RNA–Protein interactions for RNA: ENST00000594759.5

LIG1-207, Transcript of DNA ligase 1, humanhuman

TSL 1 (best)

Gene LIG1, Length 4,102 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-207ENST00000594759 LINC01554Q52M75 96 aa8.07□□□□□ -1.12
LIG1-207ENST00000594759 PRAC1Q96KF2 57 aa8.06□□□□□ -1.12
LIG1-207ENST00000594759 MXRA5Q9NR99 2828 aa8.06□□□□□ -1.12
LIG1-207ENST00000594759 HIVEP1P15822 2718 aa8.05□□□□□ -1.12
LIG1-207ENST00000594759 TP53AIP1Q9HCN2 124 aa8.05□□□□□ -1.12
LIG1-207ENST00000594759 IGHV6-1A0A0B4J1U7 121 aa8.05□□□□□ -1.12
LIG1-207ENST00000594759 A0A0G2JQZ4 141 aa8.04□□□□□ -1.12
LIG1-207ENST00000594759 A0A1W2PNN7 141 aa8.04□□□□□ -1.12
LIG1-207ENST00000594759 PRLHP81277 87 aa8.04□□□□□ -1.12
LIG1-207ENST00000594759 CELSR1Q9NYQ6 3014 aa8.04□□□□□ -1.12
LIG1-207ENST00000594759 MOBPQ13875 183 aa8.03□□□□□ -1.12
LIG1-207ENST00000594759 CSNK1G2-AS1Q8NCQ2 148 aa8.03□□□□□ -1.12
LIG1-207ENST00000594759 KRTAP1-1Q07627 177 aa8.02□□□□□ -1.13
LIG1-207ENST00000594759 LINC00313P59037 77 aa8.02□□□□□ -1.13
LIG1-207ENST00000594759 X6R8D5 127 aa8.01□□□□□ -1.13
LIG1-207ENST00000594759 KRTAP24-1Q3LI83 254 aa8.01□□□□□ -1.13
LIG1-207ENST00000594759 A8MWP4 228 aa8□□□□□ -1.13
LIG1-207ENST00000594759 KRTAP10-3P60369 221 aa8□□□□□ -1.13
LIG1-207ENST00000594759 ZCCHC13Q8WW36 166 aaKnown RBP8□□□□□ -1.13
LIG1-207ENST00000594759 SPINK6Q6UWN8 80 aa8□□□□□ -1.13
LIG1-207ENST00000594759 ACYP2P14621 99 aa8□□□□□ -1.13
LIG1-207ENST00000594759 IGFL1Q6UW32 110 aa7.99□□□□□ -1.13
LIG1-207ENST00000594759 SVEP1Q4LDE5 3571 aa7.99□□□□□ -1.13
LIG1-207ENST00000594759 IGLV9-49A0A0B4J1Y8 123 aa7.98□□□□□ -1.13
LIG1-207ENST00000594759 SPRR4Q96PI1 79 aa7.97□□□□□ -1.13
LIG1-207ENST00000594759 LINC01558Q9Y6Z2 57 aa7.97□□□□□ -1.13
LIG1-207ENST00000594759 PRR34Q9NV39 138 aa7.97□□□□□ -1.13
LIG1-207ENST00000594759 A6NN06 94 aa7.97□□□□□ -1.13
LIG1-207ENST00000594759 IGLV7-46A0A075B6I9 117 aa7.96□□□□□ -1.14
LIG1-207ENST00000594759 SPINK7P58062 85 aa7.96□□□□□ -1.14
LIG1-207ENST00000594759 ZNF706Q9Y5V0 76 aaPredicted RBP7.95□□□□□ -1.14
LIG1-207ENST00000594759 C19orf73Q9NVV2 129 aa7.94□□□□□ -1.14
LIG1-207ENST00000594759 IGLV1-50A0A075B6I6 118 aa7.93□□□□□ -1.14
LIG1-207ENST00000594759 FAM168BA1KXE4 195 aa7.93□□□□□ -1.14
LIG1-207ENST00000594759 UQCR11O14957 56 aa7.93□□□□□ -1.14
LIG1-207ENST00000594759 PRR26Q8N8Z3 221 aa7.93□□□□□ -1.14
LIG1-207ENST00000594759 CUBNO60494 3623 aa7.92□□□□□ -1.14
LIG1-207ENST00000594759 K7ERS5 55 aa7.92□□□□□ -1.14
LIG1-207ENST00000594759 MIR22HGQ0VDD5 57 aa7.91□□□□□ -1.14
LIG1-207ENST00000594759 LCE6AA0A183 80 aa7.9□□□□□ -1.14
LIG1-207ENST00000594759 IGLV8-61A0A075B6I0 122 aa7.89□□□□□ -1.15
LIG1-207ENST00000594759 Q8NAQ8 132 aa7.89□□□□□ -1.15
LIG1-207ENST00000594759 C15orf56Q8N910 161 aa7.88□□□□□ -1.15
LIG1-207ENST00000594759 KMT2BQ9UMN6 2715 aaPredicted RBP7.85□□□□□ -1.15
LIG1-207ENST00000594759 SPENQ96T58 3664 aaKnown RBP7.85□□□□□ -1.15
LIG1-207ENST00000594759 SPINK1P00995 79 aa7.85□□□□□ -1.15
LIG1-207ENST00000594759 LINC01556Q5JQF7 62 aa7.83□□□□□ -1.16
LIG1-207ENST00000594759 KRTAP10-11P60412 298 aa7.83□□□□□ -1.16
LIG1-207ENST00000594759 CNBPP62633 177 aaKnown RBP7.82□□□□□ -1.16
LIG1-207ENST00000594759 MRPL34Q9BQ48 92 aaKnown RBP7.82□□□□□ -1.16
LIG1-207ENST00000594759 C8orf17Q9NRJ1 99 aa7.82□□□□□ -1.16
LIG1-207ENST00000594759 HRES1P13985 223 aa7.8□□□□□ -1.16
LIG1-207ENST00000594759 CSAG1Q6PB30 78 aa7.8□□□□□ -1.16
LIG1-207ENST00000594759 C14orf177Q52M58 125 aa7.8□□□□□ -1.16
LIG1-207ENST00000594759 TENM4Q6N022 2769 aa7.8□□□□□ -1.16
LIG1-207ENST00000594759 C9orf163Q8N9P6 203 aa7.8□□□□□ -1.16
LIG1-207ENST00000594759 PLA2G2DQ9UNK4 145 aa7.77□□□□□ -1.17
LIG1-207ENST00000594759 C1orf134Q5TEV5 83 aa7.77□□□□□ -1.17
LIG1-207ENST00000594759 LY6G6CO95867 125 aa7.76□□□□□ -1.17
LIG1-207ENST00000594759 TNP2Q05952 138 aa7.76□□□□□ -1.17
LIG1-207ENST00000594759 ADM2Q7Z4H4 148 aa7.76□□□□□ -1.17
LIG1-207ENST00000594759 STAB2Q8WWQ8 2551 aa7.75□□□□□ -1.17
LIG1-207ENST00000594759 TLX1NBP0CAT3 122 aa7.74□□□□□ -1.17
LIG1-207ENST00000594759 KRTAP29-1A8MX34 341 aaPredicted RBP7.73□□□□□ -1.17
LIG1-207ENST00000594759 H3BNG1 76 aa7.73□□□□□ -1.17
LIG1-207ENST00000594759 IGKV2D-30A0A075B6S6 120 aa7.72□□□□□ -1.17
LIG1-207ENST00000594759 MMP24-AS1A0A0U1RRL7 71 aa7.72□□□□□ -1.17
LIG1-207ENST00000594759 A0A1B0GVX0 72 aa7.72□□□□□ -1.17
LIG1-207ENST00000594759 IGKV2-30P06310 120 aa7.72□□□□□ -1.17
LIG1-207ENST00000594759 CSMD2Q7Z408 3487 aa7.72□□□□□ -1.17
LIG1-207ENST00000594759 PLA2G1BP04054 148 aaKnown RBP7.72□□□□□ -1.17
LIG1-207ENST00000594759 K7EIL1 84 aa7.71□□□□□ -1.18
LIG1-207ENST00000594759 CIRBP-AS1Q8TBR5 109 aa7.7□□□□□ -1.18
LIG1-207ENST00000594759 SPRR1AP35321 89 aa7.7□□□□□ -1.18
LIG1-207ENST00000594759 TENM1Q9UKZ4 2725 aa7.69□□□□□ -1.18
LIG1-207ENST00000594759 IGLV5-37A0A075B6J1 123 aa7.68□□□□□ -1.18
LIG1-207ENST00000594759 SPINT4Q6UDR6 99 aa7.68□□□□□ -1.18
LIG1-207ENST00000594759 OTOGQ6ZRI0 2925 aa7.68□□□□□ -1.18
LIG1-207ENST00000594759 SSBP3-AS1Q7Z2R9 100 aa7.67□□□□□ -1.18
LIG1-207ENST00000594759 ASB16-AS1Q495Z4 193 aa7.67□□□□□ -1.18
LIG1-207ENST00000594759 LINC00472Q9H8W2 130 aa7.67□□□□□ -1.18
LIG1-207ENST00000594759 FBN1P35555 2871 aaKnown RBP7.67□□□□□ -1.18
LIG1-207ENST00000594759 NUPR2A6NF83 97 aa7.66□□□□□ -1.18
LIG1-207ENST00000594759 CASC10Q5T4H9 136 aa7.66□□□□□ -1.18
LIG1-207ENST00000594759 CHTF8P0CG12 524 aa7.65□□□□□ -1.18
LIG1-207ENST00000594759 VWFP04275 2813 aa7.65□□□□□ -1.18
LIG1-207ENST00000594759 DNAH10OSP0CZ25 163 aa7.63□□□□□ -1.19
LIG1-207ENST00000594759 BSNQ9UPA5 3926 aa7.63□□□□□ -1.19
LIG1-207ENST00000594759 NBPF19A0A087WUL8 3843 aa7.63□□□□□ -1.19
LIG1-207ENST00000594759 FAM229AH3BQW9 127 aa7.63□□□□□ -1.19
LIG1-207ENST00000594759 ZFHX3Q15911 3703 aa7.63□□□□□ -1.19
LIG1-207ENST00000594759 KRTAP4-16G5E9R7 235 aaPredicted RBP7.6□□□□□ -1.19
LIG1-207ENST00000594759 KRTAP26-1Q6PEX3 210 aa7.57□□□□□ -1.2
LIG1-207ENST00000594759 SPATA8Q6RVD6 105 aa7.56□□□□□ -1.2
LIG1-207ENST00000594759 RTL8CO15255 209 aa7.56□□□□□ -1.2
LIG1-207ENST00000594759 Q6ZR54 194 aa7.55□□□□□ -1.2
LIG1-207ENST00000594759 PDZD2O15018 2839 aa7.55□□□□□ -1.2
LIG1-207ENST00000594759 IGLV5-52A0A0A0MRZ9 124 aa7.54□□□□□ -1.2
LIG1-207ENST00000594759 TENM3Q9P273 2699 aa7.53□□□□□ -1.2
LIG1-207ENST00000594759 NBDYA0A0U1RRE5 68 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms