RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 NPC2P61916 151 aa1.02□□□□□ -2.25
VRK3-204ENST00000593912 ORMDL2Q53FV1 153 aa1.02□□□□□ -2.25
VRK3-204ENST00000593912 CSAG1Q6PB30 78 aa1.02□□□□□ -2.25
VRK3-204ENST00000593912 ORMDL3Q8N138 153 aa1.02□□□□□ -2.25
VRK3-204ENST00000593912 Q8N8P6 123 aa1.02□□□□□ -2.25
VRK3-204ENST00000593912 TOMM6Q96B49 74 aa1.02□□□□□ -2.25
VRK3-204ENST00000593912 SCGB3A1Q96QR1 104 aa1.02□□□□□ -2.25
VRK3-204ENST00000593912 LITAFQ99732 161 aa1.02□□□□□ -2.25
VRK3-204ENST00000593912 MAP1LC3CQ9BXW4 147 aa1.02□□□□□ -2.25
VRK3-204ENST00000593912 MAP1LC3AQ9H492 121 aa1.02□□□□□ -2.25
VRK3-204ENST00000593912 MANBALQ9NQG1 85 aa1.02□□□□□ -2.25
VRK3-204ENST00000593912 PDE6DO43924 150 aa1.01□□□□□ -2.25
VRK3-204ENST00000593912 IGLC3P0DOY3 106 aa1.01□□□□□ -2.25
VRK3-204ENST00000593912 S100A5P33763 92 aa1.01□□□□□ -2.25
VRK3-204ENST00000593912 Q5BKY6 102 aa1.01□□□□□ -2.25
VRK3-204ENST00000593912 Q5W150 140 aa1.01□□□□□ -2.25
VRK3-204ENST00000593912 Q6JHZ5 121 aa1.01□□□□□ -2.25
VRK3-204ENST00000593912 MRPL54Q6P161 138 aaKnown RBP1.01□□□□□ -2.25
VRK3-204ENST00000593912 SFTA2Q6UW10 78 aa1.01□□□□□ -2.25
VRK3-204ENST00000593912 ERASQ7Z444 233 aa1.01□□□□□ -2.25
VRK3-204ENST00000593912 MT1LQ93083 61 aa1.01□□□□□ -2.25
VRK3-204ENST00000593912 KRTAP3-1Q9BYR8 98 aa1.01□□□□□ -2.25
VRK3-204ENST00000593912 S4R3F8 94 aa1.01□□□□□ -2.25
VRK3-204ENST00000593912 FAM240BA0A1B0GVZ2 78 aa1□□□□□ -2.25
VRK3-204ENST00000593912 C11orf86A6NJI1 115 aa1□□□□□ -2.25
VRK3-204ENST00000593912 H3BUT2 72 aa1□□□□□ -2.25
VRK3-204ENST00000593912 SSNA1O43805 119 aa1□□□□□ -2.25
VRK3-204ENST00000593912 PPBPP02775 128 aa1□□□□□ -2.25
VRK3-204ENST00000593912 IGKV4-1P06312 121 aa1□□□□□ -2.25
VRK3-204ENST00000593912 DEFB116Q30KQ4 102 aa1□□□□□ -2.25
VRK3-204ENST00000593912 TMEM170BQ5T4T1 132 aa1□□□□□ -2.25
VRK3-204ENST00000593912 LINC00518Q8N0U6 118 aa1□□□□□ -2.25
VRK3-204ENST00000593912 OR13C6PQ8NH95 151 aa1□□□□□ -2.25
VRK3-204ENST00000593912 SS18L2Q9UHA2 77 aa1□□□□□ -2.25
VRK3-204ENST00000593912 V9GYV3 84 aa1□□□□□ -2.25
VRK3-204ENST00000593912 NDUFC2O95298 119 aa0.99□□□□□ -2.25
VRK3-204ENST00000593912 C4orf26Q17RF5 130 aa0.99□□□□□ -2.25
VRK3-204ENST00000593912 KRTAP19-5Q3LI72 72 aa0.99□□□□□ -2.25
VRK3-204ENST00000593912 FAM74A3Q4VXF1 159 aa0.99□□□□□ -2.25
VRK3-204ENST00000593912 MIEN1Q9BRT3 115 aa0.99□□□□□ -2.25
VRK3-204ENST00000593912 NAT8BQ9UHF3 227 aa0.99□□□□□ -2.25
VRK3-204ENST00000593912 IGKV3D-7A0A0C4DH55 119 aa0.98□□□□□ -2.25
VRK3-204ENST00000593912 A0A1B0GXF2 115 aa0.98□□□□□ -2.25
VRK3-204ENST00000593912 F8W036 122 aa0.98□□□□□ -2.25
VRK3-204ENST00000593912 CEBPGP53567 150 aa0.98□□□□□ -2.25
VRK3-204ENST00000593912 OCIAD2Q56VL3 154 aa0.98□□□□□ -2.25
VRK3-204ENST00000593912 LYRM7Q5U5X0 104 aa0.98□□□□□ -2.25
VRK3-204ENST00000593912 COMMD7Q86VX2 200 aa0.98□□□□□ -2.25
VRK3-204ENST00000593912 SLC7A5P1Q8MH63 180 aa0.98□□□□□ -2.25
VRK3-204ENST00000593912 RPS10P5Q9NQ39 176 aa0.98□□□□□ -2.25
VRK3-204ENST00000593912 TRAV13-2A0A0B4J235 113 aa0.97□□□□□ -2.25
VRK3-204ENST00000593912 TMEM223A0PJW6 202 aa0.97□□□□□ -2.25
VRK3-204ENST00000593912 PHGR1C9JFL3 82 aa0.97□□□□□ -2.25
VRK3-204ENST00000593912 HERV-K104P63124 156 aa0.97□□□□□ -2.25
VRK3-204ENST00000593912 RHEBQ15382 184 aa0.97□□□□□ -2.25
VRK3-204ENST00000593912 OSTCQ9NRP0 149 aa0.97□□□□□ -2.25
VRK3-204ENST00000593912 IGKV2D-30A0A075B6S6 120 aa0.96□□□□□ -2.26
VRK3-204ENST00000593912 A0A1B0GW15 77 aa0.96□□□□□ -2.26
VRK3-204ENST00000593912 SMIM27A0A1W2PRY6 76 aa0.96□□□□□ -2.26
VRK3-204ENST00000593912 ZNF815PA8K554 130 aa0.96□□□□□ -2.26
VRK3-204ENST00000593912 UMAD1C9J7I0 102 aa0.96□□□□□ -2.26
VRK3-204ENST00000593912 IGKV2-30P06310 120 aa0.96□□□□□ -2.26
VRK3-204ENST00000593912 C3orf79P0CE67 100 aa0.96□□□□□ -2.26
VRK3-204ENST00000593912 TSPEAR-AS2P59090 65 aa0.96□□□□□ -2.26
VRK3-204ENST00000593912 LAMTOR2Q9Y2Q5 125 aa0.96□□□□□ -2.26
VRK3-204ENST00000593912 CBY1Q9Y3M2 126 aa0.96□□□□□ -2.26
VRK3-204ENST00000593912 MYMXA0A1B0GTQ4 84 aa0.95□□□□□ -2.26
VRK3-204ENST00000593912 LINC00587B1AMM8 73 aa0.95□□□□□ -2.26
VRK3-204ENST00000593912 K7EMI3 77 aa0.95□□□□□ -2.26
VRK3-204ENST00000593912 HBDP02042 147 aa0.95□□□□□ -2.26
VRK3-204ENST00000593912 ANAPC16Q96DE5 110 aa0.95□□□□□ -2.26
VRK3-204ENST00000593912 DSCR8Q96T75 97 aa0.95□□□□□ -2.26
VRK3-204ENST00000593912 LINC00472Q9H8W2 130 aa0.95□□□□□ -2.26
VRK3-204ENST00000593912 C8orf87E5RJ46 101 aa0.94□□□□□ -2.26
VRK3-204ENST00000593912 TMEM250H0YL14 139 aa0.94□□□□□ -2.26
VRK3-204ENST00000593912 S100A8P05109 93 aa0.94□□□□□ -2.26
VRK3-204ENST00000593912 G0S2P27469 103 aa0.94□□□□□ -2.26
VRK3-204ENST00000593912 Q6ZQY7 126 aa0.94□□□□□ -2.26
VRK3-204ENST00000593912 TEN1Q86WV5 123 aa0.94□□□□□ -2.26
VRK3-204ENST00000593912 SMIM7Q9BQ49 75 aa0.94□□□□□ -2.26
VRK3-204ENST00000593912 TRBV7-6A0A0J9YX20 115 aa0.93□□□□□ -2.26
VRK3-204ENST00000593912 A0A1B0GVX0 72 aa0.93□□□□□ -2.26
VRK3-204ENST00000593912 ARPC5O15511 151 aa0.93□□□□□ -2.26
VRK3-204ENST00000593912 KRTAP6-2Q3LI66 62 aa0.93□□□□□ -2.26
VRK3-204ENST00000593912 LINC01554Q52M75 96 aa0.93□□□□□ -2.26
VRK3-204ENST00000593912 BAGE3Q86Y29 109 aa0.93□□□□□ -2.26
VRK3-204ENST00000593912 SPANXDQ9BXN6 97 aa0.93□□□□□ -2.26
VRK3-204ENST00000593912 NMUP48645 174 aa0.92□□□□□ -2.26
VRK3-204ENST00000593912 SPANXCQ9NY87 97 aa0.92□□□□□ -2.26
VRK3-204ENST00000593912 A0A087WVE0 104 aa0.91□□□□□ -2.26
VRK3-204ENST00000593912 A0A096LNJ9 63 aa0.91□□□□□ -2.26
VRK3-204ENST00000593912 TEX46H3BTG2 121 aa0.91□□□□□ -2.26
VRK3-204ENST00000593912 ADIRFQ15847 76 aa0.91□□□□□ -2.26
VRK3-204ENST00000593912 C7orf65Q6ZTY9 151 aa0.91□□□□□ -2.26
VRK3-204ENST00000593912 ADM2Q7Z4H4 148 aa0.91□□□□□ -2.26
VRK3-204ENST00000593912 C10orf95Q9H7T3 257 aa0.91□□□□□ -2.26
VRK3-204ENST00000593912 SMLR1H3BR10 107 aa0.9□□□□□ -2.27
VRK3-204ENST00000593912 K7EQZ3 153 aa0.9□□□□□ -2.27
VRK3-204ENST00000593912 PMCHL1Q16048 86 aa0.9□□□□□ -2.27
VRK3-204ENST00000593912 KRTAP6-1Q3LI64 71 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms