000603837 A0A0J9YWU9 116 aa2.93□□□□□ -1.94
LINC01109-201ENST00000603837 PCOTHQ58A44 107 aa2.93□□□□□ -1.94
LINC01109-201ENST00000603837 CLPSL2Q6UWE3 100 aa2.93□□□□□ -1.94
LINC01109-201ENST00000603837 C1orf137Q5JT78 98 aa2.92□□□□□ -1.94
LINC01109-201ENST00000603837 HRES1P13985 223 aa2.92□□□□□ -1.94
LINC01109-201ENST00000603837 DEFB131AP59861 70 aa2.92□□□□□ -1.94
LINC01109-201ENST00000603837 DEFB136Q30KP8 78 aa2.92□□□□□ -1.94
LINC01109-201ENST00000603837 SPATA8Q6RVD6 105 aa2.92□□□□□ -1.94
LINC01109-201ENST00000603837 KRTAP5-3Q6L8H2 238 aa2.91□□□□□ -1.94
LINC01109-201ENST00000603837 KRTAP29-1A8MX34 341 aaPredicted RBP2.91□□□□□ -1.94
LINC01109-201ENST00000603837 Q8N377 158 aa2.91□□□□□ -1.94
LINC01109-201ENST00000603837 SPRR4Q96PI1 79 aa2.91□□□□□ -1.94
LINC01109-201ENST00000603837 KRTAP1-1Q07627 177 aa2.9□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms