RNA–Protein interactions for RNA: ENST00000591475.5

VPS4B-206, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 1 (best)

Gene VPS4B, Length 2,008 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-206ENST00000591475 REG3GQ6UW15 175 aa6.91□□□□□ -1.3
VPS4B-206ENST00000591475 CSMD3Q7Z407 3707 aa6.9□□□□□ -1.3
VPS4B-206ENST00000591475 K7EQZ3 153 aa6.89□□□□□ -1.31
VPS4B-206ENST00000591475 DNAH7Q8WXX0 4024 aa6.89□□□□□ -1.31
VPS4B-206ENST00000591475 LINC00476Q8WZB0 136 aa6.89□□□□□ -1.31
VPS4B-206ENST00000591475 MPLKIPQ8TAP9 179 aa6.88□□□□□ -1.31
VPS4B-206ENST00000591475 APLNQ9ULZ1 77 aa6.88□□□□□ -1.31
VPS4B-206ENST00000591475 HCG22E2RYF7 251 aa6.87□□□□□ -1.31
VPS4B-206ENST00000591475 ZCCHC13Q8WW36 166 aaKnown RBP6.87□□□□□ -1.31
VPS4B-206ENST00000591475 DYNC2H1Q8NCM8 4307 aaKnown RBP6.87□□□□□ -1.31
VPS4B-206ENST00000591475 TENM2Q9NT68 2774 aa6.86□□□□□ -1.31
VPS4B-206ENST00000591475 PSCAO43653 123 aa6.86□□□□□ -1.31
VPS4B-206ENST00000591475 WWC2-AS2Q96NR7 200 aa6.86□□□□□ -1.31
VPS4B-206ENST00000591475 DNAH1Q9P2D7 4330 aa6.85□□□□□ -1.31
VPS4B-206ENST00000591475 hDV103S1A0JD37 113 aa6.85□□□□□ -1.31
VPS4B-206ENST00000591475 IGFL1Q6UW32 110 aa6.85□□□□□ -1.31
VPS4B-206ENST00000591475 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.84□□□□□ -1.31
VPS4B-206ENST00000591475 BRK1Q8WUW1 75 aa6.84□□□□□ -1.31
VPS4B-206ENST00000591475 UBE2DNLQ8IWF7 75 aa6.83□□□□□ -1.32
VPS4B-206ENST00000591475 LYSTQ99698 3801 aa6.83□□□□□ -1.32
VPS4B-206ENST00000591475 IGLV8-61A0A075B6I0 122 aa6.83□□□□□ -1.32
VPS4B-206ENST00000591475 STARD9Q9P2P6 4700 aa6.82□□□□□ -1.32
VPS4B-206ENST00000591475 A0A0G2JQZ4 141 aa6.82□□□□□ -1.32
VPS4B-206ENST00000591475 A0A1W2PNN7 141 aa6.82□□□□□ -1.32
VPS4B-206ENST00000591475 C1orf64Q8NEQ6 169 aa6.82□□□□□ -1.32
VPS4B-206ENST00000591475 PLECQ15149 4684 aaKnown RBP6.82□□□□□ -1.32
VPS4B-206ENST00000591475 PRLHP81277 87 aa6.81□□□□□ -1.32
VPS4B-206ENST00000591475 A0A087WSZ3 146 aa6.8□□□□□ -1.32
VPS4B-206ENST00000591475 A0A096LNI7 61 aa6.8□□□□□ -1.32
VPS4B-206ENST00000591475 C16orf90A8MZG2 172 aa6.8□□□□□ -1.32
VPS4B-206ENST00000591475 NDUFB1O75438 58 aa6.8□□□□□ -1.32
VPS4B-206ENST00000591475 DEFB116Q30KQ4 102 aa6.8□□□□□ -1.32
VPS4B-206ENST00000591475 CYP4F30PQ9H0H9 118 aa6.8□□□□□ -1.32
VPS4B-206ENST00000591475 IGKV2-24A0A0C4DH68 120 aa6.79□□□□□ -1.32
VPS4B-206ENST00000591475 WFDC13Q8IUB5 93 aa6.79□□□□□ -1.32
VPS4B-206ENST00000591475 UBE2AP49459 152 aa6.79□□□□□ -1.32
VPS4B-206ENST00000591475 MP68P56378 58 aa6.79□□□□□ -1.32
VPS4B-206ENST00000591475 Q1T7F1 81 aa6.78□□□□□ -1.32
VPS4B-206ENST00000591475 CNBPP62633 177 aaKnown RBP6.77□□□□□ -1.32
VPS4B-206ENST00000591475 LRCOL1A6NCL2 159 aa6.77□□□□□ -1.33
VPS4B-206ENST00000591475 PKIGQ9Y2B9 76 aa6.77□□□□□ -1.33
VPS4B-206ENST00000591475 RPL37AP61513 92 aaKnown RBP6.76□□□□□ -1.33
VPS4B-206ENST00000591475 KRTAP29-1A8MX34 341 aaPredicted RBP6.75□□□□□ -1.33
VPS4B-206ENST00000591475 TRAV22A0A0B4J277 110 aa6.74□□□□□ -1.33
VPS4B-206ENST00000591475 PRR4Q16378 134 aa6.74□□□□□ -1.33
VPS4B-206ENST00000591475 SPRR1BP22528 89 aa6.74□□□□□ -1.33
VPS4B-206ENST00000591475 CASC2Q6XLA1 102 aa6.74□□□□□ -1.33
VPS4B-206ENST00000591475 LINC00208Q96KT6 92 aa6.74□□□□□ -1.33
VPS4B-206ENST00000591475 NBDYA0A0U1RRE5 68 aa6.73□□□□□ -1.33
VPS4B-206ENST00000591475 H0Y9J4 135 aa6.73□□□□□ -1.33
VPS4B-206ENST00000591475 H3BPC8 53 aa6.72□□□□□ -1.33
VPS4B-206ENST00000591475 PRR15Q8IV56 129 aa6.72□□□□□ -1.33
VPS4B-206ENST00000591475 KRTAP1-5Q9BYS1 174 aa6.72□□□□□ -1.33
VPS4B-206ENST00000591475 VPS13DQ5THJ4 4388 aa6.72□□□□□ -1.33
VPS4B-206ENST00000591475 H0Y9P7 68 aa6.72□□□□□ -1.33
VPS4B-206ENST00000591475 C14orf177Q52M58 125 aa6.72□□□□□ -1.33
VPS4B-206ENST00000591475 C4orf48Q5BLP8 95 aa6.72□□□□□ -1.33
VPS4B-206ENST00000591475 PHF5AQ7RTV0 110 aaKnown RBP6.72□□□□□ -1.33
VPS4B-206ENST00000591475 A8MWP4 228 aa6.71□□□□□ -1.33
VPS4B-206ENST00000591475 LINC00472Q9H8W2 130 aa6.71□□□□□ -1.34
VPS4B-206ENST00000591475 LY6G6CO95867 125 aa6.7□□□□□ -1.34
VPS4B-206ENST00000591475 C1orf195Q5TG92 126 aa6.7□□□□□ -1.34
VPS4B-206ENST00000591475 KRTAP11-1Q8IUC1 163 aa6.7□□□□□ -1.34
VPS4B-206ENST00000591475 SPANXA2-OT1Q8N9U9 137 aa6.7□□□□□ -1.34
VPS4B-206ENST00000591475 CHTF8P0CG12 524 aa6.69□□□□□ -1.34
VPS4B-206ENST00000591475 V9GYY9 64 aa6.69□□□□□ -1.34
VPS4B-206ENST00000591475 DNAH10Q8IVF4 4471 aa6.68□□□□□ -1.34
VPS4B-206ENST00000591475 PSPHP1O15172 72 aa6.67□□□□□ -1.34
VPS4B-206ENST00000591475 KMT2AQ03164 3969 aa6.66□□□□□ -1.34
VPS4B-206ENST00000591475 Q6ZR54 194 aa6.66□□□□□ -1.34
VPS4B-206ENST00000591475 C9orf163Q8N9P6 203 aa6.65□□□□□ -1.35
VPS4B-206ENST00000591475 MMP24-AS1A0A0U1RRL7 71 aa6.64□□□□□ -1.35
VPS4B-206ENST00000591475 Q6ZRN7 208 aaPredicted RBP6.63□□□□□ -1.35
VPS4B-206ENST00000591475 A8MUN3 132 aa6.62□□□□□ -1.35
VPS4B-206ENST00000591475 ALMS1Q8TCU4 4167 aa6.62□□□□□ -1.35
VPS4B-206ENST00000591475 C1orf134Q5TEV5 83 aa6.62□□□□□ -1.35
VPS4B-206ENST00000591475 SRRM2Q9UQ35 2752 aaKnown RBP6.62□□□□□ -1.35
VPS4B-206ENST00000591475 KRTAP13-1Q8IUC0 172 aa6.61□□□□□ -1.35
VPS4B-206ENST00000591475 LIMD2Q9BT23 127 aa6.6□□□□□ -1.35
VPS4B-206ENST00000591475 DNAH2Q9P225 4427 aa6.6□□□□□ -1.35
VPS4B-206ENST00000591475 Q5VV11 94 aa6.59□□□□□ -1.36
VPS4B-206ENST00000591475 Q8N9P0 234 aaPredicted RBP6.59□□□□□ -1.36
VPS4B-206ENST00000591475 DNAH6Q9C0G6 4158 aa6.59□□□□□ -1.36
VPS4B-206ENST00000591475 MOBPQ13875 183 aa6.58□□□□□ -1.36
VPS4B-206ENST00000591475 TP53AIP1Q9HCN2 124 aa6.58□□□□□ -1.36
VPS4B-206ENST00000591475 IGLV7-46A0A075B6I9 117 aa6.57□□□□□ -1.36
VPS4B-206ENST00000591475 IGLV9-49A0A0B4J1Y8 123 aa6.57□□□□□ -1.36
VPS4B-206ENST00000591475 Q96NJ1 140 aa6.57□□□□□ -1.36
VPS4B-206ENST00000591475 PANO1I0J062 215 aa6.57□□□□□ -1.36
VPS4B-206ENST00000591475 ASB16-AS1Q495Z4 193 aa6.56□□□□□ -1.36
VPS4B-206ENST00000591475 COA5Q86WW8 74 aa6.56□□□□□ -1.36
VPS4B-206ENST00000591475 HYDINQ4G0P3 5121 aa6.56□□□□□ -1.36
VPS4B-206ENST00000591475 A0A087WTM6 91 aa6.55□□□□□ -1.36
VPS4B-206ENST00000591475 SACSQ9NZJ4 4579 aa6.55□□□□□ -1.36
VPS4B-206ENST00000591475 PRR15LQ9BU68 103 aa6.55□□□□□ -1.36
VPS4B-206ENST00000591475 C8orf17Q9NRJ1 99 aa6.55□□□□□ -1.36
VPS4B-206ENST00000591475 LINC00483Q53H64 154 aa6.54□□□□□ -1.36
VPS4B-206ENST00000591475 CHKB-CPT1BH3BT56 60 aa6.54□□□□□ -1.36
VPS4B-206ENST00000591475 SPACA4Q8TDM5 124 aa6.54□□□□□ -1.36
VPS4B-206ENST00000591475 PMAIP1Q13794 54 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms