RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 C3orf84H3BNL1 204 aa10.91□□□□□ -0.66
SHKBP1-205ENST00000594973 PSPHP1O15172 72 aa10.9□□□□□ -0.66
SHKBP1-205ENST00000594973 IGLV5-48A0A075B6I7 105 aa10.9□□□□□ -0.67
SHKBP1-205ENST00000594973 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.89□□□□□ -0.67
SHKBP1-205ENST00000594973 KRTAP7-1Q8IUC3 87 aa10.89□□□□□ -0.67
SHKBP1-205ENST00000594973 KCNQ1DNQ9H478 68 aa10.89□□□□□ -0.67
SHKBP1-205ENST00000594973 PLA2G2DQ9UNK4 145 aa10.89□□□□□ -0.67
SHKBP1-205ENST00000594973 NDUFB1O75438 58 aa10.86□□□□□ -0.67
SHKBP1-205ENST00000594973 IGKV2-24A0A0C4DH68 120 aa10.86□□□□□ -0.67
SHKBP1-205ENST00000594973 NBDYA0A0U1RRE5 68 aa10.85□□□□□ -0.67
SHKBP1-205ENST00000594973 IGLV1-50A0A075B6I6 118 aa10.84□□□□□ -0.67
SHKBP1-205ENST00000594973 MRPL55Q7Z7F7 128 aaKnown RBP10.84□□□□□ -0.67
SHKBP1-205ENST00000594973 IGLV5-37A0A075B6J1 123 aa10.84□□□□□ -0.67
SHKBP1-205ENST00000594973 A0A096LNI7 61 aa10.84□□□□□ -0.67
SHKBP1-205ENST00000594973 CNBPP62633 177 aaKnown RBP10.83□□□□□ -0.68
SHKBP1-205ENST00000594973 UBE2BP63146 152 aa10.83□□□□□ -0.68
SHKBP1-205ENST00000594973 Q8N377 158 aa10.81□□□□□ -0.68
SHKBP1-205ENST00000594973 A8MUN3 132 aa10.81□□□□□ -0.68
SHKBP1-205ENST00000594973 DEFB105AQ8NG35 78 aa10.8□□□□□ -0.68
SHKBP1-205ENST00000594973 A0A1W2PNM2 257 aa10.79□□□□□ -0.68
SHKBP1-205ENST00000594973 C16orf90A8MZG2 172 aa10.79□□□□□ -0.68
SHKBP1-205ENST00000594973 Q5VV11 94 aa10.79□□□□□ -0.68
SHKBP1-205ENST00000594973 VPS13DQ5THJ4 4388 aa10.79□□□□□ -0.68
SHKBP1-205ENST00000594973 C14orf177Q52M58 125 aa10.79□□□□□ -0.68
SHKBP1-205ENST00000594973 UBE2AP49459 152 aa10.78□□□□□ -0.68
SHKBP1-205ENST00000594973 DSCR10P59022 87 aa10.78□□□□□ -0.68
SHKBP1-205ENST00000594973 Q6ZRX8 168 aa10.78□□□□□ -0.68
SHKBP1-205ENST00000594973 KRTAP4-16G5E9R7 235 aaPredicted RBP10.78□□□□□ -0.68
SHKBP1-205ENST00000594973 FBN3Q75N90 2809 aa10.77□□□□□ -0.68
SHKBP1-205ENST00000594973 A0A1W2PNN7 141 aa10.77□□□□□ -0.69
SHKBP1-205ENST00000594973 Q9BRP9 147 aa10.77□□□□□ -0.69
SHKBP1-205ENST00000594973 KMT2AQ03164 3969 aa10.77□□□□□ -0.69
SHKBP1-205ENST00000594973 CHTF8P0CG12 524 aa10.76□□□□□ -0.69
SHKBP1-205ENST00000594973 Q8NBF4 154 aa10.76□□□□□ -0.69
SHKBP1-205ENST00000594973 SPRR4Q96PI1 79 aa10.76□□□□□ -0.69
SHKBP1-205ENST00000594973 SPRR1AP35321 89 aa10.76□□□□□ -0.69
SHKBP1-205ENST00000594973 LIMD2Q9BT23 127 aa10.76□□□□□ -0.69
SHKBP1-205ENST00000594973 TGP01266 2768 aa10.76□□□□□ -0.69
SHKBP1-205ENST00000594973 KTN1-AS1Q86SY8 53 aa10.75□□□□□ -0.69
SHKBP1-205ENST00000594973 ST20-AS1Q8NBB2 130 aa10.75□□□□□ -0.69
SHKBP1-205ENST00000594973 TNP2Q05952 138 aa10.75□□□□□ -0.69
SHKBP1-205ENST00000594973 Q6ZRN7 208 aaPredicted RBP10.75□□□□□ -0.69
SHKBP1-205ENST00000594973 HCG22E2RYF7 251 aa10.74□□□□□ -0.69
SHKBP1-205ENST00000594973 DHRS4-AS1Q9P1J3 65 aa10.74□□□□□ -0.69
SHKBP1-205ENST00000594973 C1orf137Q5JT78 98 aa10.74□□□□□ -0.69
SHKBP1-205ENST00000594973 K7EQZ3 153 aa10.73□□□□□ -0.69
SHKBP1-205ENST00000594973 KRTAP21-3Q3LHN1 58 aa10.73□□□□□ -0.69
SHKBP1-205ENST00000594973 REG3GQ6UW15 175 aa10.73□□□□□ -0.69
SHKBP1-205ENST00000594973 PRR4Q16378 134 aa10.73□□□□□ -0.69
SHKBP1-205ENST00000594973 SPANXA2-OT1Q8N9U9 137 aa10.73□□□□□ -0.69
SHKBP1-205ENST00000594973 MP68P56378 58 aa10.72□□□□□ -0.69
SHKBP1-205ENST00000594973 C9orf163Q8N9P6 203 aa10.7□□□□□ -0.7
SHKBP1-205ENST00000594973 Q8N9P0 234 aaPredicted RBP10.7□□□□□ -0.7
SHKBP1-205ENST00000594973 DNAH2Q9P225 4427 aa10.69□□□□□ -0.7
SHKBP1-205ENST00000594973 CHKB-CPT1BH3BT56 60 aa10.69□□□□□ -0.7
SHKBP1-205ENST00000594973 A8MU10 97 aa10.68□□□□□ -0.7
SHKBP1-205ENST00000594973 ATP11AUNQ6ZP68 121 aa10.68□□□□□ -0.7
SHKBP1-205ENST00000594973 PHF5AQ7RTV0 110 aaKnown RBP10.68□□□□□ -0.7
SHKBP1-205ENST00000594973 HECTD4Q9Y4D8 3996 aa10.67□□□□□ -0.7
SHKBP1-205ENST00000594973 H3BPC8 53 aa10.67□□□□□ -0.7
SHKBP1-205ENST00000594973 NDUFS5O43920 106 aa10.67□□□□□ -0.7
SHKBP1-205ENST00000594973 PRLHP81277 87 aa10.66□□□□□ -0.7
SHKBP1-205ENST00000594973 LINC00208Q96KT6 92 aa10.66□□□□□ -0.7
SHKBP1-205ENST00000594973 SRRM2Q9UQ35 2752 aaKnown RBP10.66□□□□□ -0.7
SHKBP1-205ENST00000594973 RBM12B-AS1Q9P1G2 102 aa10.66□□□□□ -0.7
SHKBP1-205ENST00000594973 PANO1I0J062 215 aa10.64□□□□□ -0.71
SHKBP1-205ENST00000594973 KRTAP11-1Q8IUC1 163 aa10.64□□□□□ -0.71
SHKBP1-205ENST00000594973 Q75L30 129 aa10.63□□□□□ -0.71
SHKBP1-205ENST00000594973 A0A087WTM6 91 aa10.62□□□□□ -0.71
SHKBP1-205ENST00000594973 PRR15LQ9BU68 103 aa10.62□□□□□ -0.71
SHKBP1-205ENST00000594973 LOC101927531A0A1B0GV80 90 aa10.61□□□□□ -0.71
SHKBP1-205ENST00000594973 Q6ZR54 194 aa10.59□□□□□ -0.71
SHKBP1-205ENST00000594973 LY6G6CO95867 125 aa10.58□□□□□ -0.72
SHKBP1-205ENST00000594973 A6NN06 94 aa10.58□□□□□ -0.72
SHKBP1-205ENST00000594973 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.58□□□□□ -0.72
SHKBP1-205ENST00000594973 LCA10Q71F78 164 aa10.57□□□□□ -0.72
SHKBP1-205ENST00000594973 SPTSSBQ8NFR3 76 aa10.57□□□□□ -0.72
SHKBP1-205ENST00000594973 KRTAP29-1A8MX34 341 aaPredicted RBP10.55□□□□□ -0.72
SHKBP1-205ENST00000594973 H0Y9P7 68 aa10.55□□□□□ -0.72
SHKBP1-205ENST00000594973 WFDC13Q8IUB5 93 aa10.55□□□□□ -0.72
SHKBP1-205ENST00000594973 RTL8CO15255 209 aa10.54□□□□□ -0.72
SHKBP1-205ENST00000594973 SPACA4Q8TDM5 124 aa10.53□□□□□ -0.72
SHKBP1-205ENST00000594973 CDC42SE1Q9NRR8 79 aa10.53□□□□□ -0.72
SHKBP1-205ENST00000594973 A6NED7 52 aa10.53□□□□□ -0.72
SHKBP1-205ENST00000594973 C1orf134Q5TEV5 83 aa10.53□□□□□ -0.72
SHKBP1-205ENST00000594973 LINC00476Q8WZB0 136 aa10.51□□□□□ -0.73
SHKBP1-205ENST00000594973 A0A0G2JQZ4 141 aa10.5□□□□□ -0.73
SHKBP1-205ENST00000594973 DNAH17Q9UFH2 4485 aa10.49□□□□□ -0.73
SHKBP1-205ENST00000594973 DEFB116Q30KQ4 102 aa10.48□□□□□ -0.73
SHKBP1-205ENST00000594973 C7orf65Q6ZTY9 151 aa10.48□□□□□ -0.73
SHKBP1-205ENST00000594973 COA5Q86WW8 74 aa10.47□□□□□ -0.73
SHKBP1-205ENST00000594973 IGLV5-52A0A0A0MRZ9 124 aa10.47□□□□□ -0.73
SHKBP1-205ENST00000594973 H0Y9J4 135 aa10.46□□□□□ -0.73
SHKBP1-205ENST00000594973 IGLV7-46A0A075B6I9 117 aa10.46□□□□□ -0.74
SHKBP1-205ENST00000594973 IGFL1Q6UW32 110 aa10.46□□□□□ -0.74
SHKBP1-205ENST00000594973 CASC2Q6XLA1 102 aa10.46□□□□□ -0.74
SHKBP1-205ENST00000594973 WWC2-AS2Q96NR7 200 aa10.46□□□□□ -0.74
SHKBP1-205ENST00000594973 IGLV8-61A0A075B6I0 122 aa10.44□□□□□ -0.74
SHKBP1-205ENST00000594973 DNAH6Q9C0G6 4158 aa10.44□□□□□ -0.74
SHKBP1-205ENST00000594973 FRAS1Q86XX4 4008 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms