RNA–Protein interactions for RNA: ENST00000596365.5

LINC00649-208, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 682 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-208ENST00000596365 SPANXB1Q9NS25 103 aaPredicted RBP4.56□□□□□ -1.68
LINC00649-208ENST00000596365 LEPROTO15243 131 aa4.55□□□□□ -1.68
LINC00649-208ENST00000596365 LGALS3P17931 250 aaKnown RBP4.55□□□□□ -1.68
LINC00649-208ENST00000596365 TSPEAR-AS2P59090 65 aa4.55□□□□□ -1.68
LINC00649-208ENST00000596365 LYRM7Q5U5X0 104 aa4.55□□□□□ -1.68
LINC00649-208ENST00000596365 TMEM223A0PJW6 202 aa4.54□□□□□ -1.68
LINC00649-208ENST00000596365 F8W1H4 67 aa4.54□□□□□ -1.68
LINC00649-208ENST00000596365 J3QQQ9 107 aa4.54□□□□□ -1.68
LINC00649-208ENST00000596365 ZNF22P17026 224 aaPredicted RBP4.54□□□□□ -1.68
LINC00649-208ENST00000596365 RPL24P83731 157 aaKnown RBP4.54□□□□□ -1.68
LINC00649-208ENST00000596365 AMELXQ99217 191 aa4.54□□□□□ -1.68
LINC00649-208ENST00000596365 HERVK_113P63121 156 aa4.53□□□□□ -1.68
LINC00649-208ENST00000596365 SSBP3-AS1Q7Z2R9 100 aa4.53□□□□□ -1.68
LINC00649-208ENST00000596365 FAM19A3Q7Z5A8 133 aa4.53□□□□□ -1.68
LINC00649-208ENST00000596365 VCX2Q9H322 139 aa4.53□□□□□ -1.68
LINC00649-208ENST00000596365 PRO0461Q9UI25 63 aa4.53□□□□□ -1.68
LINC00649-208ENST00000596365 C9orf92A6NGG3 77 aa4.52□□□□□ -1.69
LINC00649-208ENST00000596365 H3BMG7 143 aa4.52□□□□□ -1.69
LINC00649-208ENST00000596365 J3QR89 54 aa4.52□□□□□ -1.69
LINC00649-208ENST00000596365 VPREB1P12018 145 aa4.52□□□□□ -1.69
LINC00649-208ENST00000596365 MOBPQ13875 183 aa4.52□□□□□ -1.69
LINC00649-208ENST00000596365 CDKN2A-AS1Q9UH64 79 aa4.52□□□□□ -1.69
LINC00649-208ENST00000596365 LINC00483Q53H64 154 aa4.51□□□□□ -1.69
LINC00649-208ENST00000596365 COX7B2Q8TF08 81 aa4.51□□□□□ -1.69
LINC00649-208ENST00000596365 IGLV9-49A0A0B4J1Y8 123 aa4.5□□□□□ -1.69
LINC00649-208ENST00000596365 A0A0B4J2C4 111 aa4.5□□□□□ -1.69
LINC00649-208ENST00000596365 LOC107984156A0A0G2JMH3 177 aa4.5□□□□□ -1.69
LINC00649-208ENST00000596365 PSMB2P49721 201 aa4.5□□□□□ -1.69
LINC00649-208ENST00000596365 ARL17AQ8IVW1 177 aa4.5□□□□□ -1.69
LINC00649-208ENST00000596365 MTURNQ8N3F0 131 aa4.5□□□□□ -1.69
LINC00649-208ENST00000596365 LINC00846Q9NV44 126 aa4.5□□□□□ -1.69
LINC00649-208ENST00000596365 TRBV20-1A0A075B6N2 111 aa4.49□□□□□ -1.69
LINC00649-208ENST00000596365 A0A0J9YXY3 114 aa4.49□□□□□ -1.69
LINC00649-208ENST00000596365 TINCRA0A1B0GVN0 87 aa4.49□□□□□ -1.69
LINC00649-208ENST00000596365 SMIM1B2RUZ4 78 aa4.49□□□□□ -1.69
LINC00649-208ENST00000596365 ETDBQ3ZM63 59 aa4.49□□□□□ -1.69
LINC00649-208ENST00000596365 SMCR5Q8TEV8 140 aa4.49□□□□□ -1.69
LINC00649-208ENST00000596365 PRO1854Q9UHT4 67 aa4.49□□□□□ -1.69
LINC00649-208ENST00000596365 A4D1N5 150 aa4.48□□□□□ -1.69
LINC00649-208ENST00000596365 TCL1BO95988 128 aa4.48□□□□□ -1.69
LINC00649-208ENST00000596365 KRTAP6-3Q3LI67 103 aa4.48□□□□□ -1.69
LINC00649-208ENST00000596365 GAGE2AQ6NT46 116 aa4.48□□□□□ -1.69
LINC00649-208ENST00000596365 SPANXDQ9BXN6 97 aa4.48□□□□□ -1.69
LINC00649-208ENST00000596365 SPANXCQ9NY87 97 aa4.48□□□□□ -1.69
LINC00649-208ENST00000596365 TIMM17BO60830 172 aa4.47□□□□□ -1.69
LINC00649-208ENST00000596365 SCGB1A1P11684 91 aa4.47□□□□□ -1.69
LINC00649-208ENST00000596365 PFN2P35080 140 aa4.47□□□□□ -1.69
LINC00649-208ENST00000596365 SFTA2Q6UW10 78 aa4.47□□□□□ -1.69
LINC00649-208ENST00000596365 MUSTN1Q8IVN3 82 aa4.47□□□□□ -1.69
LINC00649-208ENST00000596365 LITAFQ99732 161 aa4.47□□□□□ -1.69
LINC00649-208ENST00000596365 SND1-IT1Q9HBX3 110 aa4.47□□□□□ -1.69
LINC00649-208ENST00000596365 ERG28Q9UKR5 140 aa4.47□□□□□ -1.69
LINC00649-208ENST00000596365 IGLV5-45A0A087WSX0 123 aa4.46□□□□□ -1.7
LINC00649-208ENST00000596365 IGLV6-57P01721 117 aa4.46□□□□□ -1.7
LINC00649-208ENST00000596365 SPINK8P0C7L1 97 aa4.46□□□□□ -1.7
LINC00649-208ENST00000596365 SCGB1C2P0DMR2 95 aa4.46□□□□□ -1.7
LINC00649-208ENST00000596365 Q6Q795 121 aa4.46□□□□□ -1.7
LINC00649-208ENST00000596365 TEN1Q86WV5 123 aa4.46□□□□□ -1.7
LINC00649-208ENST00000596365 PPDPFLQ8WWR9 84 aa4.46□□□□□ -1.7
LINC00649-208ENST00000596365 SIGMAR1Q99720 223 aa4.46□□□□□ -1.7
LINC00649-208ENST00000596365 Q1RN00 199 aa4.45□□□□□ -1.7
LINC00649-208ENST00000596365 ETDCA0A1B0GVM5 59 aa4.44□□□□□ -1.7
LINC00649-208ENST00000596365 H7C2G1 150 aa4.44□□□□□ -1.7
LINC00649-208ENST00000596365 PRYO14603 147 aa4.44□□□□□ -1.7
LINC00649-208ENST00000596365 IFITM1P13164 125 aa4.44□□□□□ -1.7
LINC00649-208ENST00000596365 RPL37P61927 97 aaKnown RBP4.44□□□□□ -1.7
LINC00649-208ENST00000596365 ATXN8Q156A1 80 aa4.44□□□□□ -1.7
LINC00649-208ENST00000596365 ANKRD29Q8N6D5 301 aa4.44□□□□□ -1.7
LINC00649-208ENST00000596365 Q8NDZ9 215 aa4.44□□□□□ -1.7
LINC00649-208ENST00000596365 LIMD2Q9BT23 127 aa4.44□□□□□ -1.7
LINC00649-208ENST00000596365 IGLV5-39A0A0G2JS06 123 aa4.43□□□□□ -1.7
LINC00649-208ENST00000596365 C9JAW5 83 aa4.43□□□□□ -1.7
LINC00649-208ENST00000596365 COX17Q14061 63 aa4.43□□□□□ -1.7
LINC00649-208ENST00000596365 ADAMTSL4-AS1Q5T5F5 129 aa4.43□□□□□ -1.7
LINC00649-208ENST00000596365 C9orf153Q5TBE3 101 aa4.43□□□□□ -1.7
LINC00649-208ENST00000596365 NEBP20929 6669 aa4.42□□□□□ -1.7
LINC00649-208ENST00000596365 SPRR1AP35321 89 aa4.42□□□□□ -1.7
LINC00649-208ENST00000596365 MPLKIPQ8TAP9 179 aa4.42□□□□□ -1.7
LINC00649-208ENST00000596365 TRBV10-2A0A0K0K1G8 114 aa4.41□□□□□ -1.7
LINC00649-208ENST00000596365 NPC2P61916 151 aa4.41□□□□□ -1.7
LINC00649-208ENST00000596365 COPS9Q8WXC6 57 aa4.41□□□□□ -1.7
LINC00649-208ENST00000596365 H3BT86 120 aa4.4□□□□□ -1.71
LINC00649-208ENST00000596365 MT2AP02795 61 aa4.4□□□□□ -1.71
LINC00649-208ENST00000596365 COX6CP09669 75 aa4.4□□□□□ -1.71
LINC00649-208ENST00000596365 HERV-K104P63124 156 aa4.4□□□□□ -1.71
LINC00649-208ENST00000596365 KCNQ1DNQ9H478 68 aa4.4□□□□□ -1.71
LINC00649-208ENST00000596365 ERC2-IT1O76042 136 aa4.39□□□□□ -1.71
LINC00649-208ENST00000596365 KRTAP19-6Q3LI70 58 aa4.39□□□□□ -1.71
LINC00649-208ENST00000596365 LINC00308Q8TCZ7 52 aa4.39□□□□□ -1.71
LINC00649-208ENST00000596365 ZNF625Q96I27 306 aaPredicted RBP4.39□□□□□ -1.71
LINC00649-208ENST00000596365 IGKV2D-30A0A075B6S6 120 aa4.38□□□□□ -1.71
LINC00649-208ENST00000596365 A0A1B0GV72 72 aa4.38□□□□□ -1.71
LINC00649-208ENST00000596365 LST1O00453 97 aa4.38□□□□□ -1.71
LINC00649-208ENST00000596365 MT-ATP8P03928 68 aa4.38□□□□□ -1.71
LINC00649-208ENST00000596365 MEIG1Q5JSS6 88 aa4.38□□□□□ -1.71
LINC00649-208ENST00000596365 CLEC2BQ92478 149 aa4.38□□□□□ -1.71
LINC00649-208ENST00000596365 KRTAP20-1Q3LI63 56 aa4.37□□□□□ -1.71
LINC00649-208ENST00000596365 HRCT1Q6UXD1 115 aa4.37□□□□□ -1.71
LINC00649-208ENST00000596365 SOSTDC1Q6X4U4 206 aa4.37□□□□□ -1.71
LINC00649-208ENST00000596365 A0A0U1RRA0 63 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms