RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 LRP1Q07954 4544 aaKnown RBP8.26□□□□□ -1.09
VMP1-217ENST00000593168 ETDBQ3ZM63 59 aa8.25□□□□□ -1.09
VMP1-217ENST00000593168 TEN1Q86WV5 123 aa8.25□□□□□ -1.09
VMP1-217ENST00000593168 HIGD2AQ9BW72 106 aa8.25□□□□□ -1.09
VMP1-217ENST00000593168 FAT3Q8TDW7 4589 aa8.24□□□□□ -1.09
VMP1-217ENST00000593168 C4orf48Q5BLP8 95 aa8.24□□□□□ -1.09
VMP1-217ENST00000593168 PPDPFLQ8WWR9 84 aa8.24□□□□□ -1.09
VMP1-217ENST00000593168 IGLV5-48A0A075B6I7 105 aa8.23□□□□□ -1.09
VMP1-217ENST00000593168 KRTAP29-1A8MX34 341 aaPredicted RBP8.23□□□□□ -1.09
VMP1-217ENST00000593168 ZNF861PO60384 105 aa8.23□□□□□ -1.09
VMP1-217ENST00000593168 IGLV7-43P04211 117 aa8.22□□□□□ -1.09
VMP1-217ENST00000593168 LINC01547P58512 204 aaPredicted RBP8.22□□□□□ -1.09
VMP1-217ENST00000593168 Q8N377 158 aa8.21□□□□□ -1.1
VMP1-217ENST00000593168 ST20-AS1Q8NBB2 130 aa8.21□□□□□ -1.1
VMP1-217ENST00000593168 TEX49A0A1B0GTD5 131 aa8.19□□□□□ -1.1
VMP1-217ENST00000593168 DEFB105AQ8NG35 78 aa8.19□□□□□ -1.1
VMP1-217ENST00000593168 OBSCN-AS1Q96MR7 158 aa8.19□□□□□ -1.1
VMP1-217ENST00000593168 JMJD7-PLA2G4BH0Y9G9 81 aa8.18□□□□□ -1.1
VMP1-217ENST00000593168 PLA2G1BP04054 148 aaKnown RBP8.18□□□□□ -1.1
VMP1-217ENST00000593168 SPRR1BP22528 89 aa8.18□□□□□ -1.1
VMP1-217ENST00000593168 NDUFV3P56181 108 aaKnown RBP8.18□□□□□ -1.1
VMP1-217ENST00000593168 LAMTOR3Q9UHA4 124 aa8.17□□□□□ -1.1
VMP1-217ENST00000593168 PKHD1L1Q86WI1 4243 aa8.16□□□□□ -1.1
VMP1-217ENST00000593168 ZNF706Q9Y5V0 76 aaPredicted RBP8.15□□□□□ -1.1
VMP1-217ENST00000593168 RBM3P98179 157 aaKnown RBP8.14□□□□□ -1.11
VMP1-217ENST00000593168 SPRR4Q96PI1 79 aa8.14□□□□□ -1.11
VMP1-217ENST00000593168 RPL37AP61513 92 aaKnown RBP8.13□□□□□ -1.11
VMP1-217ENST00000593168 GAGE2AQ6NT46 116 aa8.13□□□□□ -1.11
VMP1-217ENST00000593168 SMIM29Q86T20 159 aa8.13□□□□□ -1.11
VMP1-217ENST00000593168 J3QR89 54 aa8.12□□□□□ -1.11
VMP1-217ENST00000593168 KRTAP10-4P60372 401 aaPredicted RBP8.12□□□□□ -1.11
VMP1-217ENST00000593168 LINC00483Q53H64 154 aa8.11□□□□□ -1.11
VMP1-217ENST00000593168 PDE6GP18545 87 aa8.1□□□□□ -1.11
VMP1-217ENST00000593168 C3orf22Q8N5N4 141 aa8.1□□□□□ -1.11
VMP1-217ENST00000593168 DSCR8Q96T75 97 aa8.1□□□□□ -1.11
VMP1-217ENST00000593168 C14orf132Q9NPU4 83 aa8.1□□□□□ -1.11
VMP1-217ENST00000593168 K7ERU9 68 aa8.09□□□□□ -1.11
VMP1-217ENST00000593168 OXTP01178 125 aa8.09□□□□□ -1.11
VMP1-217ENST00000593168 LOC110117498A0A087WWA1 95 aa8.08□□□□□ -1.12
VMP1-217ENST00000593168 TRBV7-4A0A0J9YYF1 115 aa8.08□□□□□ -1.12
VMP1-217ENST00000593168 A0A1B0GV72 72 aa8.08□□□□□ -1.12
VMP1-217ENST00000593168 F8WEM9 126 aa8.08□□□□□ -1.12
VMP1-217ENST00000593168 IGLV8-61A0A075B6I0 122 aa8.07□□□□□ -1.12
VMP1-217ENST00000593168 C21orf62-AS1Q17RA5 79 aa8.07□□□□□ -1.12
VMP1-217ENST00000593168 SPINK6Q6UWN8 80 aa8.07□□□□□ -1.12
VMP1-217ENST00000593168 CCKP06307 115 aa8.05□□□□□ -1.12
VMP1-217ENST00000593168 Q6ZQT0 140 aa8.05□□□□□ -1.12
VMP1-217ENST00000593168 RNF213Q63HN8 5207 aa8.05□□□□□ -1.12
VMP1-217ENST00000593168 FAM240AA0A1B0GVK7 77 aa8.03□□□□□ -1.12
VMP1-217ENST00000593168 Q6JHZ5 121 aa8.03□□□□□ -1.12
VMP1-217ENST00000593168 ACYP1P07311 99 aa8.02□□□□□ -1.13
VMP1-217ENST00000593168 FAM229BQ4G0N7 80 aa8.02□□□□□ -1.13
VMP1-217ENST00000593168 ANAPC11Q9NYG5 84 aa8.01□□□□□ -1.13
VMP1-217ENST00000593168 IGFL1Q6UW32 110 aa8□□□□□ -1.13
VMP1-217ENST00000593168 LRP2P98164 4655 aa7.99□□□□□ -1.13
VMP1-217ENST00000593168 KRTAP1-4P0C5Y4 121 aa7.99□□□□□ -1.13
VMP1-217ENST00000593168 IGLV9-49A0A0B4J1Y8 123 aa7.98□□□□□ -1.13
VMP1-217ENST00000593168 A0A1B0GW54 56 aa7.98□□□□□ -1.13
VMP1-217ENST00000593168 A0A1W2PNM2 257 aa7.98□□□□□ -1.13
VMP1-217ENST00000593168 Q8NBF4 154 aa7.98□□□□□ -1.13
VMP1-217ENST00000593168 LCE2AQ5TA79 106 aaPredicted RBP7.97□□□□□ -1.13
VMP1-217ENST00000593168 C9orf153Q5TBE3 101 aa7.97□□□□□ -1.13
VMP1-217ENST00000593168 VPS25Q9BRG1 176 aa7.97□□□□□ -1.13
VMP1-217ENST00000593168 MT1HL1P0DM35 61 aa7.96□□□□□ -1.14
VMP1-217ENST00000593168 SSBP3-AS1Q7Z2R9 100 aa7.96□□□□□ -1.14
VMP1-217ENST00000593168 TNXBP22105 4242 aa7.96□□□□□ -1.14
VMP1-217ENST00000593168 CRYGAP11844 174 aa7.95□□□□□ -1.14
VMP1-217ENST00000593168 MOBPQ13875 183 aa7.95□□□□□ -1.14
VMP1-217ENST00000593168 Q6Q795 121 aa7.95□□□□□ -1.14
VMP1-217ENST00000593168 A0A087X002 238 aa7.94□□□□□ -1.14
VMP1-217ENST00000593168 A0A0G2JQZ4 141 aa7.94□□□□□ -1.14
VMP1-217ENST00000593168 LINC00846Q9NV44 126 aa7.93□□□□□ -1.14
VMP1-217ENST00000593168 KRTAP13-2Q52LG2 175 aa7.92□□□□□ -1.14
VMP1-217ENST00000593168 LCE2CQ5TA81 110 aa7.92□□□□□ -1.14
VMP1-217ENST00000593168 CDIP1Q9H305 208 aa7.92□□□□□ -1.14
VMP1-217ENST00000593168 CD164Q04900 197 aa7.89□□□□□ -1.15
VMP1-217ENST00000593168 UBL5Q9BZL1 73 aa7.89□□□□□ -1.15
VMP1-217ENST00000593168 TRBV7-7A0A0K0K1E9 115 aa7.87□□□□□ -1.15
VMP1-217ENST00000593168 LINC00643Q86TS7 51 aa7.87□□□□□ -1.15
VMP1-217ENST00000593168 TYMSOSQ8TAI1 123 aa7.87□□□□□ -1.15
VMP1-217ENST00000593168 A0A087WSZ3 146 aa7.86□□□□□ -1.15
VMP1-217ENST00000593168 Q6ZVQ6 151 aa7.86□□□□□ -1.15
VMP1-217ENST00000593168 PRR26Q8N8Z3 221 aa7.86□□□□□ -1.15
VMP1-217ENST00000593168 NREPQ16612 68 aa7.85□□□□□ -1.15
VMP1-217ENST00000593168 HRCT1Q6UXD1 115 aa7.83□□□□□ -1.16
VMP1-217ENST00000593168 SS18L2Q9UHA2 77 aa7.82□□□□□ -1.16
VMP1-217ENST00000593168 ATP5EP2Q5VTU8 51 aa7.8□□□□□ -1.16
VMP1-217ENST00000593168 SPAG11AQ6PDA7 123 aa7.8□□□□□ -1.16
VMP1-217ENST00000593168 SIGMAR1Q99720 223 aa7.8□□□□□ -1.16
VMP1-217ENST00000593168 Q5XG85 94 aa7.78□□□□□ -1.16
VMP1-217ENST00000593168 SPINK1P00995 79 aa7.77□□□□□ -1.17
VMP1-217ENST00000593168 MT-ATP8P03928 68 aa7.77□□□□□ -1.17
VMP1-217ENST00000593168 CXCL6P80162 114 aa7.77□□□□□ -1.17
VMP1-217ENST00000593168 LINC00304Q8N9R0 145 aa7.77□□□□□ -1.17
VMP1-217ENST00000593168 LINC00472Q9H8W2 130 aa7.77□□□□□ -1.17
VMP1-217ENST00000593168 IGKV3D-7A0A0C4DH55 119 aa7.76□□□□□ -1.17
VMP1-217ENST00000593168 BPY2O14599 106 aa7.76□□□□□ -1.17
VMP1-217ENST00000593168 KRTAP10-8P60410 259 aa7.76□□□□□ -1.17
VMP1-217ENST00000593168 RPS29P62273 56 aaKnown RBP7.76□□□□□ -1.17
VMP1-217ENST00000593168 ASB16-AS1Q495Z4 193 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms