RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 BCE1O60756 84 aa12.25□□□□□ -0.45
MBD3-209ENST00000592012 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.25□□□□□ -0.45
MBD3-209ENST00000592012 DNAH17Q9UFH2 4485 aa12.24□□□□□ -0.45
MBD3-209ENST00000592012 F8WEM9 126 aa12.24□□□□□ -0.45
MBD3-209ENST00000592012 BPY2O14599 106 aa12.23□□□□□ -0.45
MBD3-209ENST00000592012 SPACA4Q8TDM5 124 aa12.23□□□□□ -0.45
MBD3-209ENST00000592012 FBN3Q75N90 2809 aa12.23□□□□□ -0.45
MBD3-209ENST00000592012 Q8N9L7 120 aa12.22□□□□□ -0.45
MBD3-209ENST00000592012 IGLV8-61A0A075B6I0 122 aa12.21□□□□□ -0.46
MBD3-209ENST00000592012 IGFL1Q6UW32 110 aa12.21□□□□□ -0.46
MBD3-209ENST00000592012 CYSTM1Q9H1C7 97 aa12.21□□□□□ -0.46
MBD3-209ENST00000592012 IGKV4-1P06312 121 aa12.2□□□□□ -0.46
MBD3-209ENST00000592012 A0A0G2JQZ4 141 aa12.2□□□□□ -0.46
MBD3-209ENST00000592012 UBE2AP49459 152 aa12.2□□□□□ -0.46
MBD3-209ENST00000592012 SPRR1BP22528 89 aa12.18□□□□□ -0.46
MBD3-209ENST00000592012 TRAV7A0A075B6U4 112 aa12.17□□□□□ -0.46
MBD3-209ENST00000592012 RTL8CO15255 209 aa12.17□□□□□ -0.46
MBD3-209ENST00000592012 KRTAP13-1Q8IUC0 172 aa12.17□□□□□ -0.46
MBD3-209ENST00000592012 SMIM20Q8N5G0 67 aa12.15□□□□□ -0.46
MBD3-209ENST00000592012 DNAH8Q96JB1 4490 aa12.12□□□□□ -0.47
MBD3-209ENST00000592012 C1orf134Q5TEV5 83 aa12.12□□□□□ -0.47
MBD3-209ENST00000592012 DNAH6Q9C0G6 4158 aa12.11□□□□□ -0.47
MBD3-209ENST00000592012 FRAS1Q86XX4 4008 aa12.1□□□□□ -0.47
MBD3-209ENST00000592012 LY6G6CO95867 125 aa12.09□□□□□ -0.47
MBD3-209ENST00000592012 DSCR10P59022 87 aa12.09□□□□□ -0.47
MBD3-209ENST00000592012 C20orf197Q8N268 126 aa12.09□□□□□ -0.47
MBD3-209ENST00000592012 A0A087WSZ3 146 aa12.06□□□□□ -0.48
MBD3-209ENST00000592012 PLAC8Q9NZF1 115 aa12.06□□□□□ -0.48
MBD3-209ENST00000592012 IGLV5-52A0A0A0MRZ9 124 aa12.06□□□□□ -0.48
MBD3-209ENST00000592012 PSORS1C2Q9UIG4 136 aa12.03□□□□□ -0.48
MBD3-209ENST00000592012 K7EQZ3 153 aa12.02□□□□□ -0.49
MBD3-209ENST00000592012 TMEM258P61165 79 aa12.02□□□□□ -0.49
MBD3-209ENST00000592012 DNAH5Q8TE73 4624 aa12.01□□□□□ -0.49
MBD3-209ENST00000592012 OCR1Q9BZK8 76 aa12.01□□□□□ -0.49
MBD3-209ENST00000592012 DNAH11Q96DT5 4516 aa12□□□□□ -0.49
MBD3-209ENST00000592012 KLKP1Q107X0 134 aa12□□□□□ -0.49
MBD3-209ENST00000592012 DEFB116Q30KQ4 102 aa11.99□□□□□ -0.49
MBD3-209ENST00000592012 WWC2-AS2Q96NR7 200 aa11.97□□□□□ -0.49
MBD3-209ENST00000592012 LINC00483Q53H64 154 aa11.96□□□□□ -0.49
MBD3-209ENST00000592012 SNURFQ9Y675 71 aa11.96□□□□□ -0.49
MBD3-209ENST00000592012 ALMS1Q8TCU4 4167 aa11.95□□□□□ -0.5
MBD3-209ENST00000592012 H7BZZ5 65 aa11.94□□□□□ -0.5
MBD3-209ENST00000592012 ZNF861PO60384 105 aa11.93□□□□□ -0.5
MBD3-209ENST00000592012 HYDINQ4G0P3 5121 aa11.93□□□□□ -0.5
MBD3-209ENST00000592012 IGLV9-49A0A0B4J1Y8 123 aa11.92□□□□□ -0.5
MBD3-209ENST00000592012 LINC00472Q9H8W2 130 aa11.91□□□□□ -0.5
MBD3-209ENST00000592012 ZNF706Q9Y5V0 76 aaPredicted RBP11.91□□□□□ -0.5
MBD3-209ENST00000592012 TMEM254Q8TBM7 123 aa11.91□□□□□ -0.5
MBD3-209ENST00000592012 KRTAP10-2P60368 255 aa11.9□□□□□ -0.5
MBD3-209ENST00000592012 HCG22E2RYF7 251 aa11.9□□□□□ -0.51
MBD3-209ENST00000592012 FAT2Q9NYQ8 4349 aa11.89□□□□□ -0.51
MBD3-209ENST00000592012 RPL37AP61513 92 aaKnown RBP11.89□□□□□ -0.51
MBD3-209ENST00000592012 FAM30AQ9NZY2 134 aa11.89□□□□□ -0.51
MBD3-209ENST00000592012 PKD1P98161 4303 aa11.88□□□□□ -0.51
MBD3-209ENST00000592012 RPS28P62857 69 aaKnown RBP11.86□□□□□ -0.51
MBD3-209ENST00000592012 ANAPC11Q9NYG5 84 aa11.85□□□□□ -0.51
MBD3-209ENST00000592012 J3KT08 172 aa11.84□□□□□ -0.51
MBD3-209ENST00000592012 A0A0U1RQV1 116 aa11.83□□□□□ -0.52
MBD3-209ENST00000592012 NDUFC1O43677 76 aa11.83□□□□□ -0.52
MBD3-209ENST00000592012 IGLV7-43P04211 117 aa11.83□□□□□ -0.52
MBD3-209ENST00000592012 CIRBP-AS1Q8TBR5 109 aa11.83□□□□□ -0.52
MBD3-209ENST00000592012 PRR15Q8IV56 129 aa11.82□□□□□ -0.52
MBD3-209ENST00000592012 LCE6AA0A183 80 aa11.82□□□□□ -0.52
MBD3-209ENST00000592012 A8MWP4 228 aa11.82□□□□□ -0.52
MBD3-209ENST00000592012 FAM236DA0A1B0GTK5 79 aa11.81□□□□□ -0.52
MBD3-209ENST00000592012 FAM236CP0DP71 79 aa11.81□□□□□ -0.52
MBD3-209ENST00000592012 MOBPQ13875 183 aa11.81□□□□□ -0.52
MBD3-209ENST00000592012 WFDC13Q8IUB5 93 aa11.8□□□□□ -0.52
MBD3-209ENST00000592012 KRTAP29-1A8MX34 341 aaPredicted RBP11.78□□□□□ -0.52
MBD3-209ENST00000592012 HRCT1Q6UXD1 115 aa11.78□□□□□ -0.52
MBD3-209ENST00000592012 Q96NJ1 140 aa11.77□□□□□ -0.52
MBD3-209ENST00000592012 LRP1BQ9NZR2 4599 aa11.77□□□□□ -0.52
MBD3-209ENST00000592012 Q6ZSA8 131 aa11.76□□□□□ -0.53
MBD3-209ENST00000592012 KRTAP10-1P60331 282 aa11.75□□□□□ -0.53
MBD3-209ENST00000592012 OXTP01178 125 aa11.74□□□□□ -0.53
MBD3-209ENST00000592012 CASC2Q6XLA1 102 aa11.72□□□□□ -0.53
MBD3-209ENST00000592012 C5orf47Q569G3 176 aa11.72□□□□□ -0.53
MBD3-209ENST00000592012 SACSQ9NZJ4 4579 aa11.69□□□□□ -0.54
MBD3-209ENST00000592012 NDUFB1O75438 58 aa11.69□□□□□ -0.54
MBD3-209ENST00000592012 ZCCHC13Q8WW36 166 aaKnown RBP11.68□□□□□ -0.54
MBD3-209ENST00000592012 VPS13BQ7Z7G8 4022 aa11.66□□□□□ -0.54
MBD3-209ENST00000592012 MMP24-AS1A0A0U1RRL7 71 aa11.66□□□□□ -0.54
MBD3-209ENST00000592012 SERP1Q9Y6X1 66 aa11.65□□□□□ -0.54
MBD3-209ENST00000592012 ATP5EP56381 51 aaPredicted RBP11.64□□□□□ -0.55
MBD3-209ENST00000592012 hDV103S1A0JD37 113 aa11.61□□□□□ -0.55
MBD3-209ENST00000592012 PKHD1P08F94 4074 aa11.61□□□□□ -0.55
MBD3-209ENST00000592012 ASB16-AS1Q495Z4 193 aa11.6□□□□□ -0.55
MBD3-209ENST00000592012 SSBP3-AS1Q7Z2R9 100 aa11.6□□□□□ -0.55
MBD3-209ENST00000592012 MP68P56378 58 aa11.59□□□□□ -0.55
MBD3-209ENST00000592012 CD164Q04900 197 aa11.57□□□□□ -0.56
MBD3-209ENST00000592012 A0A1B0GVX0 72 aa11.57□□□□□ -0.56
MBD3-209ENST00000592012 C8orf17Q9NRJ1 99 aa11.57□□□□□ -0.56
MBD3-209ENST00000592012 A0A087X002 238 aa11.55□□□□□ -0.56
MBD3-209ENST00000592012 IGHV6-1A0A0B4J1U7 121 aa11.55□□□□□ -0.56
MBD3-209ENST00000592012 CDK2AP2O75956 126 aa11.54□□□□□ -0.56
MBD3-209ENST00000592012 LINC00208Q96KT6 92 aa11.54□□□□□ -0.56
MBD3-209ENST00000592012 H0Y9P7 68 aa11.53□□□□□ -0.56
MBD3-209ENST00000592012 KRTAP13-2Q52LG2 175 aa11.52□□□□□ -0.57
MBD3-209ENST00000592012 H3BPC8 53 aa11.5□□□□□ -0.57
MBD3-209ENST00000592012 TRAV22A0A0B4J277 110 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms