RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 C3orf22Q8N5N4 141 aa12.36□□□□□ -0.43
PNKP-214ENST00000600573 CIRBP-AS1Q8TBR5 109 aa12.36□□□□□ -0.43
PNKP-214ENST00000600573 PSORS1C2Q9UIG4 136 aa12.36□□□□□ -0.43
PNKP-214ENST00000600573 FAM30AQ9NZY2 134 aa12.35□□□□□ -0.43
PNKP-214ENST00000600573 RYR2Q92736 4967 aa12.34□□□□□ -0.43
PNKP-214ENST00000600573 F8WEM9 126 aa12.33□□□□□ -0.43
PNKP-214ENST00000600573 SPRR1BP22528 89 aa12.33□□□□□ -0.44
PNKP-214ENST00000600573 PKD1P98161 4303 aa12.32□□□□□ -0.44
PNKP-214ENST00000600573 C1orf137Q5JT78 98 aa12.32□□□□□ -0.44
PNKP-214ENST00000600573 SCXQ7RTU7 201 aa12.31□□□□□ -0.44
PNKP-214ENST00000600573 IGKV3D-7A0A0C4DH55 119 aa12.3□□□□□ -0.44
PNKP-214ENST00000600573 SMIM29Q86T20 159 aa12.3□□□□□ -0.44
PNKP-214ENST00000600573 ZNF861PO60384 105 aa12.29□□□□□ -0.44
PNKP-214ENST00000600573 ZNF706Q9Y5V0 76 aaPredicted RBP12.29□□□□□ -0.44
PNKP-214ENST00000600573 Q6ZVQ6 151 aa12.29□□□□□ -0.44
PNKP-214ENST00000600573 A0A1B0GVY2 172 aa12.28□□□□□ -0.44
PNKP-214ENST00000600573 A0A1B0GW54 56 aa12.26□□□□□ -0.45
PNKP-214ENST00000600573 IGLV7-43P04211 117 aa12.25□□□□□ -0.45
PNKP-214ENST00000600573 IGLV8-61A0A075B6I0 122 aa12.24□□□□□ -0.45
PNKP-214ENST00000600573 Q8NBF4 154 aa12.24□□□□□ -0.45
PNKP-214ENST00000600573 FAM236AA0A1B0GUQ0 79 aa12.22□□□□□ -0.45
PNKP-214ENST00000600573 FAM236BA0A1B0GV22 79 aa12.22□□□□□ -0.45
PNKP-214ENST00000600573 A0A1W2PNM2 257 aa12.22□□□□□ -0.45
PNKP-214ENST00000600573 ANAPC13Q9BS18 74 aa12.21□□□□□ -0.46
PNKP-214ENST00000600573 HAMPP81172 84 aa12.2□□□□□ -0.46
PNKP-214ENST00000600573 SPRR4Q96PI1 79 aa12.2□□□□□ -0.46
PNKP-214ENST00000600573 CXCL6P80162 114 aa12.19□□□□□ -0.46
PNKP-214ENST00000600573 LINC00483Q53H64 154 aa12.19□□□□□ -0.46
PNKP-214ENST00000600573 IGFL1Q6UW32 110 aa12.18□□□□□ -0.46
PNKP-214ENST00000600573 HIST1H4AP62805 103 aaKnown RBP12.17□□□□□ -0.46
PNKP-214ENST00000600573 NREPQ16612 68 aa12.16□□□□□ -0.46
PNKP-214ENST00000600573 RPL37AP61513 92 aaKnown RBP12.15□□□□□ -0.47
PNKP-214ENST00000600573 CRYGAP11844 174 aa12.13□□□□□ -0.47
PNKP-214ENST00000600573 A0A087WVE0 104 aa12.12□□□□□ -0.47
PNKP-214ENST00000600573 ATOX1O00244 68 aa12.08□□□□□ -0.48
PNKP-214ENST00000600573 LRP1BQ9NZR2 4599 aa12.08□□□□□ -0.48
PNKP-214ENST00000600573 DYNC1H1Q14204 4646 aaKnown RBP12.07□□□□□ -0.48
PNKP-214ENST00000600573 EPPK1P58107 5090 aaKnown RBP12.06□□□□□ -0.48
PNKP-214ENST00000600573 A0A0G2JQZ4 141 aa12.06□□□□□ -0.48
PNKP-214ENST00000600573 BPY2O14599 106 aa12.06□□□□□ -0.48
PNKP-214ENST00000600573 C9orf153Q5TBE3 101 aa12.03□□□□□ -0.48
PNKP-214ENST00000600573 IGLV9-49A0A0B4J1Y8 123 aa12.01□□□□□ -0.49
PNKP-214ENST00000600573 A0A087WSZ3 146 aa12□□□□□ -0.49
PNKP-214ENST00000600573 PKHD1P08F94 4074 aa12□□□□□ -0.49
PNKP-214ENST00000600573 FAM229BQ4G0N7 80 aa11.99□□□□□ -0.49
PNKP-214ENST00000600573 IGKV4-1P06312 121 aa11.97□□□□□ -0.49
PNKP-214ENST00000600573 SPINK6Q6UWN8 80 aa11.97□□□□□ -0.49
PNKP-214ENST00000600573 SSBP3-AS1Q7Z2R9 100 aa11.96□□□□□ -0.5
PNKP-214ENST00000600573 SRRM2Q9UQ35 2752 aaKnown RBP11.95□□□□□ -0.5
PNKP-214ENST00000600573 MOBPQ13875 183 aa11.94□□□□□ -0.5
PNKP-214ENST00000600573 BIRC6Q9NR09 4857 aa11.94□□□□□ -0.5
PNKP-214ENST00000600573 Q8N9L7 120 aa11.93□□□□□ -0.5
PNKP-214ENST00000600573 CCDC179H3BU77 68 aa11.93□□□□□ -0.5
PNKP-214ENST00000600573 ANAPC11Q9NYG5 84 aa11.93□□□□□ -0.5
PNKP-214ENST00000600573 COX7CP15954 63 aa11.9□□□□□ -0.5
PNKP-214ENST00000600573 SERP2Q8N6R1 65 aa11.9□□□□□ -0.5
PNKP-214ENST00000600573 UQCRQO14949 82 aa11.89□□□□□ -0.51
PNKP-214ENST00000600573 DSCR10P59022 87 aa11.89□□□□□ -0.51
PNKP-214ENST00000600573 APOBP04114 4563 aaKnown RBP11.89□□□□□ -0.51
PNKP-214ENST00000600573 VPS13BQ7Z7G8 4022 aa11.88□□□□□ -0.51
PNKP-214ENST00000600573 SMR3BP02814 79 aaPredicted RBP11.88□□□□□ -0.51
PNKP-214ENST00000600573 CD164Q04900 197 aa11.88□□□□□ -0.51
PNKP-214ENST00000600573 SMIM20Q8N5G0 67 aa11.88□□□□□ -0.51
PNKP-214ENST00000600573 CDK2AP2O75956 126 aa11.87□□□□□ -0.51
PNKP-214ENST00000600573 SS18L2Q9UHA2 77 aa11.86□□□□□ -0.51
PNKP-214ENST00000600573 KRTAP1-4P0C5Y4 121 aa11.85□□□□□ -0.51
PNKP-214ENST00000600573 K7EQZ3 153 aa11.84□□□□□ -0.51
PNKP-214ENST00000600573 PLA2G1BP04054 148 aaKnown RBP11.83□□□□□ -0.52
PNKP-214ENST00000600573 FAM229AH3BQW9 127 aa11.82□□□□□ -0.52
PNKP-214ENST00000600573 LINC00472Q9H8W2 130 aa11.82□□□□□ -0.52
PNKP-214ENST00000600573 TRAV7A0A075B6U4 112 aa11.82□□□□□ -0.52
PNKP-214ENST00000600573 DEFB116Q30KQ4 102 aa11.81□□□□□ -0.52
PNKP-214ENST00000600573 HRCT1Q6UXD1 115 aa11.81□□□□□ -0.52
PNKP-214ENST00000600573 J3KT08 172 aa11.8□□□□□ -0.52
PNKP-214ENST00000600573 KRTAP10-4P60372 401 aaPredicted RBP11.8□□□□□ -0.52
PNKP-214ENST00000600573 A0A087X002 238 aa11.79□□□□□ -0.52
PNKP-214ENST00000600573 KRTAP13-2Q52LG2 175 aa11.78□□□□□ -0.52
PNKP-214ENST00000600573 A8MWP4 228 aa11.75□□□□□ -0.53
PNKP-214ENST00000600573 HCG22E2RYF7 251 aa11.75□□□□□ -0.53
PNKP-214ENST00000600573 Q96NJ1 140 aa11.73□□□□□ -0.53
PNKP-214ENST00000600573 PRR15Q8IV56 129 aa11.72□□□□□ -0.53
PNKP-214ENST00000600573 TYMSOSQ8TAI1 123 aa11.72□□□□□ -0.53
PNKP-214ENST00000600573 ASB16-AS1Q495Z4 193 aa11.71□□□□□ -0.54
PNKP-214ENST00000600573 Q5XG85 94 aa11.71□□□□□ -0.54
PNKP-214ENST00000600573 C4orf48Q5BLP8 95 aa11.69□□□□□ -0.54
PNKP-214ENST00000600573 OCR1Q9BZK8 76 aa11.69□□□□□ -0.54
PNKP-214ENST00000600573 NDUFB1O75438 58 aa11.68□□□□□ -0.54
PNKP-214ENST00000600573 FAT1Q14517 4588 aa11.68□□□□□ -0.54
PNKP-214ENST00000600573 SPAG11AQ6PDA7 123 aa11.66□□□□□ -0.54
PNKP-214ENST00000600573 LIMD2Q9BT23 127 aa11.65□□□□□ -0.54
PNKP-214ENST00000600573 SPINK1P00995 79 aa11.64□□□□□ -0.55
PNKP-214ENST00000600573 Q5VSD8 79 aa11.64□□□□□ -0.55
PNKP-214ENST00000600573 WFDC13Q8IUB5 93 aa11.64□□□□□ -0.55
PNKP-214ENST00000600573 C20orf197Q8N268 126 aa11.64□□□□□ -0.55
PNKP-214ENST00000600573 RYR1P21817 5038 aa11.63□□□□□ -0.55
PNKP-214ENST00000600573 RPS29P62273 56 aaKnown RBP11.62□□□□□ -0.55
PNKP-214ENST00000600573 PRR26Q8N8Z3 221 aa11.62□□□□□ -0.55
PNKP-214ENST00000600573 KRTAP29-1A8MX34 341 aaPredicted RBP11.61□□□□□ -0.55
PNKP-214ENST00000600573 CASC2Q6XLA1 102 aa11.61□□□□□ -0.55
PNKP-214ENST00000600573 HSPG2P98160 4391 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms