RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 APOBP04114 4563 aaKnown RBP9.29□□□□□ -0.92
VRK3-207ENST00000594092 PDE6GP18545 87 aa9.28□□□□□ -0.92
VRK3-207ENST00000594092 SRRM2Q9UQ35 2752 aaKnown RBP9.27□□□□□ -0.93
VRK3-207ENST00000594092 IGLV7-43P04211 117 aa9.26□□□□□ -0.93
VRK3-207ENST00000594092 Q6ZQT0 140 aa9.26□□□□□ -0.93
VRK3-207ENST00000594092 ZNF861PO60384 105 aa9.26□□□□□ -0.93
VRK3-207ENST00000594092 TRBV7-4A0A0J9YYF1 115 aa9.25□□□□□ -0.93
VRK3-207ENST00000594092 C3orf22Q8N5N4 141 aa9.25□□□□□ -0.93
VRK3-207ENST00000594092 VPS13BQ7Z7G8 4022 aa9.24□□□□□ -0.93
VRK3-207ENST00000594092 F8WEM9 126 aa9.21□□□□□ -0.93
VRK3-207ENST00000594092 SMIM29Q86T20 159 aa9.21□□□□□ -0.93
VRK3-207ENST00000594092 SPRR1BP22528 89 aa9.2□□□□□ -0.94
VRK3-207ENST00000594092 SMR3BP02814 79 aaPredicted RBP9.19□□□□□ -0.94
VRK3-207ENST00000594092 LINC00846Q9NV44 126 aa9.19□□□□□ -0.94
VRK3-207ENST00000594092 SPRR4Q96PI1 79 aa9.19□□□□□ -0.94
VRK3-207ENST00000594092 ZNF706Q9Y5V0 76 aaPredicted RBP9.18□□□□□ -0.94
VRK3-207ENST00000594092 MT-ATP8P03928 68 aa9.17□□□□□ -0.94
VRK3-207ENST00000594092 RPL37AP61513 92 aaKnown RBP9.17□□□□□ -0.94
VRK3-207ENST00000594092 LINC00643Q86TS7 51 aa9.16□□□□□ -0.94
VRK3-207ENST00000594092 LINC00483Q53H64 154 aa9.15□□□□□ -0.95
VRK3-207ENST00000594092 FAT1Q14517 4588 aa9.14□□□□□ -0.95
VRK3-207ENST00000594092 IGLV8-61A0A075B6I0 122 aa9.14□□□□□ -0.95
VRK3-207ENST00000594092 UBL5Q9BZL1 73 aa9.14□□□□□ -0.95
VRK3-207ENST00000594092 EPPK1P58107 5090 aaKnown RBP9.13□□□□□ -0.95
VRK3-207ENST00000594092 CDK2AP2O75956 126 aa9.12□□□□□ -0.95
VRK3-207ENST00000594092 Q6Q795 121 aa9.12□□□□□ -0.95
VRK3-207ENST00000594092 Q8NBF4 154 aa9.1□□□□□ -0.95
VRK3-207ENST00000594092 ANAPC11Q9NYG5 84 aa9.1□□□□□ -0.95
VRK3-207ENST00000594092 HSPG2P98160 4391 aa9.1□□□□□ -0.95
VRK3-207ENST00000594092 A0A1B0GW54 56 aa9.1□□□□□ -0.95
VRK3-207ENST00000594092 A0A1W2PNM2 257 aa9.1□□□□□ -0.95
VRK3-207ENST00000594092 KRTAP10-4P60372 401 aaPredicted RBP9.1□□□□□ -0.95
VRK3-207ENST00000594092 Q6JHZ5 121 aa9.1□□□□□ -0.95
VRK3-207ENST00000594092 IGFL1Q6UW32 110 aa9.1□□□□□ -0.95
VRK3-207ENST00000594092 RYR1P21817 5038 aa9.09□□□□□ -0.95
VRK3-207ENST00000594092 ANAPC13Q9BS18 74 aa9.08□□□□□ -0.96
VRK3-207ENST00000594092 Q6ZVQ6 151 aa9.07□□□□□ -0.96
VRK3-207ENST00000594092 TRBV7-7A0A0K0K1E9 115 aa9.06□□□□□ -0.96
VRK3-207ENST00000594092 ATP5EP2Q5VTU8 51 aa9.06□□□□□ -0.96
VRK3-207ENST00000594092 IGLV9-49A0A0B4J1Y8 123 aa9.05□□□□□ -0.96
VRK3-207ENST00000594092 C9orf153Q5TBE3 101 aa9.05□□□□□ -0.96
VRK3-207ENST00000594092 SPINK6Q6UWN8 80 aa9.05□□□□□ -0.96
VRK3-207ENST00000594092 A0A0G2JQZ4 141 aa9.05□□□□□ -0.96
VRK3-207ENST00000594092 CRYGAP11844 174 aa9.04□□□□□ -0.96
VRK3-207ENST00000594092 IGKV3D-7A0A0C4DH55 119 aa9.03□□□□□ -0.96
VRK3-207ENST00000594092 IMUPQ9GZP8 106 aa9.03□□□□□ -0.96
VRK3-207ENST00000594092 FAM229AH3BQW9 127 aa9.03□□□□□ -0.96
VRK3-207ENST00000594092 KRTAP1-4P0C5Y4 121 aa9.03□□□□□ -0.96
VRK3-207ENST00000594092 NREPQ16612 68 aa9.03□□□□□ -0.96
VRK3-207ENST00000594092 KIAA1109Q2LD37 5005 aa9.02□□□□□ -0.97
VRK3-207ENST00000594092 PLA2G1BP04054 148 aaKnown RBP9.01□□□□□ -0.97
VRK3-207ENST00000594092 MOBPQ13875 183 aa9.01□□□□□ -0.97
VRK3-207ENST00000594092 FAM229BQ4G0N7 80 aa9□□□□□ -0.97
VRK3-207ENST00000594092 Q5VSD8 79 aa8.99□□□□□ -0.97
VRK3-207ENST00000594092 A0A087X002 238 aa8.98□□□□□ -0.97
VRK3-207ENST00000594092 CXCL6P80162 114 aa8.98□□□□□ -0.97
VRK3-207ENST00000594092 PKHD1L1Q86WI1 4243 aa8.97□□□□□ -0.97
VRK3-207ENST00000594092 A0A087WSZ3 146 aa8.97□□□□□ -0.97
VRK3-207ENST00000594092 KRTAP17-1Q9BYP8 105 aa8.97□□□□□ -0.97
VRK3-207ENST00000594092 KRTAP13-2Q52LG2 175 aa8.96□□□□□ -0.97
VRK3-207ENST00000594092 HIST1H4AP62805 103 aaKnown RBP8.95□□□□□ -0.98
VRK3-207ENST00000594092 BPY2O14599 106 aa8.94□□□□□ -0.98
VRK3-207ENST00000594092 SSBP3-AS1Q7Z2R9 100 aa8.94□□□□□ -0.98
VRK3-207ENST00000594092 Q8N1X5 172 aa8.91□□□□□ -0.98
VRK3-207ENST00000594092 HRCT1Q6UXD1 115 aa8.9□□□□□ -0.98
VRK3-207ENST00000594092 A0A087WVE0 104 aa8.89□□□□□ -0.99
VRK3-207ENST00000594092 FAM236AA0A1B0GUQ0 79 aa8.89□□□□□ -0.99
VRK3-207ENST00000594092 FAM236BA0A1B0GV22 79 aa8.89□□□□□ -0.99
VRK3-207ENST00000594092 PRR26Q8N8Z3 221 aa8.88□□□□□ -0.99
VRK3-207ENST00000594092 TYMSOSQ8TAI1 123 aa8.87□□□□□ -0.99
VRK3-207ENST00000594092 SS18L2Q9UHA2 77 aa8.87□□□□□ -0.99
VRK3-207ENST00000594092 CD164Q04900 197 aa8.85□□□□□ -0.99
VRK3-207ENST00000594092 BIRC6Q9NR09 4857 aa8.84□□□□□ -0.99
VRK3-207ENST00000594092 Q8N9L7 120 aa8.84□□□□□ -0.99
VRK3-207ENST00000594092 SVIPQ8NHG7 77 aa8.84□□□□□ -0.99
VRK3-207ENST00000594092 CCDC179H3BU77 68 aa8.83□□□□□ -1
VRK3-207ENST00000594092 IGKV4-1P06312 121 aa8.82□□□□□ -1
VRK3-207ENST00000594092 DEFB116Q30KQ4 102 aa8.82□□□□□ -1
VRK3-207ENST00000594092 LINC00472Q9H8W2 130 aa8.82□□□□□ -1
VRK3-207ENST00000594092 DSCR10P59022 87 aa8.82□□□□□ -1
VRK3-207ENST00000594092 J3KT08 172 aa8.8□□□□□ -1
VRK3-207ENST00000594092 ATOX1O00244 68 aa8.8□□□□□ -1
VRK3-207ENST00000594092 K7EQZ3 153 aa8.78□□□□□ -1
VRK3-207ENST00000594092 LRP1Q07954 4544 aaKnown RBP8.78□□□□□ -1
VRK3-207ENST00000594092 Q96NJ1 140 aa8.77□□□□□ -1.01
VRK3-207ENST00000594092 UQCRQO14949 82 aa8.76□□□□□ -1.01
VRK3-207ENST00000594092 C4orf48Q5BLP8 95 aa8.76□□□□□ -1.01
VRK3-207ENST00000594092 LINC00304Q8N9R0 145 aa8.76□□□□□ -1.01
VRK3-207ENST00000594092 KRTAP4-5Q9BYR2 181 aa8.75□□□□□ -1.01
VRK3-207ENST00000594092 FAT3Q8TDW7 4589 aa8.75□□□□□ -1.01
VRK3-207ENST00000594092 FLG2Q5D862 2391 aaPredicted RBP8.75□□□□□ -1.01
VRK3-207ENST00000594092 A8MWP4 228 aa8.75□□□□□ -1.01
VRK3-207ENST00000594092 SPINK1P00995 79 aa8.73□□□□□ -1.01
VRK3-207ENST00000594092 TNXBP22105 4242 aa8.73□□□□□ -1.01
VRK3-207ENST00000594092 KRTAP10-8P60410 259 aa8.73□□□□□ -1.01
VRK3-207ENST00000594092 Q5XG85 94 aa8.73□□□□□ -1.01
VRK3-207ENST00000594092 SPAG11AQ6PDA7 123 aa8.73□□□□□ -1.01
VRK3-207ENST00000594092 NDUFB1O75438 58 aa8.72□□□□□ -1.01
VRK3-207ENST00000594092 ASB16-AS1Q495Z4 193 aa8.72□□□□□ -1.01
VRK3-207ENST00000594092 PRR15Q8IV56 129 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms