RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 HIGD2AQ9BW72 106 aa4.22□□□□□ -1.73
VAT1-209ENST00000592388 MACF1Q9UPN3 7388 aaKnown RBP4.22□□□□□ -1.73
VAT1-209ENST00000592388 MYMXA0A1B0GTQ4 84 aa4.21□□□□□ -1.74
VAT1-209ENST00000592388 PLEKHB2Q96CS7 222 aa4.21□□□□□ -1.74
VAT1-209ENST00000592388 LAMTOR3Q9UHA4 124 aa4.21□□□□□ -1.74
VAT1-209ENST00000592388 ATOX1O00244 68 aa4.2□□□□□ -1.74
VAT1-209ENST00000592388 NCR3O14931 201 aa4.2□□□□□ -1.74
VAT1-209ENST00000592388 NMUP48645 174 aa4.2□□□□□ -1.74
VAT1-209ENST00000592388 LINC00158P58513 81 aa4.2□□□□□ -1.74
VAT1-209ENST00000592388 COX17Q14061 63 aa4.2□□□□□ -1.74
VAT1-209ENST00000592388 GAGE2AQ6NT46 116 aa4.2□□□□□ -1.74
VAT1-209ENST00000592388 ANKRD29Q8N6D5 301 aa4.2□□□□□ -1.74
VAT1-209ENST00000592388 HIST1H4GQ99525 98 aa4.2□□□□□ -1.74
VAT1-209ENST00000592388 FCGBPQ9Y6R7 5405 aaPredicted RBP4.2□□□□□ -1.74
VAT1-209ENST00000592388 TMEM223A0PJW6 202 aa4.19□□□□□ -1.74
VAT1-209ENST00000592388 TRACP01848 142 aa4.19□□□□□ -1.74
VAT1-209ENST00000592388 FXYD2P54710 66 aa4.19□□□□□ -1.74
VAT1-209ENST00000592388 KRTAP19-2Q3LHN2 52 aa4.19□□□□□ -1.74
VAT1-209ENST00000592388 LINC00337Q8N6G1 96 aa4.19□□□□□ -1.74
VAT1-209ENST00000592388 SPRR4Q96PI1 79 aa4.19□□□□□ -1.74
VAT1-209ENST00000592388 M0R2T5 61 aa4.18□□□□□ -1.74
VAT1-209ENST00000592388 NDUFC2O95298 119 aa4.18□□□□□ -1.74
VAT1-209ENST00000592388 IGKCP01834 107 aa4.18□□□□□ -1.74
VAT1-209ENST00000592388 COX7CP15954 63 aa4.18□□□□□ -1.74
VAT1-209ENST00000592388 DAND5Q8N907 189 aa4.18□□□□□ -1.74
VAT1-209ENST00000592388 H3BT86 120 aa4.17□□□□□ -1.74
VAT1-209ENST00000592388 PRYO14603 147 aa4.17□□□□□ -1.74
VAT1-209ENST00000592388 SEC61BP60468 96 aaKnown RBP4.17□□□□□ -1.74
VAT1-209ENST00000592388 ATXN8Q156A1 80 aa4.17□□□□□ -1.74
VAT1-209ENST00000592388 MIR7-3HGQ8N6C7 128 aa4.17□□□□□ -1.74
VAT1-209ENST00000592388 Q8NBF4 154 aa4.17□□□□□ -1.74
VAT1-209ENST00000592388 NAA38Q9BRA0 125 aaKnown RBP4.17□□□□□ -1.74
VAT1-209ENST00000592388 TRBV10-3A0A0K0K1G6 114 aa4.16□□□□□ -1.74
VAT1-209ENST00000592388 SLC25A20O43772 301 aa4.16□□□□□ -1.74
VAT1-209ENST00000592388 SPRR1AP35321 89 aa4.16□□□□□ -1.74
VAT1-209ENST00000592388 PSMB2P49721 201 aa4.16□□□□□ -1.74
VAT1-209ENST00000592388 TSPEAR-AS2P59090 65 aa4.16□□□□□ -1.74
VAT1-209ENST00000592388 SFTA2Q6UW10 78 aa4.16□□□□□ -1.74
VAT1-209ENST00000592388 LINC00643Q86TS7 51 aa4.16□□□□□ -1.74
VAT1-209ENST00000592388 TRAV12-1A0A0B4J245 112 aa4.15□□□□□ -1.75
VAT1-209ENST00000592388 LOC107984156A0A0G2JMH3 177 aa4.15□□□□□ -1.75
VAT1-209ENST00000592388 KRTAP4-16G5E9R7 235 aaPredicted RBP4.15□□□□□ -1.75
VAT1-209ENST00000592388 ARL17AQ8IVW1 177 aa4.15□□□□□ -1.75
VAT1-209ENST00000592388 SMCR5Q8TEV8 140 aa4.15□□□□□ -1.75
VAT1-209ENST00000592388 ETDCA0A1B0GVM5 59 aa4.14□□□□□ -1.75
VAT1-209ENST00000592388 ERC2-IT1O76042 136 aa4.14□□□□□ -1.75
VAT1-209ENST00000592388 COX6CP09669 75 aa4.14□□□□□ -1.75
VAT1-209ENST00000592388 KRTAP13-3Q3SY46 172 aa4.14□□□□□ -1.75
VAT1-209ENST00000592388 PCP2Q8IVA1 136 aa4.14□□□□□ -1.75
VAT1-209ENST00000592388 KCNQ1DNQ9H478 68 aa4.14□□□□□ -1.75
VAT1-209ENST00000592388 NDUFA12Q9UI09 145 aa4.14□□□□□ -1.75
VAT1-209ENST00000592388 ZNF706Q9Y5V0 76 aaPredicted RBP4.14□□□□□ -1.75
VAT1-209ENST00000592388 TRBV10-2A0A0K0K1G8 114 aa4.13□□□□□ -1.75
VAT1-209ENST00000592388 K7ERJ3 54 aa4.13□□□□□ -1.75
VAT1-209ENST00000592388 ATP5EP56381 51 aaPredicted RBP4.13□□□□□ -1.75
VAT1-209ENST00000592388 HERVK_113P61574 105 aa4.13□□□□□ -1.75
VAT1-209ENST00000592388 MOBPQ13875 183 aa4.13□□□□□ -1.75
VAT1-209ENST00000592388 SPAG11AQ6PDA7 123 aa4.13□□□□□ -1.75
VAT1-209ENST00000592388 IGLV9-49A0A0B4J1Y8 123 aa4.12□□□□□ -1.75
VAT1-209ENST00000592388 FAM236AA0A1B0GUQ0 79 aa4.12□□□□□ -1.75
VAT1-209ENST00000592388 FAM236BA0A1B0GV22 79 aa4.12□□□□□ -1.75
VAT1-209ENST00000592388 NPC2P61916 151 aa4.12□□□□□ -1.75
VAT1-209ENST00000592388 LINC00483Q53H64 154 aa4.12□□□□□ -1.75
VAT1-209ENST00000592388 C1orf195Q5TG92 126 aa4.12□□□□□ -1.75
VAT1-209ENST00000592388 FP248Q71RG6 208 aaPredicted RBP4.12□□□□□ -1.75
VAT1-209ENST00000592388 KRTAP19-1Q8IUB9 90 aa4.12□□□□□ -1.75
VAT1-209ENST00000592388 Q9BRP9 147 aa4.12□□□□□ -1.75
VAT1-209ENST00000592388 PRO1854Q9UHT4 67 aa4.12□□□□□ -1.75
VAT1-209ENST00000592388 A0A0B4J2C4 111 aa4.11□□□□□ -1.75
VAT1-209ENST00000592388 SERP1Q9Y6X1 66 aa4.11□□□□□ -1.75
VAT1-209ENST00000592388 TCL1BO95988 128 aa4.1□□□□□ -1.75
VAT1-209ENST00000592388 SOSTDC1Q6X4U4 206 aa4.1□□□□□ -1.75
VAT1-209ENST00000592388 SCGB1D4Q6XE38 83 aa4.1□□□□□ -1.75
VAT1-209ENST00000592388 Q6ZRX8 168 aa4.1□□□□□ -1.75
VAT1-209ENST00000592388 Q8N377 158 aa4.1□□□□□ -1.75
VAT1-209ENST00000592388 SERP2Q8N6R1 65 aa4.1□□□□□ -1.75
VAT1-209ENST00000592388 FLGP20930 4061 aaPredicted RBP4.09□□□□□ -1.75
VAT1-209ENST00000592388 SMIM26A0A096LP01 95 aa4.09□□□□□ -1.75
VAT1-209ENST00000592388 J3QQQ9 107 aa4.09□□□□□ -1.75
VAT1-209ENST00000592388 LEPROTO15243 131 aa4.09□□□□□ -1.75
VAT1-209ENST00000592388 SPINK1P00995 79 aa4.09□□□□□ -1.75
VAT1-209ENST00000592388 HIST1H4AP62805 103 aaKnown RBP4.09□□□□□ -1.75
VAT1-209ENST00000592388 NDUFC1O43677 76 aa4.08□□□□□ -1.76
VAT1-209ENST00000592388 ATP5EP2Q5VTU8 51 aa4.08□□□□□ -1.76
VAT1-209ENST00000592388 Q5XG85 94 aa4.08□□□□□ -1.76
VAT1-209ENST00000592388 ST20-AS1Q8NBB2 130 aa4.08□□□□□ -1.76
VAT1-209ENST00000592388 TRAV23DV6A0A075B6W5 121 aa4.07□□□□□ -1.76
VAT1-209ENST00000592388 IGLV6-57P01721 117 aa4.07□□□□□ -1.76
VAT1-209ENST00000592388 CFC1P0CG37 223 aa4.07□□□□□ -1.76
VAT1-209ENST00000592388 LGALS3P17931 250 aaKnown RBP4.07□□□□□ -1.76
VAT1-209ENST00000592388 CD164Q04900 197 aa4.07□□□□□ -1.76
VAT1-209ENST00000592388 S100A7L2Q5SY68 101 aa4.07□□□□□ -1.76
VAT1-209ENST00000592388 ADAMTSL4-AS1Q5T5F5 129 aa4.07□□□□□ -1.76
VAT1-209ENST00000592388 HRCT1Q6UXD1 115 aa4.07□□□□□ -1.76
VAT1-209ENST00000592388 A0A0J9YXY3 114 aa4.06□□□□□ -1.76
VAT1-209ENST00000592388 ZNF815PA8K554 130 aa4.06□□□□□ -1.76
VAT1-209ENST00000592388 ZNF73O43830 326 aaPredicted RBP4.05□□□□□ -1.76
VAT1-209ENST00000592388 RPS29P62273 56 aaKnown RBP4.05□□□□□ -1.76
VAT1-209ENST00000592388 XP32Q5T750 250 aa4.05□□□□□ -1.76
VAT1-209ENST00000592388 SSBP3-AS1Q7Z2R9 100 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms