RNA–Protein interactions for RNA: ENST00000593678.5

GTF2F1-202, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 2

Gene GTF2F1, Length 1,705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-202ENST00000593678 PKHD1P08F94 4074 aa9.1□□□□□ -0.95
GTF2F1-202ENST00000593678 SPRR1BP22528 89 aa9.1□□□□□ -0.95
GTF2F1-202ENST00000593678 SMIM29Q86T20 159 aa9.08□□□□□ -0.96
GTF2F1-202ENST00000593678 SPRR4Q96PI1 79 aa9.08□□□□□ -0.96
GTF2F1-202ENST00000593678 SRRM2Q9UQ35 2752 aaKnown RBP9.08□□□□□ -0.96
GTF2F1-202ENST00000593678 CDIP1Q9H305 208 aa9.05□□□□□ -0.96
GTF2F1-202ENST00000593678 LINC00483Q53H64 154 aa9.04□□□□□ -0.96
GTF2F1-202ENST00000593678 XGP55808 180 aa9.03□□□□□ -0.96
GTF2F1-202ENST00000593678 RPL37AP61513 92 aaKnown RBP9.03□□□□□ -0.96
GTF2F1-202ENST00000593678 Q6JHZ5 121 aa9.03□□□□□ -0.96
GTF2F1-202ENST00000593678 UBL5Q9BZL1 73 aa9.02□□□□□ -0.96
GTF2F1-202ENST00000593678 IGLV8-61A0A075B6I0 122 aa9.02□□□□□ -0.97
GTF2F1-202ENST00000593678 C9orf153Q5TBE3 101 aa9.02□□□□□ -0.97
GTF2F1-202ENST00000593678 LINC00846Q9NV44 126 aa9.02□□□□□ -0.97
GTF2F1-202ENST00000593678 LRP1BQ9NZR2 4599 aa9.01□□□□□ -0.97
GTF2F1-202ENST00000593678 IGLV9-49A0A0B4J1Y8 123 aa9.01□□□□□ -0.97
GTF2F1-202ENST00000593678 RYR3Q15413 4870 aa9□□□□□ -0.97
GTF2F1-202ENST00000593678 SIGMAR1Q99720 223 aa9□□□□□ -0.97
GTF2F1-202ENST00000593678 A0A1B0GW54 56 aa9□□□□□ -0.97
GTF2F1-202ENST00000593678 SMR3BP02814 79 aaPredicted RBP9□□□□□ -0.97
GTF2F1-202ENST00000593678 IGFL1Q6UW32 110 aa9□□□□□ -0.97
GTF2F1-202ENST00000593678 LINC00643Q86TS7 51 aa8.99□□□□□ -0.97
GTF2F1-202ENST00000593678 Q8NBF4 154 aa8.99□□□□□ -0.97
GTF2F1-202ENST00000593678 DYNC1H1Q14204 4646 aaKnown RBP8.98□□□□□ -0.97
GTF2F1-202ENST00000593678 A0A1W2PNM2 257 aa8.96□□□□□ -0.98
GTF2F1-202ENST00000593678 ANAPC11Q9NYG5 84 aa8.96□□□□□ -0.98
GTF2F1-202ENST00000593678 MOBPQ13875 183 aa8.94□□□□□ -0.98
GTF2F1-202ENST00000593678 SPINK6Q6UWN8 80 aa8.94□□□□□ -0.98
GTF2F1-202ENST00000593678 MT-ATP8P03928 68 aa8.94□□□□□ -0.98
GTF2F1-202ENST00000593678 CRYGAP11844 174 aa8.93□□□□□ -0.98
GTF2F1-202ENST00000593678 NREPQ16612 68 aa8.93□□□□□ -0.98
GTF2F1-202ENST00000593678 A0A0G2JQZ4 141 aa8.92□□□□□ -0.98
GTF2F1-202ENST00000593678 Q6ZVQ6 151 aa8.92□□□□□ -0.98
GTF2F1-202ENST00000593678 CDK2AP2O75956 126 aa8.91□□□□□ -0.98
GTF2F1-202ENST00000593678 ATP5EP2Q5VTU8 51 aa8.91□□□□□ -0.98
GTF2F1-202ENST00000593678 VPS13BQ7Z7G8 4022 aa8.91□□□□□ -0.98
GTF2F1-202ENST00000593678 FAM229AH3BQW9 127 aa8.91□□□□□ -0.98
GTF2F1-202ENST00000593678 FAM229BQ4G0N7 80 aa8.91□□□□□ -0.98
GTF2F1-202ENST00000593678 PLA2G1BP04054 148 aaKnown RBP8.9□□□□□ -0.98
GTF2F1-202ENST00000593678 Q6Q795 121 aa8.89□□□□□ -0.99
GTF2F1-202ENST00000593678 A0A087WSZ3 146 aa8.88□□□□□ -0.99
GTF2F1-202ENST00000593678 APOBP04114 4563 aaKnown RBP8.87□□□□□ -0.99
GTF2F1-202ENST00000593678 SSBP3-AS1Q7Z2R9 100 aa8.87□□□□□ -0.99
GTF2F1-202ENST00000593678 IGKV3D-7A0A0C4DH55 119 aa8.86□□□□□ -0.99
GTF2F1-202ENST00000593678 TRBV7-7A0A0K0K1E9 115 aa8.85□□□□□ -0.99
GTF2F1-202ENST00000593678 IMUPQ9GZP8 106 aa8.85□□□□□ -0.99
GTF2F1-202ENST00000593678 HRCT1Q6UXD1 115 aa8.84□□□□□ -0.99
GTF2F1-202ENST00000593678 A0A087X002 238 aa8.83□□□□□ -1
GTF2F1-202ENST00000593678 BPY2O14599 106 aa8.83□□□□□ -1
GTF2F1-202ENST00000593678 KRTAP1-4P0C5Y4 121 aa8.83□□□□□ -1
GTF2F1-202ENST00000593678 CXCL6P80162 114 aa8.83□□□□□ -1
GTF2F1-202ENST00000593678 SS18L2Q9UHA2 77 aa8.83□□□□□ -1
GTF2F1-202ENST00000593678 HIST1H4AP62805 103 aaKnown RBP8.82□□□□□ -1
GTF2F1-202ENST00000593678 KRTAP10-4P60372 401 aaPredicted RBP8.8□□□□□ -1
GTF2F1-202ENST00000593678 CD164Q04900 197 aa8.8□□□□□ -1
GTF2F1-202ENST00000593678 Q5VSD8 79 aa8.8□□□□□ -1
GTF2F1-202ENST00000593678 SCGB1A1P11684 91 aa8.79□□□□□ -1
GTF2F1-202ENST00000593678 KRTAP13-2Q52LG2 175 aa8.79□□□□□ -1
GTF2F1-202ENST00000593678 TYMSOSQ8TAI1 123 aa8.79□□□□□ -1
GTF2F1-202ENST00000593678 C4orf48Q5BLP8 95 aa8.77□□□□□ -1.01
GTF2F1-202ENST00000593678 FAT1Q14517 4588 aa8.73□□□□□ -1.01
GTF2F1-202ENST00000593678 PRR26Q8N8Z3 221 aa8.73□□□□□ -1.01
GTF2F1-202ENST00000593678 J3KT08 172 aa8.72□□□□□ -1.01
GTF2F1-202ENST00000593678 DEFB116Q30KQ4 102 aa8.72□□□□□ -1.01
GTF2F1-202ENST00000593678 A0A087WVE0 104 aa8.71□□□□□ -1.01
GTF2F1-202ENST00000593678 RYR1P21817 5038 aa8.71□□□□□ -1.02
GTF2F1-202ENST00000593678 FAM236AA0A1B0GUQ0 79 aa8.71□□□□□ -1.02
GTF2F1-202ENST00000593678 FAM236BA0A1B0GV22 79 aa8.71□□□□□ -1.02
GTF2F1-202ENST00000593678 LIMD2Q9BT23 127 aa8.7□□□□□ -1.02
GTF2F1-202ENST00000593678 LINC00472Q9H8W2 130 aa8.7□□□□□ -1.02
GTF2F1-202ENST00000593678 EPPK1P58107 5090 aaKnown RBP8.7□□□□□ -1.02
GTF2F1-202ENST00000593678 Q8N1X5 172 aa8.69□□□□□ -1.02
GTF2F1-202ENST00000593678 Q8N9L7 120 aa8.69□□□□□ -1.02
GTF2F1-202ENST00000593678 HSPG2P98160 4391 aa8.68□□□□□ -1.02
GTF2F1-202ENST00000593678 SPINK1P00995 79 aa8.68□□□□□ -1.02
GTF2F1-202ENST00000593678 IGKV4-1P06312 121 aa8.68□□□□□ -1.02
GTF2F1-202ENST00000593678 LINC00304Q8N9R0 145 aa8.68□□□□□ -1.02
GTF2F1-202ENST00000593678 NDUFB1O75438 58 aa8.67□□□□□ -1.02
GTF2F1-202ENST00000593678 DSCR10P59022 87 aa8.67□□□□□ -1.02
GTF2F1-202ENST00000593678 SPAG11AQ6PDA7 123 aa8.67□□□□□ -1.02
GTF2F1-202ENST00000593678 K7EQZ3 153 aa8.66□□□□□ -1.02
GTF2F1-202ENST00000593678 A8MWP4 228 aa8.65□□□□□ -1.03
GTF2F1-202ENST00000593678 KIAA1109Q2LD37 5005 aa8.65□□□□□ -1.03
GTF2F1-202ENST00000593678 Q5XG85 94 aa8.64□□□□□ -1.03
GTF2F1-202ENST00000593678 ASB16-AS1Q495Z4 193 aa8.63□□□□□ -1.03
GTF2F1-202ENST00000593678 Q96NJ1 140 aa8.63□□□□□ -1.03
GTF2F1-202ENST00000593678 ATOX1O00244 68 aa8.62□□□□□ -1.03
GTF2F1-202ENST00000593678 PCP4P48539 62 aa8.61□□□□□ -1.03
GTF2F1-202ENST00000593678 ANAPC13Q9BS18 74 aa8.61□□□□□ -1.03
GTF2F1-202ENST00000593678 RPS29P62273 56 aaKnown RBP8.6□□□□□ -1.03
GTF2F1-202ENST00000593678 PRR15Q8IV56 129 aa8.6□□□□□ -1.03
GTF2F1-202ENST00000593678 PKHD1L1Q86WI1 4243 aa8.59□□□□□ -1.03
GTF2F1-202ENST00000593678 HCG22E2RYF7 251 aa8.58□□□□□ -1.04
GTF2F1-202ENST00000593678 IGHV6-1A0A0B4J1U7 121 aa8.55□□□□□ -1.04
GTF2F1-202ENST00000593678 A0A1B0GVX0 72 aa8.55□□□□□ -1.04
GTF2F1-202ENST00000593678 C1orf195Q5TG92 126 aa8.55□□□□□ -1.04
GTF2F1-202ENST00000593678 SMIM20Q8N5G0 67 aa8.54□□□□□ -1.04
GTF2F1-202ENST00000593678 WFDC13Q8IUB5 93 aa8.53□□□□□ -1.04
GTF2F1-202ENST00000593678 CASC2Q6XLA1 102 aa8.52□□□□□ -1.05
GTF2F1-202ENST00000593678 KRTAP17-1Q9BYP8 105 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms