RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 J3QKU1 62 aa7.87□□□□□ -1.15
SMARCA4-217ENST00000591595 DEFB105AQ8NG35 78 aa7.87□□□□□ -1.15
SMARCA4-217ENST00000591595 IGKV2D-24A0A075B6R9 120 aa7.87□□□□□ -1.15
SMARCA4-217ENST00000591595 H0Y9P7 68 aa7.87□□□□□ -1.15
SMARCA4-217ENST00000591595 A0A1B0GW54 56 aa7.86□□□□□ -1.15
SMARCA4-217ENST00000591595 ASB16-AS1Q495Z4 193 aa7.86□□□□□ -1.15
SMARCA4-217ENST00000591595 WFDC13Q8IUB5 93 aa7.86□□□□□ -1.15
SMARCA4-217ENST00000591595 HIVEP1P15822 2718 aa7.85□□□□□ -1.15
SMARCA4-217ENST00000591595 CNBPP62633 177 aaKnown RBP7.85□□□□□ -1.15
SMARCA4-217ENST00000591595 EGFEM1PQ0D2K5 195 aa7.85□□□□□ -1.15
SMARCA4-217ENST00000591595 H3BPC8 53 aa7.85□□□□□ -1.15
SMARCA4-217ENST00000591595 A0A1W2PNM2 257 aa7.84□□□□□ -1.15
SMARCA4-217ENST00000591595 C9orf163Q8N9P6 203 aa7.84□□□□□ -1.15
SMARCA4-217ENST00000591595 LINC00528Q8N1L1 170 aa7.83□□□□□ -1.16
SMARCA4-217ENST00000591595 IGLV5-48A0A075B6I7 105 aa7.82□□□□□ -1.16
SMARCA4-217ENST00000591595 NSD1Q96L73 2696 aaPredicted RBP7.82□□□□□ -1.16
SMARCA4-217ENST00000591595 OTOGQ6ZRI0 2925 aa7.81□□□□□ -1.16
SMARCA4-217ENST00000591595 IGLV7-46A0A075B6I9 117 aa7.8□□□□□ -1.16
SMARCA4-217ENST00000591595 RTL8CO15255 209 aa7.8□□□□□ -1.16
SMARCA4-217ENST00000591595 C15orf56Q8N910 161 aa7.8□□□□□ -1.16
SMARCA4-217ENST00000591595 CSAG1Q6PB30 78 aa7.79□□□□□ -1.16
SMARCA4-217ENST00000591595 Q8NBF4 154 aa7.79□□□□□ -1.16
SMARCA4-217ENST00000591595 F8P00451 2351 aa7.79□□□□□ -1.16
SMARCA4-217ENST00000591595 PKD1L1Q8TDX9 2849 aa7.79□□□□□ -1.16
SMARCA4-217ENST00000591595 TRRAPQ9Y4A5 3859 aa7.78□□□□□ -1.16
SMARCA4-217ENST00000591595 C1orf137Q5JT78 98 aa7.78□□□□□ -1.16
SMARCA4-217ENST00000591595 Q8N377 158 aa7.77□□□□□ -1.16
SMARCA4-217ENST00000591595 RPL37AP8A6NKH3 93 aa7.77□□□□□ -1.17
SMARCA4-217ENST00000591595 A0A087X002 238 aa7.76□□□□□ -1.17
SMARCA4-217ENST00000591595 IGLV1-50A0A075B6I6 118 aa7.75□□□□□ -1.17
SMARCA4-217ENST00000591595 DEFB131BA0A096LNP1 70 aa7.75□□□□□ -1.17
SMARCA4-217ENST00000591595 C1orf134Q5TEV5 83 aa7.75□□□□□ -1.17
SMARCA4-217ENST00000591595 KRTAP26-1Q6PEX3 210 aa7.75□□□□□ -1.17
SMARCA4-217ENST00000591595 SPRR4Q96PI1 79 aa7.75□□□□□ -1.17
SMARCA4-217ENST00000591595 Q6ZR54 194 aa7.74□□□□□ -1.17
SMARCA4-217ENST00000591595 C7orf33Q8WU49 177 aa7.74□□□□□ -1.17
SMARCA4-217ENST00000591595 H3BNG1 76 aa7.73□□□□□ -1.17
SMARCA4-217ENST00000591595 LINC01556Q5JQF7 62 aa7.71□□□□□ -1.18
SMARCA4-217ENST00000591595 KRTAP29-1A8MX34 341 aaPredicted RBP7.71□□□□□ -1.18
SMARCA4-217ENST00000591595 PCOTHQ58A44 107 aa7.71□□□□□ -1.18
SMARCA4-217ENST00000591595 TENM3Q9P273 2699 aa7.7□□□□□ -1.18
SMARCA4-217ENST00000591595 NOTCH1P46531 2555 aa7.7□□□□□ -1.18
SMARCA4-217ENST00000591595 IGHV6-1A0A0B4J1U7 121 aa7.7□□□□□ -1.18
SMARCA4-217ENST00000591595 A0A0A0MQY5 61 aa7.69□□□□□ -1.18
SMARCA4-217ENST00000591595 FAM168BA1KXE4 195 aa7.69□□□□□ -1.18
SMARCA4-217ENST00000591595 FLNBO75369 2602 aaKnown RBP7.69□□□□□ -1.18
SMARCA4-217ENST00000591595 TNP2Q05952 138 aa7.69□□□□□ -1.18
SMARCA4-217ENST00000591595 KRTAP10-11P60412 298 aa7.68□□□□□ -1.18
SMARCA4-217ENST00000591595 DHRS4-AS1Q9P1J3 65 aa7.68□□□□□ -1.18
SMARCA4-217ENST00000591595 MAST4O15021 2626 aa7.68□□□□□ -1.18
SMARCA4-217ENST00000591595 BAHCC1Q9P281 2608 aa7.68□□□□□ -1.18
SMARCA4-217ENST00000591595 STAB1Q9NY15 2570 aa7.68□□□□□ -1.18
SMARCA4-217ENST00000591595 Q6ZRX8 168 aa7.67□□□□□ -1.18
SMARCA4-217ENST00000591595 IGLV5-37A0A075B6J1 123 aa7.67□□□□□ -1.18
SMARCA4-217ENST00000591595 HRES1P13985 223 aa7.66□□□□□ -1.18
SMARCA4-217ENST00000591595 ROMO1P60602 79 aa7.65□□□□□ -1.19
SMARCA4-217ENST00000591595 RPL37AP61513 92 aaKnown RBP7.64□□□□□ -1.19
SMARCA4-217ENST00000591595 CASC10Q5T4H9 136 aa7.64□□□□□ -1.19
SMARCA4-217ENST00000591595 DNAH10OSP0CZ25 163 aa7.62□□□□□ -1.19
SMARCA4-217ENST00000591595 IGKV2-24A0A0C4DH68 120 aa7.6□□□□□ -1.19
SMARCA4-217ENST00000591595 SPATA8Q6RVD6 105 aa7.6□□□□□ -1.19
SMARCA4-217ENST00000591595 A0A0G2JQZ4 141 aa7.59□□□□□ -1.19
SMARCA4-217ENST00000591595 A0A1W2PNN7 141 aa7.59□□□□□ -1.19
SMARCA4-217ENST00000591595 TLX1NBP0CAT3 122 aa7.59□□□□□ -1.19
SMARCA4-217ENST00000591595 COL6A5A8TX70 2615 aa7.58□□□□□ -1.2
SMARCA4-217ENST00000591595 REG3GQ6UW15 175 aa7.57□□□□□ -1.2
SMARCA4-217ENST00000591595 FBN1P35555 2871 aaKnown RBP7.57□□□□□ -1.2
SMARCA4-217ENST00000591595 PLA2G2DQ9UNK4 145 aa7.57□□□□□ -1.2
SMARCA4-217ENST00000591595 A0A087WSZ3 146 aa7.56□□□□□ -1.2
SMARCA4-217ENST00000591595 KRTAP4-16G5E9R7 235 aaPredicted RBP7.56□□□□□ -1.2
SMARCA4-217ENST00000591595 PRLHP81277 87 aa7.56□□□□□ -1.2
SMARCA4-217ENST00000591595 SPRR1AP35321 89 aa7.55□□□□□ -1.2
SMARCA4-217ENST00000591595 NBEAL1Q6ZS30 2694 aa7.54□□□□□ -1.2
SMARCA4-217ENST00000591595 KRTAP7-1Q8IUC3 87 aa7.54□□□□□ -1.2
SMARCA4-217ENST00000591595 MIR22HGQ0VDD5 57 aa7.54□□□□□ -1.2
SMARCA4-217ENST00000591595 A8MWP4 228 aa7.52□□□□□ -1.21
SMARCA4-217ENST00000591595 KRTAP24-1Q3LI83 254 aa7.51□□□□□ -1.21
SMARCA4-217ENST00000591595 KMT2BQ9UMN6 2715 aaPredicted RBP7.51□□□□□ -1.21
SMARCA4-217ENST00000591595 IGFL1Q6UW32 110 aa7.51□□□□□ -1.21
SMARCA4-217ENST00000591595 A0A1B0GU69 56 aa7.5□□□□□ -1.21
SMARCA4-217ENST00000591595 A0A096LNI7 61 aa7.48□□□□□ -1.21
SMARCA4-217ENST00000591595 MGAM2Q2M2H8 2515 aa7.48□□□□□ -1.21
SMARCA4-217ENST00000591595 UQCR11O14957 56 aa7.48□□□□□ -1.21
SMARCA4-217ENST00000591595 ZNF861PO60384 105 aa7.48□□□□□ -1.21
SMARCA4-217ENST00000591595 UBE2DNLQ8IWF7 75 aa7.46□□□□□ -1.22
SMARCA4-217ENST00000591595 MMP24-AS1A0A0U1RRL7 71 aa7.45□□□□□ -1.22
SMARCA4-217ENST00000591595 P0C880 135 aa7.45□□□□□ -1.22
SMARCA4-217ENST00000591595 TP53AIP1Q9HCN2 124 aa7.45□□□□□ -1.22
SMARCA4-217ENST00000591595 KRTAP25-1Q3LHN0 102 aa7.44□□□□□ -1.22
SMARCA4-217ENST00000591595 CHTF8P0CG12 524 aa7.43□□□□□ -1.22
SMARCA4-217ENST00000591595 STAB2Q8WWQ8 2551 aa7.43□□□□□ -1.22
SMARCA4-217ENST00000591595 ANK2Q01484 3957 aa7.42□□□□□ -1.22
SMARCA4-217ENST00000591595 SRRM2Q9UQ35 2752 aaKnown RBP7.4□□□□□ -1.22
SMARCA4-217ENST00000591595 KRTAP1-5Q9BYS1 174 aa7.4□□□□□ -1.22
SMARCA4-217ENST00000591595 LINC00472Q9H8W2 130 aa7.39□□□□□ -1.23
SMARCA4-217ENST00000591595 ACYP2P14621 99 aa7.38□□□□□ -1.23
SMARCA4-217ENST00000591595 K7EIL1 84 aa7.37□□□□□ -1.23
SMARCA4-217ENST00000591595 KRTAP11-1Q8IUC1 163 aa7.35□□□□□ -1.23
SMARCA4-217ENST00000591595 IGLV8-61A0A075B6I0 122 aa7.34□□□□□ -1.23
SMARCA4-217ENST00000591595 C14orf177Q52M58 125 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms