RNA–Protein interactions for RNA: ENST00000591974.5

LINC01539-205, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-205ENST00000591974 GAGE2AQ6NT46 116 aa6.45□□□□□ -1.38
LINC01539-205ENST00000591974 SPRR1BP22528 89 aa6.45□□□□□ -1.38
LINC01539-205ENST00000591974 Q6ZQT0 140 aa6.45□□□□□ -1.38
LINC01539-205ENST00000591974 VPS25Q9BRG1 176 aa6.45□□□□□ -1.38
LINC01539-205ENST00000591974 IGLV7-43P04211 117 aa6.44□□□□□ -1.38
LINC01539-205ENST00000591974 C3orf22Q8N5N4 141 aa6.44□□□□□ -1.38
LINC01539-205ENST00000591974 HAMPP81172 84 aa6.43□□□□□ -1.38
LINC01539-205ENST00000591974 SMIM29Q86T20 159 aa6.43□□□□□ -1.38
LINC01539-205ENST00000591974 CDIP1Q9H305 208 aa6.43□□□□□ -1.38
LINC01539-205ENST00000591974 LRP1BQ9NZR2 4599 aa6.43□□□□□ -1.38
LINC01539-205ENST00000591974 ZNF706Q9Y5V0 76 aaPredicted RBP6.43□□□□□ -1.38
LINC01539-205ENST00000591974 F8WEM9 126 aa6.41□□□□□ -1.38
LINC01539-205ENST00000591974 SRRM2Q9UQ35 2752 aaKnown RBP6.41□□□□□ -1.38
LINC01539-205ENST00000591974 SPRR4Q96PI1 79 aa6.41□□□□□ -1.38
LINC01539-205ENST00000591974 IGLV8-61A0A075B6I0 122 aa6.39□□□□□ -1.39
LINC01539-205ENST00000591974 LINC00483Q53H64 154 aa6.39□□□□□ -1.39
LINC01539-205ENST00000591974 DYNC1H1Q14204 4646 aaKnown RBP6.38□□□□□ -1.39
LINC01539-205ENST00000591974 XGP55808 180 aa6.38□□□□□ -1.39
LINC01539-205ENST00000591974 LINC00846Q9NV44 126 aa6.37□□□□□ -1.39
LINC01539-205ENST00000591974 Q6JHZ5 121 aa6.36□□□□□ -1.39
LINC01539-205ENST00000591974 VPS13BQ7Z7G8 4022 aa6.35□□□□□ -1.39
LINC01539-205ENST00000591974 A0A1B0GW54 56 aa6.35□□□□□ -1.39
LINC01539-205ENST00000591974 IGFL1Q6UW32 110 aa6.34□□□□□ -1.39
LINC01539-205ENST00000591974 LINC00643Q86TS7 51 aa6.34□□□□□ -1.39
LINC01539-205ENST00000591974 Q8NBF4 154 aa6.34□□□□□ -1.39
LINC01539-205ENST00000591974 SIGMAR1Q99720 223 aa6.34□□□□□ -1.39
LINC01539-205ENST00000591974 A0A1W2PNM2 257 aa6.34□□□□□ -1.39
LINC01539-205ENST00000591974 UBL5Q9BZL1 73 aa6.34□□□□□ -1.39
LINC01539-205ENST00000591974 RPL37AP61513 92 aaKnown RBP6.33□□□□□ -1.4
LINC01539-205ENST00000591974 APOBP04114 4563 aaKnown RBP6.33□□□□□ -1.4
LINC01539-205ENST00000591974 RYR3Q15413 4870 aa6.33□□□□□ -1.4
LINC01539-205ENST00000591974 MT-ATP8P03928 68 aa6.32□□□□□ -1.4
LINC01539-205ENST00000591974 IGLV9-49A0A0B4J1Y8 123 aa6.31□□□□□ -1.4
LINC01539-205ENST00000591974 CRYGAP11844 174 aa6.31□□□□□ -1.4
LINC01539-205ENST00000591974 LORP23490 312 aaPredicted RBP6.31□□□□□ -1.4
LINC01539-205ENST00000591974 C9orf153Q5TBE3 101 aa6.3□□□□□ -1.4
LINC01539-205ENST00000591974 Q6Q795 121 aa6.3□□□□□ -1.4
LINC01539-205ENST00000591974 SMR3BP02814 79 aaPredicted RBP6.3□□□□□ -1.4
LINC01539-205ENST00000591974 Q6ZVQ6 151 aa6.3□□□□□ -1.4
LINC01539-205ENST00000591974 ANAPC11Q9NYG5 84 aa6.3□□□□□ -1.4
LINC01539-205ENST00000591974 A0A0G2JQZ4 141 aa6.29□□□□□ -1.4
LINC01539-205ENST00000591974 ATP5EP2Q5VTU8 51 aa6.29□□□□□ -1.4
LINC01539-205ENST00000591974 MOBPQ13875 183 aa6.28□□□□□ -1.4
LINC01539-205ENST00000591974 FAM229BQ4G0N7 80 aa6.28□□□□□ -1.4
LINC01539-205ENST00000591974 SPINK6Q6UWN8 80 aa6.28□□□□□ -1.4
LINC01539-205ENST00000591974 TRBV7-7A0A0K0K1E9 115 aa6.28□□□□□ -1.4
LINC01539-205ENST00000591974 CDK2AP2O75956 126 aa6.27□□□□□ -1.41
LINC01539-205ENST00000591974 NREPQ16612 68 aa6.26□□□□□ -1.41
LINC01539-205ENST00000591974 IMUPQ9GZP8 106 aa6.26□□□□□ -1.41
LINC01539-205ENST00000591974 KRTAP1-4P0C5Y4 121 aa6.26□□□□□ -1.41
LINC01539-205ENST00000591974 KRTAP10-4P60372 401 aaPredicted RBP6.26□□□□□ -1.41
LINC01539-205ENST00000591974 A0A087WSZ3 146 aa6.24□□□□□ -1.41
LINC01539-205ENST00000591974 IGKV3D-7A0A0C4DH55 119 aa6.24□□□□□ -1.41
LINC01539-205ENST00000591974 FAM229AH3BQW9 127 aa6.24□□□□□ -1.41
LINC01539-205ENST00000591974 CXCL6P80162 114 aa6.24□□□□□ -1.41
LINC01539-205ENST00000591974 SSBP3-AS1Q7Z2R9 100 aa6.24□□□□□ -1.41
LINC01539-205ENST00000591974 A0A087X002 238 aa6.24□□□□□ -1.41
LINC01539-205ENST00000591974 PLA2G1BP04054 148 aaKnown RBP6.22□□□□□ -1.41
LINC01539-205ENST00000591974 SCGB1A1P11684 91 aa6.22□□□□□ -1.41
LINC01539-205ENST00000591974 FAT1Q14517 4588 aa6.22□□□□□ -1.41
LINC01539-205ENST00000591974 KRTAP13-2Q52LG2 175 aa6.22□□□□□ -1.41
LINC01539-205ENST00000591974 CD164Q04900 197 aa6.21□□□□□ -1.42
LINC01539-205ENST00000591974 BPY2O14599 106 aa6.2□□□□□ -1.42
LINC01539-205ENST00000591974 HSPG2P98160 4391 aa6.2□□□□□ -1.42
LINC01539-205ENST00000591974 HRCT1Q6UXD1 115 aa6.19□□□□□ -1.42
LINC01539-205ENST00000591974 SS18L2Q9UHA2 77 aa6.19□□□□□ -1.42
LINC01539-205ENST00000591974 HIST1H4AP62805 103 aaKnown RBP6.17□□□□□ -1.42
LINC01539-205ENST00000591974 Q5VSD8 79 aa6.17□□□□□ -1.42
LINC01539-205ENST00000591974 PKHD1L1Q86WI1 4243 aa6.16□□□□□ -1.42
LINC01539-205ENST00000591974 TYMSOSQ8TAI1 123 aa6.16□□□□□ -1.42
LINC01539-205ENST00000591974 LINC00472Q9H8W2 130 aa6.16□□□□□ -1.42
LINC01539-205ENST00000591974 A0A087WVE0 104 aa6.14□□□□□ -1.43
LINC01539-205ENST00000591974 RYR1P21817 5038 aa6.14□□□□□ -1.43
LINC01539-205ENST00000591974 FAM236AA0A1B0GUQ0 79 aa6.13□□□□□ -1.43
LINC01539-205ENST00000591974 FAM236BA0A1B0GV22 79 aa6.13□□□□□ -1.43
LINC01539-205ENST00000591974 J3KT08 172 aa6.13□□□□□ -1.43
LINC01539-205ENST00000591974 IGKV4-1P06312 121 aa6.13□□□□□ -1.43
LINC01539-205ENST00000591974 DSCR10P59022 87 aa6.13□□□□□ -1.43
LINC01539-205ENST00000591974 PRR26Q8N8Z3 221 aa6.13□□□□□ -1.43
LINC01539-205ENST00000591974 Q96NJ1 140 aa6.13□□□□□ -1.43
LINC01539-205ENST00000591974 DEFB116Q30KQ4 102 aa6.12□□□□□ -1.43
LINC01539-205ENST00000591974 ASB16-AS1Q495Z4 193 aa6.12□□□□□ -1.43
LINC01539-205ENST00000591974 Q5XG85 94 aa6.12□□□□□ -1.43
LINC01539-205ENST00000591974 Q8N9L7 120 aa6.12□□□□□ -1.43
LINC01539-205ENST00000591974 Q8N1X5 172 aa6.11□□□□□ -1.43
LINC01539-205ENST00000591974 EPPK1P58107 5090 aaKnown RBP6.1□□□□□ -1.43
LINC01539-205ENST00000591974 K7EQZ3 153 aa6.1□□□□□ -1.43
LINC01539-205ENST00000591974 SPINK1P00995 79 aa6.1□□□□□ -1.43
LINC01539-205ENST00000591974 LIMD2Q9BT23 127 aa6.1□□□□□ -1.43
LINC01539-205ENST00000591974 A8MWP4 228 aa6.09□□□□□ -1.43
LINC01539-205ENST00000591974 SPAG11AQ6PDA7 123 aa6.09□□□□□ -1.43
LINC01539-205ENST00000591974 LINC00304Q8N9R0 145 aa6.09□□□□□ -1.43
LINC01539-205ENST00000591974 RPS29P62273 56 aaKnown RBP6.09□□□□□ -1.44
LINC01539-205ENST00000591974 KIAA1109Q2LD37 5005 aa6.08□□□□□ -1.44
LINC01539-205ENST00000591974 ATOX1O00244 68 aa6.08□□□□□ -1.44
LINC01539-205ENST00000591974 PCP4P48539 62 aa6.07□□□□□ -1.44
LINC01539-205ENST00000591974 PRR15Q8IV56 129 aa6.07□□□□□ -1.44
LINC01539-205ENST00000591974 KRTAP17-1Q9BYP8 105 aa6.07□□□□□ -1.44
LINC01539-205ENST00000591974 NDUFB1O75438 58 aa6.07□□□□□ -1.44
LINC01539-205ENST00000591974 ANAPC13Q9BS18 74 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms