RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 PHF5AQ7RTV0 110 aaKnown RBP9.53□□□□□ -0.88
VRK3-218ENST00000600031 C20orf197Q8N268 126 aa9.51□□□□□ -0.89
VRK3-218ENST00000600031 PRYO14603 147 aa9.5□□□□□ -0.89
VRK3-218ENST00000600031 EPM2AB3EWF7 344 aa9.5□□□□□ -0.89
VRK3-218ENST00000600031 KRTAP11-1Q8IUC1 163 aa9.49□□□□□ -0.89
VRK3-218ENST00000600031 SPRR1AP35321 89 aa9.49□□□□□ -0.89
VRK3-218ENST00000600031 LINC00336Q6ZUF6 198 aa9.49□□□□□ -0.89
VRK3-218ENST00000600031 KRTAP4-16G5E9R7 235 aaPredicted RBP9.48□□□□□ -0.89
VRK3-218ENST00000600031 DNAH8Q96JB1 4490 aa9.48□□□□□ -0.89
VRK3-218ENST00000600031 FAM30AQ9NZY2 134 aa9.47□□□□□ -0.89
VRK3-218ENST00000600031 DHRS4-AS1Q9P1J3 65 aa9.47□□□□□ -0.89
VRK3-218ENST00000600031 KRTAP10-1P60331 282 aa9.46□□□□□ -0.89
VRK3-218ENST00000600031 UBE2BP63146 152 aa9.46□□□□□ -0.89
VRK3-218ENST00000600031 KLKP1Q107X0 134 aa9.46□□□□□ -0.89
VRK3-218ENST00000600031 REG3GQ6UW15 175 aa9.46□□□□□ -0.89
VRK3-218ENST00000600031 SCXQ7RTU7 201 aa9.46□□□□□ -0.89
VRK3-218ENST00000600031 PLAC8Q9NZF1 115 aa9.46□□□□□ -0.89
VRK3-218ENST00000600031 NREPQ16612 68 aa9.45□□□□□ -0.9
VRK3-218ENST00000600031 Q8N377 158 aa9.45□□□□□ -0.9
VRK3-218ENST00000600031 IGLV5-48A0A075B6I7 105 aa9.44□□□□□ -0.9
VRK3-218ENST00000600031 A0A1B0GW54 56 aa9.44□□□□□ -0.9
VRK3-218ENST00000600031 PKHD1P08F94 4074 aa9.44□□□□□ -0.9
VRK3-218ENST00000600031 ETDCA0A1B0GVM5 59 aa9.44□□□□□ -0.9
VRK3-218ENST00000600031 Q6ZRX8 168 aa9.43□□□□□ -0.9
VRK3-218ENST00000600031 FAM236DA0A1B0GTK5 79 aa9.43□□□□□ -0.9
VRK3-218ENST00000600031 H7BZZ5 65 aa9.43□□□□□ -0.9
VRK3-218ENST00000600031 FAM236CP0DP71 79 aa9.43□□□□□ -0.9
VRK3-218ENST00000600031 DEFB105AQ8NG35 78 aa9.43□□□□□ -0.9
VRK3-218ENST00000600031 A0A1B0GVY2 172 aa9.41□□□□□ -0.9
VRK3-218ENST00000600031 Q6ZSA8 131 aa9.41□□□□□ -0.9
VRK3-218ENST00000600031 Q9BRP9 147 aa9.41□□□□□ -0.9
VRK3-218ENST00000600031 IGKV4-1P06312 121 aa9.4□□□□□ -0.91
VRK3-218ENST00000600031 BPY2O14599 106 aa9.39□□□□□ -0.91
VRK3-218ENST00000600031 NDUFC1O43677 76 aa9.39□□□□□ -0.91
VRK3-218ENST00000600031 OXTP01178 125 aa9.39□□□□□ -0.91
VRK3-218ENST00000600031 CIRBP-AS1Q8TBR5 109 aa9.39□□□□□ -0.91
VRK3-218ENST00000600031 RYR3Q15413 4870 aa9.39□□□□□ -0.91
VRK3-218ENST00000600031 ERC2-IT1O76042 136 aa9.38□□□□□ -0.91
VRK3-218ENST00000600031 PRLHP81277 87 aa9.37□□□□□ -0.91
VRK3-218ENST00000600031 LRP1BQ9NZR2 4599 aa9.37□□□□□ -0.91
VRK3-218ENST00000600031 SNURFQ9Y675 71 aa9.36□□□□□ -0.91
VRK3-218ENST00000600031 SERP1Q9Y6X1 66 aa9.36□□□□□ -0.91
VRK3-218ENST00000600031 Q8N9L7 120 aa9.34□□□□□ -0.91
VRK3-218ENST00000600031 PSORS1C2Q9UIG4 136 aa9.34□□□□□ -0.91
VRK3-218ENST00000600031 C1orf137Q5JT78 98 aa9.34□□□□□ -0.91
VRK3-218ENST00000600031 DYNC1H1Q14204 4646 aaKnown RBP9.33□□□□□ -0.92
VRK3-218ENST00000600031 A0A1W2PNM2 257 aa9.33□□□□□ -0.92
VRK3-218ENST00000600031 F8WEM9 126 aa9.33□□□□□ -0.92
VRK3-218ENST00000600031 Q8NBF4 154 aa9.32□□□□□ -0.92
VRK3-218ENST00000600031 H0Y9J4 135 aa9.32□□□□□ -0.92
VRK3-218ENST00000600031 UBE2AP49459 152 aa9.32□□□□□ -0.92
VRK3-218ENST00000600031 ATP5EP56381 51 aaPredicted RBP9.32□□□□□ -0.92
VRK3-218ENST00000600031 C5orf47Q569G3 176 aa9.32□□□□□ -0.92
VRK3-218ENST00000600031 ST20-AS1Q8NBB2 130 aa9.32□□□□□ -0.92
VRK3-218ENST00000600031 KRTAP13-1Q8IUC0 172 aa9.31□□□□□ -0.92
VRK3-218ENST00000600031 TMEM254Q8TBM7 123 aa9.31□□□□□ -0.92
VRK3-218ENST00000600031 SPRR4Q96PI1 79 aa9.31□□□□□ -0.92
VRK3-218ENST00000600031 HIGD2AQ9BW72 106 aa9.31□□□□□ -0.92
VRK3-218ENST00000600031 OCR1Q9BZK8 76 aa9.31□□□□□ -0.92
VRK3-218ENST00000600031 Q5XG85 94 aa9.29□□□□□ -0.92
VRK3-218ENST00000600031 SRRM2Q9UQ35 2752 aaKnown RBP9.28□□□□□ -0.92
VRK3-218ENST00000600031 A0A0U1RQV1 116 aa9.25□□□□□ -0.93
VRK3-218ENST00000600031 SMIM29Q86T20 159 aa9.24□□□□□ -0.93
VRK3-218ENST00000600031 C4orf26Q17RF5 130 aa9.23□□□□□ -0.93
VRK3-218ENST00000600031 APOBP04114 4563 aaKnown RBP9.23□□□□□ -0.93
VRK3-218ENST00000600031 ZNF861PO60384 105 aa9.22□□□□□ -0.93
VRK3-218ENST00000600031 IGLV7-43P04211 117 aa9.22□□□□□ -0.93
VRK3-218ENST00000600031 VPS13BQ7Z7G8 4022 aa9.22□□□□□ -0.93
VRK3-218ENST00000600031 SMIM26A0A096LP01 95 aa9.21□□□□□ -0.94
VRK3-218ENST00000600031 DSCR10P59022 87 aa9.2□□□□□ -0.94
VRK3-218ENST00000600031 IGLV8-61A0A075B6I0 122 aa9.19□□□□□ -0.94
VRK3-218ENST00000600031 HRCT1Q6UXD1 115 aa9.18□□□□□ -0.94
VRK3-218ENST00000600031 IGFL1Q6UW32 110 aa9.17□□□□□ -0.94
VRK3-218ENST00000600031 K7EQZ3 153 aa9.16□□□□□ -0.94
VRK3-218ENST00000600031 SPRR1BP22528 89 aa9.16□□□□□ -0.94
VRK3-218ENST00000600031 SMR3BP02814 79 aaPredicted RBP9.15□□□□□ -0.94
VRK3-218ENST00000600031 HCG22E2RYF7 251 aa9.13□□□□□ -0.95
VRK3-218ENST00000600031 FP248Q71RG6 208 aaPredicted RBP9.11□□□□□ -0.95
VRK3-218ENST00000600031 LINC00483Q53H64 154 aa9.11□□□□□ -0.95
VRK3-218ENST00000600031 ZNF706Q9Y5V0 76 aaPredicted RBP9.11□□□□□ -0.95
VRK3-218ENST00000600031 RPL37AP61513 92 aaKnown RBP9.1□□□□□ -0.95
VRK3-218ENST00000600031 FAT1Q14517 4588 aa9.1□□□□□ -0.95
VRK3-218ENST00000600031 ANAPC11Q9NYG5 84 aa9.1□□□□□ -0.95
VRK3-218ENST00000600031 A0A087WSZ3 146 aa9.08□□□□□ -0.96
VRK3-218ENST00000600031 ZCCHC13Q8WW36 166 aaKnown RBP9.08□□□□□ -0.96
VRK3-218ENST00000600031 A0A0G2JQZ4 141 aa9.08□□□□□ -0.96
VRK3-218ENST00000600031 EPPK1P58107 5090 aaKnown RBP9.06□□□□□ -0.96
VRK3-218ENST00000600031 HSPG2P98160 4391 aa9.04□□□□□ -0.96
VRK3-218ENST00000600031 IGLV9-49A0A0B4J1Y8 123 aa9.04□□□□□ -0.96
VRK3-218ENST00000600031 KRTAP10-4P60372 401 aaPredicted RBP9.04□□□□□ -0.96
VRK3-218ENST00000600031 DEFB116Q30KQ4 102 aa9.03□□□□□ -0.96
VRK3-218ENST00000600031 CDK2AP2O75956 126 aa9.02□□□□□ -0.97
VRK3-218ENST00000600031 FAM229BQ4G0N7 80 aa9.01□□□□□ -0.97
VRK3-218ENST00000600031 WFDC13Q8IUB5 93 aa9.01□□□□□ -0.97
VRK3-218ENST00000600031 RYR1P21817 5038 aa9□□□□□ -0.97
VRK3-218ENST00000600031 NDUFB1O75438 58 aa9□□□□□ -0.97
VRK3-218ENST00000600031 KRTAP29-1A8MX34 341 aaPredicted RBP8.99□□□□□ -0.97
VRK3-218ENST00000600031 SPINK6Q6UWN8 80 aa8.99□□□□□ -0.97
VRK3-218ENST00000600031 KRTAP1-4P0C5Y4 121 aa8.99□□□□□ -0.97
VRK3-218ENST00000600031 MP68P56378 58 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms