RNA–Protein interactions for RNA: ENST00000603731.1

HERPUD2-207, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-207ENST00000603731 NDUFV3P56181 108 aaKnown RBP7.75□□□□□ -1.17
HERPUD2-207ENST00000603731 Q8N377 158 aa7.75□□□□□ -1.17
HERPUD2-207ENST00000603731 A0A1B0GV72 72 aa7.74□□□□□ -1.17
HERPUD2-207ENST00000603731 J3QR89 54 aa7.74□□□□□ -1.17
HERPUD2-207ENST00000603731 LINC01547P58512 204 aaPredicted RBP7.74□□□□□ -1.17
HERPUD2-207ENST00000603731 ZNF706Q9Y5V0 76 aaPredicted RBP7.74□□□□□ -1.17
HERPUD2-207ENST00000603731 GAGE2AQ6NT46 116 aa7.73□□□□□ -1.17
HERPUD2-207ENST00000603731 RPL37AP61513 92 aaKnown RBP7.72□□□□□ -1.17
HERPUD2-207ENST00000603731 RBM3P98179 157 aaKnown RBP7.72□□□□□ -1.17
HERPUD2-207ENST00000603731 F8WEM9 126 aa7.71□□□□□ -1.18
HERPUD2-207ENST00000603731 OBSCN-AS1Q96MR7 158 aa7.71□□□□□ -1.18
HERPUD2-207ENST00000603731 C14orf132Q9NPU4 83 aa7.71□□□□□ -1.18
HERPUD2-207ENST00000603731 K7ERU9 68 aa7.7□□□□□ -1.18
HERPUD2-207ENST00000603731 SMR3BP02814 79 aaPredicted RBP7.7□□□□□ -1.18
HERPUD2-207ENST00000603731 DSCR8Q96T75 97 aa7.7□□□□□ -1.18
HERPUD2-207ENST00000603731 HMCN2Q8NDA2 5059 aa7.7□□□□□ -1.18
HERPUD2-207ENST00000603731 FLG2Q5D862 2391 aaPredicted RBP7.69□□□□□ -1.18
HERPUD2-207ENST00000603731 SPRR1BP22528 89 aa7.69□□□□□ -1.18
HERPUD2-207ENST00000603731 C3orf22Q8N5N4 141 aa7.69□□□□□ -1.18
HERPUD2-207ENST00000603731 SPRR4Q96PI1 79 aa7.69□□□□□ -1.18
HERPUD2-207ENST00000603731 FAT1Q14517 4588 aa7.67□□□□□ -1.18
HERPUD2-207ENST00000603731 VPS13BQ7Z7G8 4022 aa7.67□□□□□ -1.18
HERPUD2-207ENST00000603731 PDE6GP18545 87 aa7.66□□□□□ -1.18
HERPUD2-207ENST00000603731 SMIM29Q86T20 159 aa7.66□□□□□ -1.18
HERPUD2-207ENST00000603731 LOC110117498A0A087WWA1 95 aa7.64□□□□□ -1.19
HERPUD2-207ENST00000603731 C21orf62-AS1Q17RA5 79 aa7.64□□□□□ -1.19
HERPUD2-207ENST00000603731 LINC00483Q53H64 154 aa7.64□□□□□ -1.19
HERPUD2-207ENST00000603731 TRBV7-4A0A0J9YYF1 115 aa7.63□□□□□ -1.19
HERPUD2-207ENST00000603731 FAM229AH3BQW9 127 aa7.63□□□□□ -1.19
HERPUD2-207ENST00000603731 CCKP06307 115 aa7.63□□□□□ -1.19
HERPUD2-207ENST00000603731 PLA2G1BP04054 148 aaKnown RBP7.62□□□□□ -1.19
HERPUD2-207ENST00000603731 SPINK6Q6UWN8 80 aa7.62□□□□□ -1.19
HERPUD2-207ENST00000603731 Q6ZQT0 140 aa7.62□□□□□ -1.19
HERPUD2-207ENST00000603731 VPS25Q9BRG1 176 aa7.62□□□□□ -1.19
HERPUD2-207ENST00000603731 IGLV9-49A0A0B4J1Y8 123 aa7.61□□□□□ -1.19
HERPUD2-207ENST00000603731 ACYP1P07311 99 aa7.61□□□□□ -1.19
HERPUD2-207ENST00000603731 C9orf153Q5TBE3 101 aa7.61□□□□□ -1.19
HERPUD2-207ENST00000603731 IGLV8-61A0A075B6I0 122 aa7.6□□□□□ -1.19
HERPUD2-207ENST00000603731 Q6JHZ5 121 aa7.6□□□□□ -1.19
HERPUD2-207ENST00000603731 ANAPC11Q9NYG5 84 aa7.6□□□□□ -1.19
HERPUD2-207ENST00000603731 FAM240AA0A1B0GVK7 77 aa7.59□□□□□ -1.19
HERPUD2-207ENST00000603731 J3QL48 77 aa7.58□□□□□ -1.2
HERPUD2-207ENST00000603731 IGFL1Q6UW32 110 aa7.57□□□□□ -1.2
HERPUD2-207ENST00000603731 Q8NBF4 154 aa7.57□□□□□ -1.2
HERPUD2-207ENST00000603731 MOBPQ13875 183 aa7.56□□□□□ -1.2
HERPUD2-207ENST00000603731 FAM229BQ4G0N7 80 aa7.56□□□□□ -1.2
HERPUD2-207ENST00000603731 Q5VSD8 79 aa7.56□□□□□ -1.2
HERPUD2-207ENST00000603731 KRTAP10-4P60372 401 aaPredicted RBP7.54□□□□□ -1.2
HERPUD2-207ENST00000603731 A0A0G2JQZ4 141 aa7.53□□□□□ -1.2
HERPUD2-207ENST00000603731 A0A1W2PNM2 257 aa7.53□□□□□ -1.2
HERPUD2-207ENST00000603731 CRYGAP11844 174 aa7.53□□□□□ -1.2
HERPUD2-207ENST00000603731 A0A1B0GW54 56 aa7.52□□□□□ -1.21
HERPUD2-207ENST00000603731 KRTAP1-4P0C5Y4 121 aa7.52□□□□□ -1.21
HERPUD2-207ENST00000603731 SSBP3-AS1Q7Z2R9 100 aa7.52□□□□□ -1.21
HERPUD2-207ENST00000603731 UBL5Q9BZL1 73 aa7.51□□□□□ -1.21
HERPUD2-207ENST00000603731 LINC00846Q9NV44 126 aa7.51□□□□□ -1.21
HERPUD2-207ENST00000603731 RNF213Q63HN8 5207 aa7.5□□□□□ -1.21
HERPUD2-207ENST00000603731 A0A087X002 238 aa7.49□□□□□ -1.21
HERPUD2-207ENST00000603731 CDIP1Q9H305 208 aa7.49□□□□□ -1.21
HERPUD2-207ENST00000603731 Q6Q795 121 aa7.48□□□□□ -1.21
HERPUD2-207ENST00000603731 KRTAP13-2Q52LG2 175 aa7.47□□□□□ -1.21
HERPUD2-207ENST00000603731 HRCT1Q6UXD1 115 aa7.47□□□□□ -1.21
HERPUD2-207ENST00000603731 TYMSOSQ8TAI1 123 aa7.47□□□□□ -1.21
HERPUD2-207ENST00000603731 A0A087WSZ3 146 aa7.46□□□□□ -1.22
HERPUD2-207ENST00000603731 NREPQ16612 68 aa7.46□□□□□ -1.22
HERPUD2-207ENST00000603731 LINC00643Q86TS7 51 aa7.46□□□□□ -1.22
HERPUD2-207ENST00000603731 TRBV7-7A0A0K0K1E9 115 aa7.45□□□□□ -1.22
HERPUD2-207ENST00000603731 Q6ZVQ6 151 aa7.45□□□□□ -1.22
HERPUD2-207ENST00000603731 CD164Q04900 197 aa7.44□□□□□ -1.22
HERPUD2-207ENST00000603731 PRR26Q8N8Z3 221 aa7.44□□□□□ -1.22
HERPUD2-207ENST00000603731 C4orf48Q5BLP8 95 aa7.43□□□□□ -1.22
HERPUD2-207ENST00000603731 SIGMAR1Q99720 223 aa7.42□□□□□ -1.22
HERPUD2-207ENST00000603731 SS18L2Q9UHA2 77 aa7.42□□□□□ -1.22
HERPUD2-207ENST00000603731 KRTAP29-1A8MX34 341 aaPredicted RBP7.41□□□□□ -1.22
HERPUD2-207ENST00000603731 LRP1Q07954 4544 aaKnown RBP7.4□□□□□ -1.22
HERPUD2-207ENST00000603731 IGKV3D-7A0A0C4DH55 119 aa7.4□□□□□ -1.22
HERPUD2-207ENST00000603731 ATP5EP2Q5VTU8 51 aa7.4□□□□□ -1.22
HERPUD2-207ENST00000603731 MT-ATP8P03928 68 aa7.39□□□□□ -1.23
HERPUD2-207ENST00000603731 BPY2O14599 106 aa7.38□□□□□ -1.23
HERPUD2-207ENST00000603731 SPAG11AQ6PDA7 123 aa7.37□□□□□ -1.23
HERPUD2-207ENST00000603731 LINC00304Q8N9R0 145 aa7.37□□□□□ -1.23
HERPUD2-207ENST00000603731 PKHD1L1Q86WI1 4243 aa7.37□□□□□ -1.23
HERPUD2-207ENST00000603731 CXCL6P80162 114 aa7.36□□□□□ -1.23
HERPUD2-207ENST00000603731 LIMD2Q9BT23 127 aa7.36□□□□□ -1.23
HERPUD2-207ENST00000603731 LRP2P98164 4655 aa7.35□□□□□ -1.23
HERPUD2-207ENST00000603731 SPINK1P00995 79 aa7.35□□□□□ -1.23
HERPUD2-207ENST00000603731 KRTAP9-2Q9BYQ4 174 aa7.34□□□□□ -1.23
HERPUD2-207ENST00000603731 FAT3Q8TDW7 4589 aa7.34□□□□□ -1.24
HERPUD2-207ENST00000603731 DEFB116Q30KQ4 102 aa7.33□□□□□ -1.24
HERPUD2-207ENST00000603731 IMUPQ9GZP8 106 aa7.33□□□□□ -1.24
HERPUD2-207ENST00000603731 J3KT08 172 aa7.32□□□□□ -1.24
HERPUD2-207ENST00000603731 HIST1H4AP62805 103 aaKnown RBP7.32□□□□□ -1.24
HERPUD2-207ENST00000603731 LINC00472Q9H8W2 130 aa7.32□□□□□ -1.24
HERPUD2-207ENST00000603731 KRTAP9-6A0A140TA67 174 aa7.31□□□□□ -1.24
HERPUD2-207ENST00000603731 IGKV4-1P06312 121 aa7.3□□□□□ -1.24
HERPUD2-207ENST00000603731 RPS29P62273 56 aaKnown RBP7.3□□□□□ -1.24
HERPUD2-207ENST00000603731 ASB16-AS1Q495Z4 193 aa7.3□□□□□ -1.24
HERPUD2-207ENST00000603731 Q5XG85 94 aa7.3□□□□□ -1.24
HERPUD2-207ENST00000603731 KRTAP10-8P60410 259 aa7.28□□□□□ -1.24
HERPUD2-207ENST00000603731 Q96NJ1 140 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms