RNA–Protein interactions for RNA: ENST00000596672.5

LIG1-213, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-213ENST00000596672 C3orf22Q8N5N4 141 aa6.06□□□□□ -1.44
LIG1-213ENST00000596672 TRIAP1O43715 76 aa6.05□□□□□ -1.44
LIG1-213ENST00000596672 FAM19A1Q7Z5A9 133 aa6.05□□□□□ -1.44
LIG1-213ENST00000596672 KRTAP4-16G5E9R7 235 aaPredicted RBP6.04□□□□□ -1.44
LIG1-213ENST00000596672 LST1O00453 97 aa6.04□□□□□ -1.44
LIG1-213ENST00000596672 FAM229BQ4G0N7 80 aa6.04□□□□□ -1.44
LIG1-213ENST00000596672 S100A7L2Q5SY68 101 aa6.04□□□□□ -1.44
LIG1-213ENST00000596672 SMIM11BQ8TCY0 68 aa6.04□□□□□ -1.44
LIG1-213ENST00000596672 FAM240AA0A1B0GVK7 77 aa6.03□□□□□ -1.44
LIG1-213ENST00000596672 SNCGO76070 127 aa6.03□□□□□ -1.44
LIG1-213ENST00000596672 Q6Q795 121 aa6.03□□□□□ -1.44
LIG1-213ENST00000596672 ACYP1P07311 99 aa6.02□□□□□ -1.45
LIG1-213ENST00000596672 TRBV10-3A0A0K0K1G6 114 aa6.01□□□□□ -1.45
LIG1-213ENST00000596672 MT-ATP8P03928 68 aa6.01□□□□□ -1.45
LIG1-213ENST00000596672 SPRR1AP35321 89 aa6.01□□□□□ -1.45
LIG1-213ENST00000596672 LINC00304Q8N9R0 145 aa6.01□□□□□ -1.45
LIG1-213ENST00000596672 CLEC2BQ92478 149 aa6.01□□□□□ -1.45
LIG1-213ENST00000596672 SPRR4Q96PI1 79 aa6.01□□□□□ -1.45
LIG1-213ENST00000596672 IGLV6-57P01721 117 aa6□□□□□ -1.45
LIG1-213ENST00000596672 TRACP01848 142 aa6□□□□□ -1.45
LIG1-213ENST00000596672 HIGD2AQ9BW72 106 aa6□□□□□ -1.45
LIG1-213ENST00000596672 ERC2-IT1O76042 136 aa5.99□□□□□ -1.45
LIG1-213ENST00000596672 SMCR5Q8TEV8 140 aa5.99□□□□□ -1.45
LIG1-213ENST00000596672 KCNQ1DNQ9H478 68 aa5.99□□□□□ -1.45
LIG1-213ENST00000596672 TRAV23DV6A0A075B6W5 121 aa5.97□□□□□ -1.45
LIG1-213ENST00000596672 C6orf99Q4VX62 202 aa5.97□□□□□ -1.45
LIG1-213ENST00000596672 ANAPC13Q9BS18 74 aa5.97□□□□□ -1.45
LIG1-213ENST00000596672 TEX49A0A1B0GTD5 131 aa5.96□□□□□ -1.46
LIG1-213ENST00000596672 H0YGX0 51 aa5.96□□□□□ -1.46
LIG1-213ENST00000596672 LCE2AQ5TA79 106 aaPredicted RBP5.96□□□□□ -1.46
LIG1-213ENST00000596672 FAM218AQ96MZ4 157 aa5.96□□□□□ -1.46
LIG1-213ENST00000596672 B5MCH6 92 aa5.95□□□□□ -1.46
LIG1-213ENST00000596672 PRYO14603 147 aa5.95□□□□□ -1.46
LIG1-213ENST00000596672 ZNF73O43830 326 aaPredicted RBP5.95□□□□□ -1.46
LIG1-213ENST00000596672 Q9BRP9 147 aa5.95□□□□□ -1.46
LIG1-213ENST00000596672 IMUPQ9GZP8 106 aa5.95□□□□□ -1.46
LIG1-213ENST00000596672 IGLV7-46A0A075B6I9 117 aa5.94□□□□□ -1.46
LIG1-213ENST00000596672 BAALC-AS2P0C853 105 aa5.93□□□□□ -1.46
LIG1-213ENST00000596672 COX7BP24311 80 aa5.93□□□□□ -1.46
LIG1-213ENST00000596672 TPRXLQ17RH7 258 aa5.93□□□□□ -1.46
LIG1-213ENST00000596672 LINC00483Q53H64 154 aa5.93□□□□□ -1.46
LIG1-213ENST00000596672 Q8NBF4 154 aa5.93□□□□□ -1.46
LIG1-213ENST00000596672 TRBV7-7A0A0K0K1E9 115 aa5.92□□□□□ -1.46
LIG1-213ENST00000596672 DNAL4O96015 105 aa5.92□□□□□ -1.46
LIG1-213ENST00000596672 NDUFV3P56181 108 aaKnown RBP5.92□□□□□ -1.46
LIG1-213ENST00000596672 KRTAP4-1Q9BYQ7 146 aa5.92□□□□□ -1.46
LIG1-213ENST00000596672 LINC00575Q6W349 94 aa5.91□□□□□ -1.46
LIG1-213ENST00000596672 LINC00643Q86TS7 51 aa5.91□□□□□ -1.46
LIG1-213ENST00000596672 TRBV7-6A0A0J9YX20 115 aa5.9□□□□□ -1.46
LIG1-213ENST00000596672 ETDCA0A1B0GVM5 59 aa5.9□□□□□ -1.46
LIG1-213ENST00000596672 A0A1B0GX51 115 aa5.9□□□□□ -1.46
LIG1-213ENST00000596672 KRTAP13-3Q3SY46 172 aa5.9□□□□□ -1.46
LIG1-213ENST00000596672 GAGE2AQ6NT46 116 aa5.9□□□□□ -1.46
LIG1-213ENST00000596672 hADV29S1A0JD25 119 aa5.89□□□□□ -1.47
LIG1-213ENST00000596672 ELOF1P60002 83 aaKnown RBP5.89□□□□□ -1.47
LIG1-213ENST00000596672 ST20-AS1Q8NBB2 130 aa5.89□□□□□ -1.47
LIG1-213ENST00000596672 Q6ZRX8 168 aa5.88□□□□□ -1.47
LIG1-213ENST00000596672 MOBPQ13875 183 aa5.87□□□□□ -1.47
LIG1-213ENST00000596672 SPAG11AQ6PDA7 123 aa5.87□□□□□ -1.47
LIG1-213ENST00000596672 ZNF706Q9Y5V0 76 aaPredicted RBP5.87□□□□□ -1.47
LIG1-213ENST00000596672 IGLV9-49A0A0B4J1Y8 123 aa5.85□□□□□ -1.47
LIG1-213ENST00000596672 H3BQ85 93 aa5.85□□□□□ -1.47
LIG1-213ENST00000596672 Q8N377 158 aa5.85□□□□□ -1.47
LIG1-213ENST00000596672 ORMDL1Q9P0S3 153 aa5.85□□□□□ -1.47
LIG1-213ENST00000596672 Q6ZQY7 126 aa5.84□□□□□ -1.47
LIG1-213ENST00000596672 KRTAP9-2Q9BYQ4 174 aa5.84□□□□□ -1.47
LIG1-213ENST00000596672 DHRS4-AS1Q9P1J3 65 aa5.84□□□□□ -1.47
LIG1-213ENST00000596672 JMJD7-PLA2G4BH0Y9G9 81 aa5.83□□□□□ -1.48
LIG1-213ENST00000596672 FP248Q71RG6 208 aaPredicted RBP5.83□□□□□ -1.48
LIG1-213ENST00000596672 OBSCN-AS1Q96MR7 158 aa5.83□□□□□ -1.48
LIG1-213ENST00000596672 SPINK1P00995 79 aa5.82□□□□□ -1.48
LIG1-213ENST00000596672 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.82□□□□□ -1.48
LIG1-213ENST00000596672 DEFB105AQ8NG35 78 aa5.82□□□□□ -1.48
LIG1-213ENST00000596672 TMEM256-PLSCR3K7ERE1 68 aa5.81□□□□□ -1.48
LIG1-213ENST00000596672 GHRHP01286 108 aa5.81□□□□□ -1.48
LIG1-213ENST00000596672 C4orf48Q5BLP8 95 aa5.81□□□□□ -1.48
LIG1-213ENST00000596672 SSBP3-AS1Q7Z2R9 100 aa5.81□□□□□ -1.48
LIG1-213ENST00000596672 ASB16-AS1Q495Z4 193 aa5.8□□□□□ -1.48
LIG1-213ENST00000596672 Q6JHZ5 121 aa5.8□□□□□ -1.48
LIG1-213ENST00000596672 FAM236AA0A1B0GUQ0 79 aa5.79□□□□□ -1.48
LIG1-213ENST00000596672 FAM236BA0A1B0GV22 79 aa5.79□□□□□ -1.48
LIG1-213ENST00000596672 ATOX1O00244 68 aa5.79□□□□□ -1.48
LIG1-213ENST00000596672 SPRR1BP22528 89 aa5.79□□□□□ -1.48
LIG1-213ENST00000596672 ATP5EP2Q5VTU8 51 aa5.79□□□□□ -1.48
LIG1-213ENST00000596672 CCDC179H3BU77 68 aa5.78□□□□□ -1.48
LIG1-213ENST00000596672 UQCRQO14949 82 aa5.78□□□□□ -1.48
LIG1-213ENST00000596672 CCKP06307 115 aa5.78□□□□□ -1.48
LIG1-213ENST00000596672 RPS29P62273 56 aaKnown RBP5.78□□□□□ -1.48
LIG1-213ENST00000596672 LAMTOR3Q9UHA4 124 aa5.78□□□□□ -1.48
LIG1-213ENST00000596672 LINC01547P58512 204 aaPredicted RBP5.77□□□□□ -1.49
LIG1-213ENST00000596672 KRTAP19-2Q3LHN2 52 aa5.77□□□□□ -1.49
LIG1-213ENST00000596672 LCE2CQ5TA81 110 aa5.77□□□□□ -1.49
LIG1-213ENST00000596672 A0A0G2JQZ4 141 aa5.76□□□□□ -1.49
LIG1-213ENST00000596672 A0A0U1RQV1 116 aa5.76□□□□□ -1.49
LIG1-213ENST00000596672 PDE6GP18545 87 aa5.76□□□□□ -1.49
LIG1-213ENST00000596672 XP32Q5T750 250 aa5.76□□□□□ -1.49
LIG1-213ENST00000596672 C9orf153Q5TBE3 101 aa5.76□□□□□ -1.49
LIG1-213ENST00000596672 SMIM29Q86T20 159 aa5.76□□□□□ -1.49
LIG1-213ENST00000596672 C14orf132Q9NPU4 83 aa5.76□□□□□ -1.49
LIG1-213ENST00000596672 IGLV5-48A0A075B6I7 105 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms