RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 FAM19A1Q7Z5A9 133 aa7.13□□□□□ -1.27
ZNF548-211ENST00000600927 LAMTOR3Q9UHA4 124 aa7.12□□□□□ -1.27
ZNF548-211ENST00000600927 LRP1Q07954 4544 aaKnown RBP7.12□□□□□ -1.27
ZNF548-211ENST00000600927 NDUFV3P56181 108 aaKnown RBP7.11□□□□□ -1.27
ZNF548-211ENST00000600927 SMCR5Q8TEV8 140 aa7.11□□□□□ -1.27
ZNF548-211ENST00000600927 LOC110117498A0A087WWA1 95 aa7.1□□□□□ -1.27
ZNF548-211ENST00000600927 LINC01547P58512 204 aaPredicted RBP7.1□□□□□ -1.27
ZNF548-211ENST00000600927 Q8N377 158 aa7.1□□□□□ -1.27
ZNF548-211ENST00000600927 FLG2Q5D862 2391 aaPredicted RBP7.1□□□□□ -1.27
ZNF548-211ENST00000600927 CCKP06307 115 aa7.09□□□□□ -1.27
ZNF548-211ENST00000600927 KRTAP13-1Q8IUC0 172 aa7.09□□□□□ -1.27
ZNF548-211ENST00000600927 KRTAP11-1Q8IUC1 163 aa7.09□□□□□ -1.27
ZNF548-211ENST00000600927 DSCR8Q96T75 97 aa7.09□□□□□ -1.27
ZNF548-211ENST00000600927 VPS25Q9BRG1 176 aa7.09□□□□□ -1.27
ZNF548-211ENST00000600927 A0A1B0GW54 56 aa7.08□□□□□ -1.28
ZNF548-211ENST00000600927 SPRR1BP22528 89 aa7.08□□□□□ -1.28
ZNF548-211ENST00000600927 UBE2AP49459 152 aa7.08□□□□□ -1.28
ZNF548-211ENST00000600927 DMBT1Q9UGM3 2413 aaPredicted RBP7.07□□□□□ -1.28
ZNF548-211ENST00000600927 TRBV7-4A0A0J9YYF1 115 aa7.07□□□□□ -1.28
ZNF548-211ENST00000600927 RPL37AP61513 92 aaKnown RBP7.07□□□□□ -1.28
ZNF548-211ENST00000600927 C14orf132Q9NPU4 83 aa7.07□□□□□ -1.28
ZNF548-211ENST00000600927 ERC2-IT1O76042 136 aa7.06□□□□□ -1.28
ZNF548-211ENST00000600927 PRLHP81277 87 aa7.05□□□□□ -1.28
ZNF548-211ENST00000600927 Q6ZQT0 140 aa7.05□□□□□ -1.28
ZNF548-211ENST00000600927 HIGD2AQ9BW72 106 aa7.05□□□□□ -1.28
ZNF548-211ENST00000600927 CDIP1Q9H305 208 aa7.05□□□□□ -1.28
ZNF548-211ENST00000600927 PSORS1C2Q9UIG4 136 aa7.05□□□□□ -1.28
ZNF548-211ENST00000600927 KRTAP29-1A8MX34 341 aaPredicted RBP7.04□□□□□ -1.28
ZNF548-211ENST00000600927 ZNF861PO60384 105 aa7.04□□□□□ -1.28
ZNF548-211ENST00000600927 IGLV8-61A0A075B6I0 122 aa7.03□□□□□ -1.28
ZNF548-211ENST00000600927 GAGE2AQ6NT46 116 aa7.03□□□□□ -1.28
ZNF548-211ENST00000600927 DEFB105AQ8NG35 78 aa7.03□□□□□ -1.28
ZNF548-211ENST00000600927 ZNF706Q9Y5V0 76 aaPredicted RBP7.03□□□□□ -1.28
ZNF548-211ENST00000600927 ST20-AS1Q8NBB2 130 aa7.02□□□□□ -1.29
ZNF548-211ENST00000600927 SIGMAR1Q99720 223 aa7.02□□□□□ -1.29
ZNF548-211ENST00000600927 C1orf137Q5JT78 98 aa7.01□□□□□ -1.29
ZNF548-211ENST00000600927 SMIM29Q86T20 159 aa7.01□□□□□ -1.29
ZNF548-211ENST00000600927 F8WEM9 126 aa7□□□□□ -1.29
ZNF548-211ENST00000600927 IGLV7-43P04211 117 aa7□□□□□ -1.29
ZNF548-211ENST00000600927 LINC00643Q86TS7 51 aa7□□□□□ -1.29
ZNF548-211ENST00000600927 LINC00483Q53H64 154 aa6.99□□□□□ -1.29
ZNF548-211ENST00000600927 Q6JHZ5 121 aa6.99□□□□□ -1.29
ZNF548-211ENST00000600927 OXTP01178 125 aa6.98□□□□□ -1.29
ZNF548-211ENST00000600927 SPRR4Q96PI1 79 aa6.97□□□□□ -1.29
ZNF548-211ENST00000600927 IMUPQ9GZP8 106 aa6.97□□□□□ -1.29
ZNF548-211ENST00000600927 TNXBP22105 4242 aa6.97□□□□□ -1.29
ZNF548-211ENST00000600927 HMCN2Q8NDA2 5059 aa6.96□□□□□ -1.29
ZNF548-211ENST00000600927 UBL5Q9BZL1 73 aa6.96□□□□□ -1.3
ZNF548-211ENST00000600927 LINC00846Q9NV44 126 aa6.96□□□□□ -1.3
ZNF548-211ENST00000600927 Q6Q795 121 aa6.95□□□□□ -1.3
ZNF548-211ENST00000600927 J3QL48 77 aa6.94□□□□□ -1.3
ZNF548-211ENST00000600927 ATP5EP2Q5VTU8 51 aa6.94□□□□□ -1.3
ZNF548-211ENST00000600927 C3orf22Q8N5N4 141 aa6.94□□□□□ -1.3
ZNF548-211ENST00000600927 Q8NBF4 154 aa6.94□□□□□ -1.3
ZNF548-211ENST00000600927 A0A1B0GV72 72 aa6.93□□□□□ -1.3
ZNF548-211ENST00000600927 SCGB1A1P11684 91 aa6.93□□□□□ -1.3
ZNF548-211ENST00000600927 MT1HL1P0DM35 61 aa6.92□□□□□ -1.3
ZNF548-211ENST00000600927 CRYGAP11844 174 aa6.92□□□□□ -1.3
ZNF548-211ENST00000600927 TRBV7-7A0A0K0K1E9 115 aa6.91□□□□□ -1.3
ZNF548-211ENST00000600927 A0A1W2PNM2 257 aa6.91□□□□□ -1.3
ZNF548-211ENST00000600927 MT-ATP8P03928 68 aa6.91□□□□□ -1.3
ZNF548-211ENST00000600927 IGFL1Q6UW32 110 aa6.91□□□□□ -1.3
ZNF548-211ENST00000600927 SPINK6Q6UWN8 80 aa6.9□□□□□ -1.3
ZNF548-211ENST00000600927 CXCL6P80162 114 aa6.88□□□□□ -1.31
ZNF548-211ENST00000600927 NREPQ16612 68 aa6.88□□□□□ -1.31
ZNF548-211ENST00000600927 FAM229BQ4G0N7 80 aa6.88□□□□□ -1.31
ZNF548-211ENST00000600927 Q6ZVQ6 151 aa6.88□□□□□ -1.31
ZNF548-211ENST00000600927 SSBP3-AS1Q7Z2R9 100 aa6.88□□□□□ -1.31
ZNF548-211ENST00000600927 CD164Q04900 197 aa6.83□□□□□ -1.32
ZNF548-211ENST00000600927 KRTAP10-8P60410 259 aa6.82□□□□□ -1.32
ZNF548-211ENST00000600927 C9orf153Q5TBE3 101 aa6.82□□□□□ -1.32
ZNF548-211ENST00000600927 IGLV9-49A0A0B4J1Y8 123 aa6.81□□□□□ -1.32
ZNF548-211ENST00000600927 SS18L2Q9UHA2 77 aa6.8□□□□□ -1.32
ZNF548-211ENST00000600927 A0A087WSZ3 146 aa6.79□□□□□ -1.32
ZNF548-211ENST00000600927 IGKV3D-7A0A0C4DH55 119 aa6.79□□□□□ -1.32
ZNF548-211ENST00000600927 BPY2O14599 106 aa6.79□□□□□ -1.32
ZNF548-211ENST00000600927 KRTAP1-4P0C5Y4 121 aa6.78□□□□□ -1.32
ZNF548-211ENST00000600927 MOBPQ13875 183 aa6.78□□□□□ -1.32
ZNF548-211ENST00000600927 J3KT08 172 aa6.76□□□□□ -1.33
ZNF548-211ENST00000600927 ANAPC11Q9NYG5 84 aa6.76□□□□□ -1.33
ZNF548-211ENST00000600927 UBR4Q5T4S7 5183 aa6.75□□□□□ -1.33
ZNF548-211ENST00000600927 HIST1H4AP62805 103 aaKnown RBP6.75□□□□□ -1.33
ZNF548-211ENST00000600927 Q5XG85 94 aa6.75□□□□□ -1.33
ZNF548-211ENST00000600927 A0A0G2JQZ4 141 aa6.74□□□□□ -1.33
ZNF548-211ENST00000600927 ASB16-AS1Q495Z4 193 aa6.74□□□□□ -1.33
ZNF548-211ENST00000600927 LINC00472Q9H8W2 130 aa6.74□□□□□ -1.33
ZNF548-211ENST00000600927 A0A087X002 238 aa6.72□□□□□ -1.33
ZNF548-211ENST00000600927 KRTAP13-2Q52LG2 175 aa6.72□□□□□ -1.33
ZNF548-211ENST00000600927 LRP2P98164 4655 aa6.71□□□□□ -1.33
ZNF548-211ENST00000600927 FAM236AA0A1B0GUQ0 79 aa6.71□□□□□ -1.34
ZNF548-211ENST00000600927 FAM236BA0A1B0GV22 79 aa6.71□□□□□ -1.34
ZNF548-211ENST00000600927 PCP4P48539 62 aa6.71□□□□□ -1.34
ZNF548-211ENST00000600927 ATOX1O00244 68 aa6.7□□□□□ -1.34
ZNF548-211ENST00000600927 DSCR10P59022 87 aa6.7□□□□□ -1.34
ZNF548-211ENST00000600927 SPAG11AQ6PDA7 123 aa6.7□□□□□ -1.34
ZNF548-211ENST00000600927 PRR26Q8N8Z3 221 aa6.7□□□□□ -1.34
ZNF548-211ENST00000600927 IGKV4-1P06312 121 aa6.69□□□□□ -1.34
ZNF548-211ENST00000600927 RPS29P62273 56 aaKnown RBP6.69□□□□□ -1.34
ZNF548-211ENST00000600927 TYMSOSQ8TAI1 123 aa6.69□□□□□ -1.34
ZNF548-211ENST00000600927 SPINK1P00995 79 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms