RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 Q8NBF4 154 aa5.88□□□□□ -1.47
VPS4B-207ENST00000591519 TRAV13-2A0A0B4J235 113 aa5.87□□□□□ -1.47
VPS4B-207ENST00000591519 PYY3Q5JQD4 70 aa5.87□□□□□ -1.47
VPS4B-207ENST00000591519 SLC25A34Q6PIV7 304 aa5.87□□□□□ -1.47
VPS4B-207ENST00000591519 DLEU1O43261 78 aa5.86□□□□□ -1.47
VPS4B-207ENST00000591519 ASB16-AS1Q495Z4 193 aa5.86□□□□□ -1.47
VPS4B-207ENST00000591519 SSBP3-AS1Q7Z2R9 100 aa5.86□□□□□ -1.47
VPS4B-207ENST00000591519 SMIM11BQ8TCY0 68 aa5.86□□□□□ -1.47
VPS4B-207ENST00000591519 ELOF1P60002 83 aaKnown RBP5.85□□□□□ -1.47
VPS4B-207ENST00000591519 RPS29P62273 56 aaKnown RBP5.85□□□□□ -1.47
VPS4B-207ENST00000591519 MOBPQ13875 183 aa5.85□□□□□ -1.47
VPS4B-207ENST00000591519 H7C2G1 150 aa5.84□□□□□ -1.47
VPS4B-207ENST00000591519 C2orf91Q6ZV80 131 aa5.84□□□□□ -1.47
VPS4B-207ENST00000591519 DEFB105AQ8NG35 78 aa5.84□□□□□ -1.47
VPS4B-207ENST00000591519 DHRS4-AS1Q9P1J3 65 aa5.84□□□□□ -1.47
VPS4B-207ENST00000591519 C9orf153Q5TBE3 101 aa5.83□□□□□ -1.48
VPS4B-207ENST00000591519 A0A1B0GWB2 263 aa5.82□□□□□ -1.48
VPS4B-207ENST00000591519 TAL2Q16559 108 aa5.82□□□□□ -1.48
VPS4B-207ENST00000591519 Q8N377 158 aa5.82□□□□□ -1.48
VPS4B-207ENST00000591519 HIGD1BQ9P298 99 aa5.82□□□□□ -1.48
VPS4B-207ENST00000591519 TRBV7-6A0A0J9YX20 115 aa5.81□□□□□ -1.48
VPS4B-207ENST00000591519 SEC61BP60468 96 aaKnown RBP5.81□□□□□ -1.48
VPS4B-207ENST00000591519 RAB37Q96AX2 223 aa5.81□□□□□ -1.48
VPS4B-207ENST00000591519 SLC25A20O43772 301 aa5.8□□□□□ -1.48
VPS4B-207ENST00000591519 CFC1BP0CG36 223 aa5.8□□□□□ -1.48
VPS4B-207ENST00000591519 CFC1P0CG37 223 aa5.8□□□□□ -1.48
VPS4B-207ENST00000591519 KRTAP4-1Q9BYQ7 146 aa5.8□□□□□ -1.48
VPS4B-207ENST00000591519 VAMP3Q15836 100 aa5.79□□□□□ -1.48
VPS4B-207ENST00000591519 Q1RN00 199 aa5.79□□□□□ -1.48
VPS4B-207ENST00000591519 CEND1Q8N111 149 aa5.79□□□□□ -1.48
VPS4B-207ENST00000591519 FXYD2P54710 66 aa5.77□□□□□ -1.49
VPS4B-207ENST00000591519 LINC01547P58512 204 aaPredicted RBP5.77□□□□□ -1.49
VPS4B-207ENST00000591519 HRCT1Q6UXD1 115 aa5.77□□□□□ -1.49
VPS4B-207ENST00000591519 PRO1933Q9H354 126 aa5.77□□□□□ -1.49
VPS4B-207ENST00000591519 LAMTOR3Q9UHA4 124 aa5.77□□□□□ -1.49
VPS4B-207ENST00000591519 TEX49A0A1B0GTD5 131 aa5.76□□□□□ -1.49
VPS4B-207ENST00000591519 SPRR1BP22528 89 aa5.76□□□□□ -1.49
VPS4B-207ENST00000591519 LINC00575Q6W349 94 aa5.76□□□□□ -1.49
VPS4B-207ENST00000591519 NHP2Q9NX24 153 aaKnown RBP5.76□□□□□ -1.49
VPS4B-207ENST00000591519 UQCR10Q9UDW1 63 aa5.76□□□□□ -1.49
VPS4B-207ENST00000591519 A0A0B4J2C4 111 aa5.75□□□□□ -1.49
VPS4B-207ENST00000591519 hADV29S1A0JD25 119 aa5.75□□□□□ -1.49
VPS4B-207ENST00000591519 HSD52Q0P140 79 aa5.75□□□□□ -1.49
VPS4B-207ENST00000591519 K7ERJ3 54 aa5.74□□□□□ -1.49
VPS4B-207ENST00000591519 BVES-AS1Q5T3Y7 98 aa5.74□□□□□ -1.49
VPS4B-207ENST00000591519 Q6ZQY7 126 aa5.74□□□□□ -1.49
VPS4B-207ENST00000591519 A0A0G2JQZ4 141 aa5.73□□□□□ -1.49
VPS4B-207ENST00000591519 PRO1854Q9UHT4 67 aa5.73□□□□□ -1.49
VPS4B-207ENST00000591519 IGLV5-48A0A075B6I7 105 aa5.72□□□□□ -1.49
VPS4B-207ENST00000591519 SMIM29Q86T20 159 aa5.72□□□□□ -1.49
VPS4B-207ENST00000591519 F8WEM9 126 aa5.7□□□□□ -1.5
VPS4B-207ENST00000591519 FAM218AQ96MZ4 157 aa5.7□□□□□ -1.5
VPS4B-207ENST00000591519 TRIAP1O43715 76 aa5.69□□□□□ -1.5
VPS4B-207ENST00000591519 SMIM6P0DI80 62 aa5.69□□□□□ -1.5
VPS4B-207ENST00000591519 PSMB2P49721 201 aa5.69□□□□□ -1.5
VPS4B-207ENST00000591519 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.69□□□□□ -1.5
VPS4B-207ENST00000591519 H0YGX0 51 aa5.68□□□□□ -1.5
VPS4B-207ENST00000591519 KRTAP19-2Q3LHN2 52 aa5.68□□□□□ -1.5
VPS4B-207ENST00000591519 CLEC2BQ92478 149 aa5.68□□□□□ -1.5
VPS4B-207ENST00000591519 LIMD2Q9BT23 127 aa5.68□□□□□ -1.5
VPS4B-207ENST00000591519 FSIP2Q5CZC0 6907 aa5.68□□□□□ -1.5
VPS4B-207ENST00000591519 LOC105371267A0A1B0GV96 52 aa5.67□□□□□ -1.5
VPS4B-207ENST00000591519 SNCGO76070 127 aa5.67□□□□□ -1.5
VPS4B-207ENST00000591519 SNHG12Q9BXW3 62 aa5.67□□□□□ -1.5
VPS4B-207ENST00000591519 CD164Q04900 197 aa5.66□□□□□ -1.5
VPS4B-207ENST00000591519 H3BUT2 72 aa5.65□□□□□ -1.5
VPS4B-207ENST00000591519 Q5XG85 94 aa5.65□□□□□ -1.5
VPS4B-207ENST00000591519 PCOTHQ58A44 107 aa5.64□□□□□ -1.51
VPS4B-207ENST00000591519 FABP2P12104 132 aa5.63□□□□□ -1.51
VPS4B-207ENST00000591519 OCIAD2Q56VL3 154 aa5.63□□□□□ -1.51
VPS4B-207ENST00000591519 A0A1B0GV72 72 aa5.62□□□□□ -1.51
VPS4B-207ENST00000591519 COX6CP09669 75 aa5.62□□□□□ -1.51
VPS4B-207ENST00000591519 SCGB1C2P0DMR2 95 aa5.62□□□□□ -1.51
VPS4B-207ENST00000591519 MT1HP80294 61 aa5.62□□□□□ -1.51
VPS4B-207ENST00000591519 IGFL1Q6UW32 110 aa5.62□□□□□ -1.51
VPS4B-207ENST00000591519 NAA38Q9BRA0 125 aaKnown RBP5.62□□□□□ -1.51
VPS4B-207ENST00000591519 IGLV8-61A0A075B6I0 122 aa5.61□□□□□ -1.51
VPS4B-207ENST00000591519 TSTD3H0UI37 97 aa5.61□□□□□ -1.51
VPS4B-207ENST00000591519 M0R143 59 aa5.61□□□□□ -1.51
VPS4B-207ENST00000591519 DNAL4O96015 105 aa5.61□□□□□ -1.51
VPS4B-207ENST00000591519 BATFQ16520 125 aa5.61□□□□□ -1.51
VPS4B-207ENST00000591519 PPDPFLQ8WWR9 84 aa5.61□□□□□ -1.51
VPS4B-207ENST00000591519 A0A1B0GX51 115 aa5.6□□□□□ -1.51
VPS4B-207ENST00000591519 C9orf92A6NGG3 77 aa5.6□□□□□ -1.51
VPS4B-207ENST00000591519 NDUFV3P56181 108 aaKnown RBP5.6□□□□□ -1.51
VPS4B-207ENST00000591519 Q6JHZ5 121 aa5.6□□□□□ -1.51
VPS4B-207ENST00000591519 CRCT1Q9UGL9 99 aa5.6□□□□□ -1.51
VPS4B-207ENST00000591519 C1orf195Q5TG92 126 aa5.59□□□□□ -1.51
VPS4B-207ENST00000591519 ORMDL1Q9P0S3 153 aa5.59□□□□□ -1.51
VPS4B-207ENST00000591519 H3BMG7 143 aa5.58□□□□□ -1.52
VPS4B-207ENST00000591519 TRBV7-7A0A0K0K1E9 115 aa5.57□□□□□ -1.52
VPS4B-207ENST00000591519 TCL1BO95988 128 aa5.57□□□□□ -1.52
VPS4B-207ENST00000591519 LST1O00453 97 aa5.54□□□□□ -1.52
VPS4B-207ENST00000591519 RPL37P61927 97 aaKnown RBP5.54□□□□□ -1.52
VPS4B-207ENST00000591519 TRACP01848 142 aa5.53□□□□□ -1.52
VPS4B-207ENST00000591519 KRTAP10-6P60371 365 aaPredicted RBP5.53□□□□□ -1.52
VPS4B-207ENST00000591519 TMEM256-PLSCR3K7ERE1 68 aa5.52□□□□□ -1.53
VPS4B-207ENST00000591519 ANKRD29Q8N6D5 301 aa5.52□□□□□ -1.53
VPS4B-207ENST00000591519 A0A087WSZ3 146 aa5.51□□□□□ -1.53
VPS4B-207ENST00000591519 H3BQ85 93 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms